RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 RTL1A6NKG5 1358 aa3.39□□□□□ -1.87
UBE2W-202ENST00000422906 FAM161AQ3B820 660 aa3.39□□□□□ -1.87
UBE2W-202ENST00000422906 PLXNA1Q9UIW2 1896 aa3.38□□□□□ -1.87
UBE2W-202ENST00000422906 PIP4P2Q8N4L2 257 aa3.38□□□□□ -1.87
UBE2W-202ENST00000422906 ABHD8Q96I13 439 aa3.38□□□□□ -1.87
UBE2W-202ENST00000422906 A0A1W2PPC1 479 aa3.38□□□□□ -1.87
UBE2W-202ENST00000422906 EN1Q05925 392 aaPredicted RBP3.38□□□□□ -1.87
UBE2W-202ENST00000422906 KCNH6Q9H252 994 aa3.38□□□□□ -1.87
UBE2W-202ENST00000422906 KIF24Q5T7B8 1368 aa3.37□□□□□ -1.87
UBE2W-202ENST00000422906 ZFHX3Q15911 3703 aa3.37□□□□□ -1.87
UBE2W-202ENST00000422906 LAMA3Q16787 3333 aa3.37□□□□□ -1.87
UBE2W-202ENST00000422906 ATAD5Q96QE3 1844 aa3.37□□□□□ -1.87
UBE2W-202ENST00000422906 PRDM6Q9NQX0 595 aa3.37□□□□□ -1.87
UBE2W-202ENST00000422906 ESF1Q9H501 851 aaKnown RBP3.37□□□□□ -1.87
UBE2W-202ENST00000422906 NKX1-1Q15270 411 aaPredicted RBP3.37□□□□□ -1.87
UBE2W-202ENST00000422906 MTFR1LQ9H019 292 aa3.37□□□□□ -1.87
UBE2W-202ENST00000422906 CNTNAP1P78357 1384 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 ERBB3P21860 1342 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 COL26A1Q96A83 441 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 C8orf37Q96NL8 207 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 AXIN2Q9Y2T1 843 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 EID1Q9Y6B2 187 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 HAX1O00165 279 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 HSPA1AP0DMV8 641 aaKnown RBP3.36□□□□□ -1.87
UBE2W-202ENST00000422906 HSPA1BP0DMV9 641 aaKnown RBP3.36□□□□□ -1.87
UBE2W-202ENST00000422906 SLC16A10Q8TF71 515 aa3.36□□□□□ -1.87
UBE2W-202ENST00000422906 AK9Q5TCS8 1911 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 WDR17Q8IZU2 1322 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 CCDC7Q96M83 1385 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 NLGN2Q8NFZ4 835 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 POTEMA6NI47 508 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 SLC15A2Q16348 729 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 FAM196AQ6ZSG2 479 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 ZNF579Q8NAF0 562 aaKnown RBP3.35□□□□□ -1.87
UBE2W-202ENST00000422906 LAMA2P24043 3122 aaKnown RBP3.35□□□□□ -1.87
UBE2W-202ENST00000422906 AKAP9Q99996 3911 aa3.35□□□□□ -1.87
UBE2W-202ENST00000422906 FMR1Q06787 632 aaKnown RBP eCLIP3.35□□□□□ -1.87
UBE2W-202ENST00000422906 R3HDM1Q15032 1099 aaKnown RBP3.35□□□□□ -1.87
UBE2W-202ENST00000422906 FHDC1Q9C0D6 1143 aaPredicted RBP3.35□□□□□ -1.87
UBE2W-202ENST00000422906 A0A1W2PP64 1363 aa3.34□□□□□ -1.87
UBE2W-202ENST00000422906 USP47Q96K76 1375 aa3.34□□□□□ -1.87
UBE2W-202ENST00000422906 DCAF5Q96JK2 942 aa3.34□□□□□ -1.87
UBE2W-202ENST00000422906 GREB1LQ9C091 1923 aaPredicted RBP3.34□□□□□ -1.88
UBE2W-202ENST00000422906 LTBP3Q9NS15 1303 aa3.34□□□□□ -1.88
UBE2W-202ENST00000422906 PITPNM1O00562 1244 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 HABP4Q5JVS0 413 aaKnown RBP3.33□□□□□ -1.88
UBE2W-202ENST00000422906 ARHGEF25Q86VW2 580 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 LCTP09848 1927 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 NBPF19A0A087WUL8 3843 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 CA12O43570 354 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 POLA2Q14181 598 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 MPNDQ8N594 471 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 CFHR5Q9BXR6 569 aa3.33□□□□□ -1.88
UBE2W-202ENST00000422906 UBE2Q1Q7Z7E8 422 aa3.32□□□□□ -1.88
UBE2W-202ENST00000422906 EDC4Q6P2E9 1401 aaKnown RBP3.32□□□□□ -1.88
UBE2W-202ENST00000422906 KLRG2A4D1S0 409 aaPredicted RBP3.32□□□□□ -1.88
UBE2W-202ENST00000422906 POTEGQ6S5H5 508 aa3.32□□□□□ -1.88
UBE2W-202ENST00000422906 PPP1R1BQ9UD71 204 aaPredicted RBP3.32□□□□□ -1.88
UBE2W-202ENST00000422906 POLR2AP24928 1970 aaKnown RBP3.32□□□□□ -1.88
UBE2W-202ENST00000422906 FAM122AQ96E09 287 aa3.32□□□□□ -1.88
UBE2W-202ENST00000422906 P2RX7Q99572 595 aaKnown RBP3.32□□□□□ -1.88
UBE2W-202ENST00000422906 CD2APQ9Y5K6 639 aa3.32□□□□□ -1.88
UBE2W-202ENST00000422906 COL4A2P08572 1712 aa3.32□□□□□ -1.88
UBE2W-202ENST00000422906 PSDA5PKW4 1024 aaPredicted RBP3.31□□□□□ -1.88
UBE2W-202ENST00000422906 ERBB4Q15303 1308 aa3.31□□□□□ -1.88
UBE2W-202ENST00000422906 NBPF15Q8N660 670 aa3.31□□□□□ -1.88
UBE2W-202ENST00000422906 PUS7Q96PZ0 661 aaKnown RBP3.31□□□□□ -1.88
UBE2W-202ENST00000422906 CARD10Q9BWT7 1032 aa3.31□□□□□ -1.88
UBE2W-202ENST00000422906 PGAP2Q9UHJ9 254 aa3.31□□□□□ -1.88
UBE2W-202ENST00000422906 TANC1Q9C0D5 1861 aa3.31□□□□□ -1.88
UBE2W-202ENST00000422906 SPEGQ15772 3267 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 HEG1Q9ULI3 1381 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 GPBP1L1Q9HC44 474 aaPredicted RBP3.3□□□□□ -1.88
UBE2W-202ENST00000422906 SLC27A3Q5K4L6 730 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 ASTLQ6HA08 431 aaPredicted RBP3.3□□□□□ -1.88
UBE2W-202ENST00000422906 ASPMQ8IZT6 3477 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 POTEIP0CG38 1075 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 MAP3K11Q16584 847 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 C7orf43Q8WVR3 580 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 DENND4AQ7Z401 1863 aa3.3□□□□□ -1.88
UBE2W-202ENST00000422906 SLC4A9Q96Q91 983 aa3.29□□□□□ -1.88
UBE2W-202ENST00000422906 LARP1Q6PKG0 1096 aaKnown RBP3.29□□□□□ -1.88
UBE2W-202ENST00000422906 ANKRD13DQ6ZTN6 518 aa3.29□□□□□ -1.88
UBE2W-202ENST00000422906 SMC1BQ8NDV3 1235 aa3.29□□□□□ -1.88
UBE2W-202ENST00000422906 L3MBTL3Q96JM7 780 aaPredicted RBP3.29□□□□□ -1.88
UBE2W-202ENST00000422906 KIAA1549LQ6ZVL6 1849 aa3.29□□□□□ -1.88
UBE2W-202ENST00000422906 KRT28Q7Z3Y7 464 aa3.29□□□□□ -1.88
UBE2W-202ENST00000422906 NAV1Q8NEY1 1877 aa3.29□□□□□ -1.88
UBE2W-202ENST00000422906 ITGBL1O95965 494 aaPredicted RBP3.28□□□□□ -1.88
UBE2W-202ENST00000422906 NUBP1P53384 320 aa3.28□□□□□ -1.88
UBE2W-202ENST00000422906 SIP14410 1827 aa3.28□□□□□ -1.88
UBE2W-202ENST00000422906 COL4A3Q01955 1670 aa3.28□□□□□ -1.88
UBE2W-202ENST00000422906 RASSF10A6NK89 507 aa3.28□□□□□ -1.88
UBE2W-202ENST00000422906 HSPA8P11142 646 aaKnown RBP3.28□□□□□ -1.88
UBE2W-202ENST00000422906 ATF3P18847 181 aa3.28□□□□□ -1.88
UBE2W-202ENST00000422906 FXR1P51114 621 aaKnown RBP eCLIP3.28□□□□□ -1.88
UBE2W-202ENST00000422906 SYMPKQ92797 1274 aaKnown RBP3.28□□□□□ -1.88
UBE2W-202ENST00000422906 WBP1LQ9NX94 342 aa3.28□□□□□ -1.88
UBE2W-202ENST00000422906 WASLO00401 505 aaPredicted RBP3.27□□□□□ -1.89
UBE2W-202ENST00000422906 TCP11L2Q8N4U5 519 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms