RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
COL20A1-203ENST00000422202 LRSAM1Q6UWE0 723 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 JAKMIP1Q96N16 626 aaKnown RBP15.79■□□□□ 0.12
COL20A1-203ENST00000422202 SULT6B1Q6IMI4 303 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 ZNF444Q8N0Y2 327 aaPredicted RBP15.79■□□□□ 0.12
COL20A1-203ENST00000422202 CEP126Q9P2H0 1117 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 DDX11Q96FC9 970 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 USP8P40818 1118 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 BCAR3O75815 825 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 LUZP1Q86V48 1076 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 WDR33Q9C0J8 1336 aaKnown RBP15.78■□□□□ 0.12
COL20A1-203ENST00000422202 SLC4A8Q2Y0W8 1093 aa15.78■□□□□ 0.12
COL20A1-203ENST00000422202 ZMYND15Q9H091 742 aa15.77■□□□□ 0.12
COL20A1-203ENST00000422202 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.12
COL20A1-203ENST00000422202 SPTY2D1Q68D10 685 aaPredicted RBP15.77■□□□□ 0.11
COL20A1-203ENST00000422202 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
COL20A1-203ENST00000422202 SYCP3Q8IZU3 236 aa15.77■□□□□ 0.11
COL20A1-203ENST00000422202 NGLY1Q96IV0 654 aa15.77■□□□□ 0.11
COL20A1-203ENST00000422202 FERMT1Q9BQL6 677 aa15.77■□□□□ 0.11
COL20A1-203ENST00000422202 TMX1Q9H3N1 280 aa15.77■□□□□ 0.11
COL20A1-203ENST00000422202 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
COL20A1-203ENST00000422202 CAMK4Q16566 473 aa15.76■□□□□ 0.11
COL20A1-203ENST00000422202 FILIP1Q7Z7B0 1213 aa15.76■□□□□ 0.11
COL20A1-203ENST00000422202 ECM2O94769 699 aaPredicted RBP15.76■□□□□ 0.11
COL20A1-203ENST00000422202 FGFR1OPO95684 399 aaKnown RBP15.76■□□□□ 0.11
COL20A1-203ENST00000422202 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
COL20A1-203ENST00000422202 CASTP20810 708 aaKnown RBP15.76■□□□□ 0.11
COL20A1-203ENST00000422202 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
COL20A1-203ENST00000422202 SRGAP3O43295 1099 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 CBX1P83916 185 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 TMEM266Q2M3C6 531 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 SPATA24Q86W54 205 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
COL20A1-203ENST00000422202 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
COL20A1-203ENST00000422202 OTUD6BQ8N6M0 293 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 BICD1Q96G01 975 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
COL20A1-203ENST00000422202 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 SHTN1A0MZ66 631 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 NUP62CLQ9H1M0 184 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
COL20A1-203ENST00000422202 RAB3IL1Q8TBN0 382 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 TAOK3Q9H2K8 898 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 SYNCQ9H7C4 482 aa15.74■□□□□ 0.11
COL20A1-203ENST00000422202 HMGB2P26583 209 aaKnown RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
COL20A1-203ENST00000422202 APBB1IPQ7Z5R6 666 aaPredicted RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 PPP1R14CQ8TAE6 165 aa15.73■□□□□ 0.11
COL20A1-203ENST00000422202 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 MAP9Q49MG5 647 aa15.73■□□□□ 0.11
COL20A1-203ENST00000422202 UQCRHLA0A096LP55 91 aa15.73■□□□□ 0.11
COL20A1-203ENST00000422202 UQCRHP07919 91 aa15.73■□□□□ 0.11
COL20A1-203ENST00000422202 MPHOSPH6Q99547 160 aaKnown RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 PTCD1O75127 700 aaKnown RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
COL20A1-203ENST00000422202 NAPBQ9H115 298 aa15.73■□□□□ 0.11
COL20A1-203ENST00000422202 TDRD12Q587J7 1177 aaKnown RBP15.72■□□□□ 0.11
COL20A1-203ENST00000422202 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 TSR2Q969E8 191 aaKnown RBP15.72■□□□□ 0.11
COL20A1-203ENST00000422202 CFAP57Q96MR6 1250 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 RNF187Q5TA31 235 aaPredicted RBP15.72■□□□□ 0.11
COL20A1-203ENST00000422202 CKAP2LQ8IYA6 745 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
COL20A1-203ENST00000422202 KIF5CO60282 957 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
COL20A1-203ENST00000422202 PRC1O43663 620 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 SPECC1Q5M775 1068 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 TMOD3Q9NYL9 352 aa15.72■□□□□ 0.11
COL20A1-203ENST00000422202 CETN1Q12798 172 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 TIGD1Q96MW7 591 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 RFX1P22670 979 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 AAMPQ13685 434 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 LRRC45Q96CN5 670 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 SH3BP5O60239 455 aa15.71■□□□□ 0.11
COL20A1-203ENST00000422202 FSD2A1L4K1 749 aa15.71■□□□□ 0.1
COL20A1-203ENST00000422202 NLRP5P59047 1200 aa15.71■□□□□ 0.1
COL20A1-203ENST00000422202 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
COL20A1-203ENST00000422202 NOP2P46087 812 aaKnown RBP15.7■□□□□ 0.1
COL20A1-203ENST00000422202 KRT32Q14532 448 aa15.7■□□□□ 0.1
COL20A1-203ENST00000422202 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
COL20A1-203ENST00000422202 IKBKGQ9Y6K9 419 aa15.7■□□□□ 0.1
COL20A1-203ENST00000422202 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
COL20A1-203ENST00000422202 TCERG1LQ5VWI1 586 aa15.7■□□□□ 0.1
COL20A1-203ENST00000422202 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
COL20A1-203ENST00000422202 HLTFQ14527 1009 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL20A1-203ENST00000422202 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
COL20A1-203ENST00000422202 GUCY1B3Q02153 619 aa15.7■□□□□ 0.1
COL20A1-203ENST00000422202 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
COL20A1-203ENST00000422202 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 FYCO1Q9BQS8 1478 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 A0A087WZG4 1122 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms