RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 PDE1AP54750 535 aa31.82■■■□□ 2.68
ITGA9-203ENST00000422441 RTN4Q9NQC3 1192 aaKnown RBP31.82■■■□□ 2.68
ITGA9-203ENST00000422441 ATP8B2P98198 1209 aa31.81■■■□□ 2.68
ITGA9-203ENST00000422441 EXOC6BQ9Y2D4 811 aa31.81■■■□□ 2.68
ITGA9-203ENST00000422441 NBPF6Q5VWK0 638 aa31.8■■■□□ 2.68
ITGA9-203ENST00000422441 NBPF4Q96M43 638 aa31.8■■■□□ 2.68
ITGA9-203ENST00000422441 FOXD4L1Q9NU39 408 aa31.8■■■□□ 2.68
ITGA9-203ENST00000422441 CEMIPQ8WUJ3 1361 aa31.8■■■□□ 2.68
ITGA9-203ENST00000422441 L1TD1Q5T7N2 865 aaKnown RBP31.8■■■□□ 2.68
ITGA9-203ENST00000422441 PNMA6EA0A0J9YXQ4 647 aa31.79■■■□□ 2.68
ITGA9-203ENST00000422441 TRHP20396 242 aaPredicted RBP31.79■■■□□ 2.68
ITGA9-203ENST00000422441 PSME1Q06323 249 aa31.79■■■□□ 2.68
ITGA9-203ENST00000422441 N4BP2Q86UW6 1770 aaPredicted RBP31.79■■■□□ 2.68
ITGA9-203ENST00000422441 ESCO1Q5FWF5 840 aa31.78■■■□□ 2.68
ITGA9-203ENST00000422441 SALL3Q9BXA9 1300 aa31.78■■■□□ 2.68
ITGA9-203ENST00000422441 PXDNLA1KZ92 1463 aa31.77■■■□□ 2.68
ITGA9-203ENST00000422441 ADGRL3Q9HAR2 1447 aa31.77■■■□□ 2.68
ITGA9-203ENST00000422441 HDGFL1Q5TGJ6 251 aa31.77■■■□□ 2.68
ITGA9-203ENST00000422441 GZF1Q9H116 711 aaPredicted RBP31.77■■■□□ 2.68
ITGA9-203ENST00000422441 LRRCC1Q9C099 1032 aa31.76■■■□□ 2.67
ITGA9-203ENST00000422441 ZNF142P52746 1687 aaPredicted RBP31.76■■■□□ 2.67
ITGA9-203ENST00000422441 SETD1BQ9UPS6 1966 aaKnown RBP31.76■■■□□ 2.67
ITGA9-203ENST00000422441 KCNH5Q8NCM2 988 aa31.75■■■□□ 2.67
ITGA9-203ENST00000422441 USP44Q9H0E7 712 aa31.75■■■□□ 2.67
ITGA9-203ENST00000422441 LRRFIP2Q9Y608 721 aaKnown RBP31.75■■■□□ 2.67
ITGA9-203ENST00000422441 FSD2A1L4K1 749 aa31.74■■■□□ 2.67
ITGA9-203ENST00000422441 GBP4Q96PP9 640 aa31.74■■■□□ 2.67
ITGA9-203ENST00000422441 LGR6Q9HBX8 967 aa31.74■■■□□ 2.67
ITGA9-203ENST00000422441 REC8O95072 547 aa31.74■■■□□ 2.67
ITGA9-203ENST00000422441 PHAXQ9H814 394 aaKnown RBP31.74■■■□□ 2.67
ITGA9-203ENST00000422441 IBTKQ9P2D0 1353 aaPredicted RBP31.74■■■□□ 2.67
ITGA9-203ENST00000422441 MED1Q15648 1581 aaPredicted RBP31.74■■■□□ 2.67
ITGA9-203ENST00000422441 ERC2O15083 957 aa31.73■■■□□ 2.67
ITGA9-203ENST00000422441 EIF4A1P60842 406 aaKnown RBP31.72■■■□□ 2.67
ITGA9-203ENST00000422441 GOLGA6L3A6NEY3 463 aa31.7■■■□□ 2.67
ITGA9-203ENST00000422441 PHRF1Q9P1Y6 1649 aaKnown RBP31.7■■■□□ 2.67
ITGA9-203ENST00000422441 ZBTB7CA1YPR0 619 aa31.7■■■□□ 2.66
ITGA9-203ENST00000422441 RGPD2P0DJD1 1756 aa31.69■■■□□ 2.66
ITGA9-203ENST00000422441 UBTFL1P0CB47 393 aaPredicted RBP31.69■■■□□ 2.66
ITGA9-203ENST00000422441 TSHZ3Q63HK5 1081 aa31.69■■■□□ 2.66
ITGA9-203ENST00000422441 TUBGCP6Q96RT7 1819 aa31.69■■■□□ 2.66
ITGA9-203ENST00000422441 MX1P20591 662 aa31.69■■■□□ 2.66
ITGA9-203ENST00000422441 LRRC59Q96AG4 307 aaKnown RBP31.68■■■□□ 2.66
ITGA9-203ENST00000422441 KDM3BQ7LBC6 1761 aa31.67■■■□□ 2.66
ITGA9-203ENST00000422441 HOXB7P09629 217 aa31.67■■■□□ 2.66
ITGA9-203ENST00000422441 EIF2S2P20042 333 aaKnown RBP31.67■■■□□ 2.66
ITGA9-203ENST00000422441 SSFA2P28290 1259 aa31.66■■■□□ 2.66
ITGA9-203ENST00000422441 AKAP4Q5JQC9 854 aa31.66■■■□□ 2.66
ITGA9-203ENST00000422441 STAP2Q9UGK3 403 aa31.66■■■□□ 2.66
ITGA9-203ENST00000422441 KCNQ3O43525 872 aa31.65■■■□□ 2.66
ITGA9-203ENST00000422441 XRCC6P12956 609 aaKnown RBP eCLIP31.65■■■□□ 2.66
ITGA9-203ENST00000422441 SSH3Q8TE77 659 aa31.65■■■□□ 2.66
ITGA9-203ENST00000422441 LMO7Q8WWI1 1683 aa31.65■■■□□ 2.66
ITGA9-203ENST00000422441 CLEC17AQ6ZS10 378 aa31.64■■■□□ 2.66
ITGA9-203ENST00000422441 ORAI2Q96SN7 254 aa31.64■■■□□ 2.66
ITGA9-203ENST00000422441 SRCIN1Q9C0H9 1055 aa31.64■■■□□ 2.66
ITGA9-203ENST00000422441 PLEKHO1Q53GL0 409 aaPredicted RBP31.64■■■□□ 2.66
ITGA9-203ENST00000422441 ZNF530Q6P9A1 599 aaPredicted RBP31.64■■■□□ 2.66
ITGA9-203ENST00000422441 GCP02774 474 aa31.63■■■□□ 2.65
ITGA9-203ENST00000422441 CHPF2Q9P2E5 772 aa31.63■■■□□ 2.65
ITGA9-203ENST00000422441 ST18O60284 1047 aa31.63■■■□□ 2.65
ITGA9-203ENST00000422441 ARHGEF25Q86VW2 580 aa31.63■■■□□ 2.65
ITGA9-203ENST00000422441 PTMSP20962 102 aa31.62■■■□□ 2.65
ITGA9-203ENST00000422441 TEFQ10587 303 aa31.61■■■□□ 2.65
ITGA9-203ENST00000422441 ESYT1Q9BSJ8 1104 aa31.61■■■□□ 2.65
ITGA9-203ENST00000422441 CHMP4AQ9BY43 222 aa31.61■■■□□ 2.65
ITGA9-203ENST00000422441 NPHP4O75161 1426 aaPredicted RBP31.61■■■□□ 2.65
ITGA9-203ENST00000422441 BTBD11A6QL63 1104 aa31.6■■■□□ 2.65
ITGA9-203ENST00000422441 SKOR2Q2VWA4 1001 aaPredicted RBP31.6■■■□□ 2.65
ITGA9-203ENST00000422441 MPRIPQ6WCQ1 1025 aa31.6■■■□□ 2.65
ITGA9-203ENST00000422441 ARXQ96QS3 562 aa31.6■■■□□ 2.65
ITGA9-203ENST00000422441 XPCQ01831 940 aaPredicted RBP31.6■■■□□ 2.65
ITGA9-203ENST00000422441 POLA2Q14181 598 aa31.6■■■□□ 2.65
ITGA9-203ENST00000422441 PPP1R42Q7Z4L9 355 aa31.6■■■□□ 2.65
ITGA9-203ENST00000422441 AMOTQ4VCS5 1084 aa31.59■■■□□ 2.65
ITGA9-203ENST00000422441 NCAPD2Q15021 1401 aa31.59■■■□□ 2.65
ITGA9-203ENST00000422441 SLIT3O75094 1523 aa31.59■■■□□ 2.65
ITGA9-203ENST00000422441 CHMLP26374 656 aa31.58■■■□□ 2.65
ITGA9-203ENST00000422441 BEND3Q5T5X7 828 aa31.58■■■□□ 2.65
ITGA9-203ENST00000422441 DNAAF4Q8WXU2 420 aa31.58■■■□□ 2.65
ITGA9-203ENST00000422441 ADAMTSL3P82987 1691 aa31.57■■■□□ 2.64
ITGA9-203ENST00000422441 AOX1Q06278 1338 aa31.57■■■□□ 2.64
ITGA9-203ENST00000422441 PI4KAP2A4QPH2 592 aa31.57■■■□□ 2.64
ITGA9-203ENST00000422441 RAB11FIP3O75154 756 aa31.57■■■□□ 2.64
ITGA9-203ENST00000422441 PI4KAP1Q8N8J0 262 aa31.57■■■□□ 2.64
ITGA9-203ENST00000422441 RILPL2Q969X0 211 aa31.57■■■□□ 2.64
ITGA9-203ENST00000422441 TRIM6-TRIM34B2RNG4 842 aa31.56■■■□□ 2.64
ITGA9-203ENST00000422441 RNMTO43148 476 aaKnown RBP31.56■■■□□ 2.64
ITGA9-203ENST00000422441 AK9Q5TCS8 1911 aa31.56■■■□□ 2.64
ITGA9-203ENST00000422441 NBPF7P0C2Y1 421 aaPredicted RBP31.56■■■□□ 2.64
ITGA9-203ENST00000422441 NUCB2P80303 420 aa31.56■■■□□ 2.64
ITGA9-203ENST00000422441 IL1RAPL2Q9NP60 686 aa31.56■■■□□ 2.64
ITGA9-203ENST00000422441 BAG4O95429 457 aaKnown RBP31.55■■■□□ 2.64
ITGA9-203ENST00000422441 PXDNQ92626 1479 aa31.55■■■□□ 2.64
ITGA9-203ENST00000422441 CYP2E1P05181 493 aaPredicted RBP31.55■■■□□ 2.64
ITGA9-203ENST00000422441 CWC22Q9HCG8 908 aaKnown RBP31.55■■■□□ 2.64
ITGA9-203ENST00000422441 SURF6O75683 361 aaKnown RBP31.54■■■□□ 2.64
ITGA9-203ENST00000422441 UNC5CLQ8IV45 518 aa31.54■■■□□ 2.64
ITGA9-203ENST00000422441 ANKRD24Q8TF21 1146 aa31.54■■■□□ 2.64
ITGA9-203ENST00000422441 PLEKHG5O94827 1062 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms