RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
NPC1L1-203ENST00000423141 DMTNQ08495 405 aa20.18■□□□□ 0.82
NPC1L1-203ENST00000423141 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
NPC1L1-203ENST00000423141 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 IL25Q9H293 177 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 HMMRO75330 724 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 MCCP23508 829 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 CHMLP26374 656 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 G2E3Q7L622 706 aa20.17■□□□□ 0.82
NPC1L1-203ENST00000423141 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.821e-7■■■■■ 30
NPC1L1-203ENST00000423141 HMGN5P82970 282 aaKnown RBP20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 ATP2B3Q16720 1220 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 UNC5CLQ8IV45 518 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 MIS18AQ9NYP9 233 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 PTPRCP08575 1304 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 SALL3Q9BXA9 1300 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 CHL1O00533 1208 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 FAM184AQ8NB25 1140 aa20.16■□□□□ 0.82
NPC1L1-203ENST00000423141 UVSSAQ2YD98 709 aa20.15■□□□□ 0.82
NPC1L1-203ENST00000423141 PPP4R3BQ5MIZ7 849 aa20.15■□□□□ 0.82
NPC1L1-203ENST00000423141 RPAP1Q9BWH6 1393 aaPredicted RBP20.15■□□□□ 0.82
NPC1L1-203ENST00000423141 WDR33Q9C0J8 1336 aaKnown RBP20.14■□□□□ 0.82
NPC1L1-203ENST00000423141 MX1P20591 662 aa20.14■□□□□ 0.82
NPC1L1-203ENST00000423141 PLCB2Q00722 1185 aa20.14■□□□□ 0.82
NPC1L1-203ENST00000423141 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.82
NPC1L1-203ENST00000423141 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.82
NPC1L1-203ENST00000423141 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
NPC1L1-203ENST00000423141 ATP7BP35670 1465 aa20.14■□□□□ 0.81
NPC1L1-203ENST00000423141 RAPGEF3O95398 923 aa20.14■□□□□ 0.81
NPC1L1-203ENST00000423141 ANAPC15P60006 121 aa20.14■□□□□ 0.81
NPC1L1-203ENST00000423141 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
NPC1L1-203ENST00000423141 KIAA0232Q92628 1395 aa20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 LARP6Q9BRS8 491 aaKnown RBP20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 SPTLC3Q9NUV7 552 aa20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 KIF3AQ9Y496 699 aa20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 DTNBO60941 627 aa20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
NPC1L1-203ENST00000423141 AP5Z1O43299 807 aa20.12■□□□□ 0.81
NPC1L1-203ENST00000423141 UTP14CQ5TAP6 766 aaKnown RBP20.12■□□□□ 0.81
NPC1L1-203ENST00000423141 ALKQ9UM73 1620 aa20.12■□□□□ 0.81
NPC1L1-203ENST00000423141 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
NPC1L1-203ENST00000423141 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
NPC1L1-203ENST00000423141 TMEM131LA2VDJ0 1609 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 KDM4AO75164 1064 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 TMEM87AQ8NBN3 555 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 COG3Q96JB2 828 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 KCNF1Q9H3M0 494 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 PYCARDQ9ULZ3 195 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 GIMAP6Q6P9H5 292 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
NPC1L1-203ENST00000423141 SPDYE4A6NLX3 237 aa20.09■□□□□ 0.81
NPC1L1-203ENST00000423141 FIBPO43427 364 aa20.09■□□□□ 0.81
NPC1L1-203ENST00000423141 PODXL2Q9NZ53 605 aa20.09■□□□□ 0.81
NPC1L1-203ENST00000423141 GNAI2P04899 355 aa20.09■□□□□ 0.81
NPC1L1-203ENST00000423141 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
NPC1L1-203ENST00000423141 CPS1P31327 1500 aa20.08■□□□□ 0.81
NPC1L1-203ENST00000423141 EIF4A2Q14240 407 aaKnown RBP20.08■□□□□ 0.8
NPC1L1-203ENST00000423141 FBXO31Q5XUX0 539 aaPredicted RBP20.08■□□□□ 0.8
NPC1L1-203ENST00000423141 RIOK3O14730 519 aaKnown RBP20.07■□□□□ 0.8
NPC1L1-203ENST00000423141 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
NPC1L1-203ENST00000423141 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
NPC1L1-203ENST00000423141 SPC24Q8NBT2 197 aa20.07■□□□□ 0.8
NPC1L1-203ENST00000423141 KIAA1524Q8TCG1 905 aa20.07■□□□□ 0.8
NPC1L1-203ENST00000423141 FUCA2Q9BTY2 467 aa20.07■□□□□ 0.8
NPC1L1-203ENST00000423141 UBE2HP62256 183 aa20.06■□□□□ 0.8
NPC1L1-203ENST00000423141 SYT1P21579 422 aa20.06■□□□□ 0.8
NPC1L1-203ENST00000423141 HSPA4P34932 840 aa20.06■□□□□ 0.8
NPC1L1-203ENST00000423141 CCT4P50991 539 aaKnown RBP20.06■□□□□ 0.8
NPC1L1-203ENST00000423141 IL17RAQ96F46 866 aa20.06■□□□□ 0.8
NPC1L1-203ENST00000423141 SSH2Q76I76 1423 aa20.06■□□□□ 0.8
NPC1L1-203ENST00000423141 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
NPC1L1-203ENST00000423141 IL1RAPL2Q9NP60 686 aa20.05■□□□□ 0.8
NPC1L1-203ENST00000423141 STX6O43752 255 aa20.04■□□□□ 0.8
NPC1L1-203ENST00000423141 PDCL2Q8N4E4 241 aa20.04■□□□□ 0.8
NPC1L1-203ENST00000423141 FOXO3O43524 673 aa20.04■□□□□ 0.8
NPC1L1-203ENST00000423141 U2AF2P26368 475 aaKnown RBP eCLIP20.03■□□□□ 0.82e-8■□□□□ 10
NPC1L1-203ENST00000423141 AK2P54819 239 aa20.03■□□□□ 0.8
NPC1L1-203ENST00000423141 CRB1P82279 1406 aa20.03■□□□□ 0.8
NPC1L1-203ENST00000423141 A0A0U1RQG5 324 aaPredicted RBP20.03■□□□□ 0.8
NPC1L1-203ENST00000423141 LETM1O95202 739 aaPredicted RBP20.03■□□□□ 0.8
NPC1L1-203ENST00000423141 CPA1P15085 419 aa20.03■□□□□ 0.8
NPC1L1-203ENST00000423141 STAP2Q9UGK3 403 aa20.03■□□□□ 0.8
NPC1L1-203ENST00000423141 F13A1P00488 732 aa20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 NUTM1Q86Y26 1132 aa20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 RASEFQ8IZ41 740 aa20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 WASLO00401 505 aaPredicted RBP20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 TTC14Q96N46 770 aa20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 SNX14Q9Y5W7 946 aa20.02■□□□□ 0.8
NPC1L1-203ENST00000423141 IGSF3O75054 1194 aa20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 LARGE1O95461 756 aa20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 DNM1Q05193 864 aaKnown RBP20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 ATP8B2P98198 1209 aa20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms