RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 KDM3BQ7LBC6 1761 aa17.16■□□□□ 0.34
CDCA3-202ENST00000422785 RBM25P49756 843 aaKnown RBP17.16■□□□□ 0.34
CDCA3-202ENST00000422785 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
CDCA3-202ENST00000422785 NCOA3Q9Y6Q9 1424 aa17.16■□□□□ 0.34
CDCA3-202ENST00000422785 ALS2Q96Q42 1657 aa17.16■□□□□ 0.34
CDCA3-202ENST00000422785 HOXB7P09629 217 aa17.16■□□□□ 0.34
CDCA3-202ENST00000422785 DCCP43146 1447 aa17.16■□□□□ 0.34
CDCA3-202ENST00000422785 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
CDCA3-202ENST00000422785 GNAI2P04899 355 aa17.15■□□□□ 0.34
CDCA3-202ENST00000422785 ATF3P18847 181 aa17.15■□□□□ 0.34
CDCA3-202ENST00000422785 EIF4A1P60842 406 aaKnown RBP17.15■□□□□ 0.34
CDCA3-202ENST00000422785 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
CDCA3-202ENST00000422785 CHMP4AQ9BY43 222 aa17.15■□□□□ 0.34
CDCA3-202ENST00000422785 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
CDCA3-202ENST00000422785 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
CDCA3-202ENST00000422785 GNAI3P08754 354 aa17.14■□□□□ 0.33
CDCA3-202ENST00000422785 TBC1D9Q6ZT07 1266 aa17.14■□□□□ 0.33
CDCA3-202ENST00000422785 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
CDCA3-202ENST00000422785 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
CDCA3-202ENST00000422785 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
CDCA3-202ENST00000422785 TEFQ10587 303 aa17.13■□□□□ 0.33
CDCA3-202ENST00000422785 CDC45O75419 566 aa17.13■□□□□ 0.33
CDCA3-202ENST00000422785 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
CDCA3-202ENST00000422785 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
CDCA3-202ENST00000422785 TTC22Q5TAA0 569 aa17.13■□□□□ 0.33
CDCA3-202ENST00000422785 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
CDCA3-202ENST00000422785 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
CDCA3-202ENST00000422785 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
CDCA3-202ENST00000422785 PXDNQ92626 1479 aa17.12■□□□□ 0.33
CDCA3-202ENST00000422785 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
CDCA3-202ENST00000422785 RNMTO43148 476 aaKnown RBP17.11■□□□□ 0.33
CDCA3-202ENST00000422785 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
CDCA3-202ENST00000422785 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
CDCA3-202ENST00000422785 LMTK3Q96Q04 1460 aa17.11■□□□□ 0.33
CDCA3-202ENST00000422785 ERBB3P21860 1342 aa17.1■□□□□ 0.33
CDCA3-202ENST00000422785 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
CDCA3-202ENST00000422785 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
CDCA3-202ENST00000422785 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
CDCA3-202ENST00000422785 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
CDCA3-202ENST00000422785 KCNQ3O43525 872 aa17.09■□□□□ 0.33
CDCA3-202ENST00000422785 OTUD7AQ8TE49 926 aaPredicted RBP17.09■□□□□ 0.33
CDCA3-202ENST00000422785 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
CDCA3-202ENST00000422785 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
CDCA3-202ENST00000422785 ATP8B2P98198 1209 aa17.09■□□□□ 0.33
CDCA3-202ENST00000422785 APBB1O00213 710 aa17.08■□□□□ 0.33
CDCA3-202ENST00000422785 CADPS2Q86UW7 1296 aa17.08■□□□□ 0.33
CDCA3-202ENST00000422785 USP44Q9H0E7 712 aa17.08■□□□□ 0.33
CDCA3-202ENST00000422785 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
CDCA3-202ENST00000422785 SNX21Q969T3 373 aa17.07■□□□□ 0.32
CDCA3-202ENST00000422785 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
CDCA3-202ENST00000422785 NPHP3Q7Z494 1330 aa17.07■□□□□ 0.32
CDCA3-202ENST00000422785 ADAMTS7Q9UKP4 1686 aa17.07■□□□□ 0.32
CDCA3-202ENST00000422785 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
CDCA3-202ENST00000422785 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
CDCA3-202ENST00000422785 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
CDCA3-202ENST00000422785 DDX17Q92841 729 aaKnown RBP17.06■□□□□ 0.32
CDCA3-202ENST00000422785 KIF2CQ99661 725 aa17.06■□□□□ 0.32
CDCA3-202ENST00000422785 SRCIN1Q9C0H9 1055 aa17.06■□□□□ 0.32
CDCA3-202ENST00000422785 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
CDCA3-202ENST00000422785 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
CDCA3-202ENST00000422785 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
CDCA3-202ENST00000422785 PNMA6EA0A0J9YXQ4 647 aa17.05■□□□□ 0.32
CDCA3-202ENST00000422785 SDSP20132 328 aa17.05■□□□□ 0.32
CDCA3-202ENST00000422785 EXOC6BQ9Y2D4 811 aa17.05■□□□□ 0.32
CDCA3-202ENST00000422785 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
CDCA3-202ENST00000422785 COL18A1P39060 1754 aa17.04■□□□□ 0.32
CDCA3-202ENST00000422785 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
CDCA3-202ENST00000422785 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
CDCA3-202ENST00000422785 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
CDCA3-202ENST00000422785 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
CDCA3-202ENST00000422785 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
CDCA3-202ENST00000422785 PDE1AP54750 535 aa17.03■□□□□ 0.32
CDCA3-202ENST00000422785 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
CDCA3-202ENST00000422785 ABCC6O95255 1503 aa17.03■□□□□ 0.32
CDCA3-202ENST00000422785 NLRP2Q9NX02 1062 aa17.03■□□□□ 0.32
CDCA3-202ENST00000422785 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.32
CDCA3-202ENST00000422785 BEND3Q5T5X7 828 aa17.02■□□□□ 0.32
CDCA3-202ENST00000422785 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
CDCA3-202ENST00000422785 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.32
CDCA3-202ENST00000422785 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
CDCA3-202ENST00000422785 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.31
CDCA3-202ENST00000422785 HSPA2P54652 639 aa17.01■□□□□ 0.31
CDCA3-202ENST00000422785 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
CDCA3-202ENST00000422785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDCA3-202ENST00000422785 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
CDCA3-202ENST00000422785 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
CDCA3-202ENST00000422785 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
CDCA3-202ENST00000422785 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
CDCA3-202ENST00000422785 ADCY9O60503 1353 aa17■□□□□ 0.31
CDCA3-202ENST00000422785 SPG7Q9UQ90 795 aa17■□□□□ 0.31
CDCA3-202ENST00000422785 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
CDCA3-202ENST00000422785 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
CDCA3-202ENST00000422785 ANXA1P04083 346 aa16.99■□□□□ 0.31
CDCA3-202ENST00000422785 POLA2Q14181 598 aa16.99■□□□□ 0.31
CDCA3-202ENST00000422785 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
CDCA3-202ENST00000422785 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
CDCA3-202ENST00000422785 GSE1Q14687 1217 aa16.99■□□□□ 0.31
CDCA3-202ENST00000422785 CPDO75976 1380 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 PHKG2P15735 406 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 MX1P20591 662 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms