RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
SSPN-202ENST00000422622 C16orf71Q8IYS4 520 aaPredicted RBP12.39□□□□□ -0.43
SSPN-202ENST00000422622 CCDC85AQ96PX6 553 aaPredicted RBP12.39□□□□□ -0.43
SSPN-202ENST00000422622 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
SSPN-202ENST00000422622 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
SSPN-202ENST00000422622 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
SSPN-202ENST00000422622 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
SSPN-202ENST00000422622 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 GNAI2P04899 355 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 UBR1Q8IWV7 1749 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 SEC24BO95487 1268 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 PIK3R4Q99570 1358 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 UBE2Q2Q8WVN8 375 aa12.38□□□□□ -0.43
SSPN-202ENST00000422622 CDK12Q9NYV4 1490 aaPredicted RBP12.37□□□□□ -0.43
SSPN-202ENST00000422622 NEXNQ0ZGT2 675 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
SSPN-202ENST00000422622 KCNA4P22459 653 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
SSPN-202ENST00000422622 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
SSPN-202ENST00000422622 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
SSPN-202ENST00000422622 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
SSPN-202ENST00000422622 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
SSPN-202ENST00000422622 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
SSPN-202ENST00000422622 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 NPHP1O15259 732 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
SSPN-202ENST00000422622 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 ARHGEF10O15013 1369 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
SSPN-202ENST00000422622 ZNF853P0CG23 659 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
SSPN-202ENST00000422622 USP19O94966 1318 aa12.35□□□□□ -0.43
SSPN-202ENST00000422622 GNAI3P08754 354 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 UBAP1LF5GYI3 381 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
SSPN-202ENST00000422622 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
SSPN-202ENST00000422622 ACSBG1Q96GR2 724 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 MAP2P11137 1827 aaKnown RBP12.34□□□□□ -0.43
SSPN-202ENST00000422622 LMTK3Q96Q04 1460 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
SSPN-202ENST00000422622 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.43
SSPN-202ENST00000422622 ARHGAP23Q9P227 1491 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 MYD88Q99836 296 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
SSPN-202ENST00000422622 CDK11BP21127 795 aaKnown RBP12.33□□□□□ -0.44
SSPN-202ENST00000422622 ERBB3P21860 1342 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 KCNJ4P48050 445 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
SSPN-202ENST00000422622 PDE4CQ08493 712 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
SSPN-202ENST00000422622 MEX3CQ5U5Q3 659 aaKnown RBP12.32□□□□□ -0.44
SSPN-202ENST00000422622 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 MED14O60244 1454 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
SSPN-202ENST00000422622 SLIT1O75093 1534 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 AAMPQ13685 434 aa12.32□□□□□ -0.44
SSPN-202ENST00000422622 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
SSPN-202ENST00000422622 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 FOXD4L5Q5VV16 416 aaPredicted RBP12.31□□□□□ -0.44
SSPN-202ENST00000422622 FOXD4L4Q8WXT5 416 aaPredicted RBP12.31□□□□□ -0.44
SSPN-202ENST00000422622 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
SSPN-202ENST00000422622 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
SSPN-202ENST00000422622 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
SSPN-202ENST00000422622 PTPRCP08575 1304 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 NGLY1Q96IV0 654 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 IQSEC2Q5JU85 1478 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
SSPN-202ENST00000422622 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
SSPN-202ENST00000422622 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
SSPN-202ENST00000422622 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
SSPN-202ENST00000422622 IL2RBP14784 551 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms