RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 LY75O60449 1722 aa13.36□□□□□ -0.27
NF1-203ENST00000422121 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
NF1-203ENST00000422121 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
NF1-203ENST00000422121 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
NF1-203ENST00000422121 ASAP1Q9ULH1 1129 aa13.35□□□□□ -0.27
NF1-203ENST00000422121 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
NF1-203ENST00000422121 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
NF1-203ENST00000422121 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
NF1-203ENST00000422121 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
NF1-203ENST00000422121 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
NF1-203ENST00000422121 SLC4A9Q96Q91 983 aa13.33□□□□□ -0.28
NF1-203ENST00000422121 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
NF1-203ENST00000422121 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
NF1-203ENST00000422121 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
NF1-203ENST00000422121 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
NF1-203ENST00000422121 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
NF1-203ENST00000422121 CASZ1Q86V15 1759 aa13.32□□□□□ -0.28
NF1-203ENST00000422121 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
NF1-203ENST00000422121 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
NF1-203ENST00000422121 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
NF1-203ENST00000422121 AMIGO3Q86WK7 504 aa13.31□□□□□ -0.28
NF1-203ENST00000422121 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
NF1-203ENST00000422121 LRP5O75197 1615 aa13.31□□□□□ -0.28
NF1-203ENST00000422121 ITPK1Q13572 414 aa13.3□□□□□ -0.28
NF1-203ENST00000422121 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
NF1-203ENST00000422121 PNPLA7Q6ZV29 1317 aa13.3□□□□□ -0.28
NF1-203ENST00000422121 LOC102724428A0A0B4J2F2 783 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 PTGER2P43116 358 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
NF1-203ENST00000422121 SIK1P57059 783 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 RALBP1Q15311 655 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
NF1-203ENST00000422121 UTRNP46939 3433 aa13.29□□□□□ -0.28
NF1-203ENST00000422121 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
NF1-203ENST00000422121 RNMTO43148 476 aaKnown RBP13.28□□□□□ -0.28
NF1-203ENST00000422121 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
NF1-203ENST00000422121 CABP4P57796 275 aa13.28□□□□□ -0.28
NF1-203ENST00000422121 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
NF1-203ENST00000422121 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
NF1-203ENST00000422121 LINC00116Q8NCU8 138 aa13.28□□□□□ -0.28
NF1-203ENST00000422121 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
NF1-203ENST00000422121 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.28
NF1-203ENST00000422121 FCHSD2O94868 740 aa13.27□□□□□ -0.29
NF1-203ENST00000422121 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
NF1-203ENST00000422121 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.29
NF1-203ENST00000422121 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.29
NF1-203ENST00000422121 COL23A1Q86Y22 540 aaPredicted RBP13.26□□□□□ -0.29
NF1-203ENST00000422121 PLEKHF1Q96S99 279 aa13.26□□□□□ -0.29
NF1-203ENST00000422121 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
NF1-203ENST00000422121 SLC52A2Q9HAB3 445 aa13.26□□□□□ -0.29
NF1-203ENST00000422121 SPON1Q9HCB6 807 aa13.26□□□□□ -0.29
NF1-203ENST00000422121 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
NF1-203ENST00000422121 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
NF1-203ENST00000422121 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
NF1-203ENST00000422121 C5P01031 1676 aa13.25□□□□□ -0.29
NF1-203ENST00000422121 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
NF1-203ENST00000422121 MRC1P22897 1456 aa13.24□□□□□ -0.29
NF1-203ENST00000422121 MYBBP1AQ9BQG0 1328 aaKnown RBP13.24□□□□□ -0.29
NF1-203ENST00000422121 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
NF1-203ENST00000422121 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
NF1-203ENST00000422121 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
NF1-203ENST00000422121 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
NF1-203ENST00000422121 MTFR1LQ9H019 292 aa13.24□□□□□ -0.29
NF1-203ENST00000422121 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
NF1-203ENST00000422121 CEMIPQ8WUJ3 1361 aa13.23□□□□□ -0.29
NF1-203ENST00000422121 MAP3K5Q99683 1374 aa13.23□□□□□ -0.29
NF1-203ENST00000422121 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
NF1-203ENST00000422121 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
NF1-203ENST00000422121 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
NF1-203ENST00000422121 VIRMAQ69YN4 1812 aaKnown RBP13.22□□□□□ -0.29
NF1-203ENST00000422121 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
NF1-203ENST00000422121 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.3
NF1-203ENST00000422121 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
NF1-203ENST00000422121 KCPQ6ZWJ8 1503 aa13.2□□□□□ -0.3
NF1-203ENST00000422121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
NF1-203ENST00000422121 KCNQ3O43525 872 aa13.2□□□□□ -0.3
NF1-203ENST00000422121 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
NF1-203ENST00000422121 MCM10Q7L590 875 aa13.2□□□□□ -0.3
NF1-203ENST00000422121 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
NF1-203ENST00000422121 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
NF1-203ENST00000422121 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
NF1-203ENST00000422121 INTS5Q6P9B9 1019 aaKnown RBP13.19□□□□□ -0.3
NF1-203ENST00000422121 MYH14Q7Z406 1995 aaKnown RBP13.19□□□□□ -0.3
NF1-203ENST00000422121 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
NF1-203ENST00000422121 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
NF1-203ENST00000422121 GNPATO15228 680 aa13.18□□□□□ -0.3
NF1-203ENST00000422121 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
NF1-203ENST00000422121 AK7Q96M32 723 aa13.18□□□□□ -0.3
NF1-203ENST00000422121 TJP1Q07157 1748 aa13.18□□□□□ -0.3
NF1-203ENST00000422121 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
NF1-203ENST00000422121 PHF14O94880 888 aa13.17□□□□□ -0.3
NF1-203ENST00000422121 SSFA2P28290 1259 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms