RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 MYBBP1AQ9BQG0 1328 aaKnown RBP28.55■■■□□ 2.16
FNDC3B-204ENST00000421757 ATP6V1AP38606 617 aa28.55■■■□□ 2.16
FNDC3B-204ENST00000421757 CASZ1Q86V15 1759 aa28.55■■■□□ 2.16
FNDC3B-204ENST00000421757 SLC52A2Q9HAB3 445 aa28.54■■■□□ 2.16
FNDC3B-204ENST00000421757 MAP3K5Q99683 1374 aa28.53■■■□□ 2.16
FNDC3B-204ENST00000421757 GNAT3A8MTJ3 354 aa28.53■■■□□ 2.16
FNDC3B-204ENST00000421757 ATF5Q9Y2D1 282 aaPredicted RBP28.53■■■□□ 2.16
FNDC3B-204ENST00000421757 C5P01031 1676 aa28.53■■■□□ 2.16
FNDC3B-204ENST00000421757 SCN11AQ9UI33 1791 aa28.52■■■□□ 2.16
FNDC3B-204ENST00000421757 PNPLA7Q6ZV29 1317 aa28.51■■■□□ 2.15
FNDC3B-204ENST00000421757 NEFMP07197 916 aa28.51■■■□□ 2.15
FNDC3B-204ENST00000421757 AK7Q96M32 723 aa28.51■■■□□ 2.15
FNDC3B-204ENST00000421757 PPP1R1BQ9UD71 204 aaPredicted RBP28.51■■■□□ 2.15
FNDC3B-204ENST00000421757 MSH5O43196 834 aa28.5■■■□□ 2.15
FNDC3B-204ENST00000421757 PTCD1O75127 700 aaKnown RBP28.5■■■□□ 2.15
FNDC3B-204ENST00000421757 MTFR1LQ9H019 292 aa28.5■■■□□ 2.15
FNDC3B-204ENST00000421757 ITPK1Q13572 414 aa28.49■■■□□ 2.15
FNDC3B-204ENST00000421757 LINC00116Q8NCU8 138 aa28.49■■■□□ 2.15
FNDC3B-204ENST00000421757 PRKRIP1Q9H875 184 aaPredicted RBP28.49■■■□□ 2.15
FNDC3B-204ENST00000421757 TAF1LQ8IZX4 1826 aa28.47■■■□□ 2.15
FNDC3B-204ENST00000421757 TEFQ10587 303 aa28.46■■■□□ 2.15
FNDC3B-204ENST00000421757 IL17REQ8NFR9 667 aa28.46■■■□□ 2.15
FNDC3B-204ENST00000421757 C4BP0C0L5 1744 aa28.46■■■□□ 2.15
FNDC3B-204ENST00000421757 SLC16A10Q8TF71 515 aa28.45■■■□□ 2.14
FNDC3B-204ENST00000421757 SLC4A9Q96Q91 983 aa28.45■■■□□ 2.14
FNDC3B-204ENST00000421757 PNNQ9H307 717 aaKnown RBP28.45■■■□□ 2.14
FNDC3B-204ENST00000421757 MRC1P22897 1456 aa28.45■■■□□ 2.14
FNDC3B-204ENST00000421757 QSER1Q2KHR3 1735 aa28.44■■■□□ 2.14
FNDC3B-204ENST00000421757 SLC39A6Q13433 755 aa28.44■■■□□ 2.14
FNDC3B-204ENST00000421757 COL23A1Q86Y22 540 aaPredicted RBP28.44■■■□□ 2.14
FNDC3B-204ENST00000421757 RTF1Q92541 710 aaKnown RBP28.44■■■□□ 2.14
FNDC3B-204ENST00000421757 TUBGCP6Q96RT7 1819 aa28.43■■■□□ 2.14
FNDC3B-204ENST00000421757 PHF14O94880 888 aa28.43■■■□□ 2.14
FNDC3B-204ENST00000421757 FLAD1Q8NFF5 587 aa28.43■■■□□ 2.14
FNDC3B-204ENST00000421757 ADAMTS7Q9UKP4 1686 aa28.42■■■□□ 2.14
FNDC3B-204ENST00000421757 VIRMAQ69YN4 1812 aaKnown RBP28.42■■■□□ 2.14
FNDC3B-204ENST00000421757 GNPATO15228 680 aa28.41■■■□□ 2.14
FNDC3B-204ENST00000421757 PTGER2P43116 358 aa28.41■■■□□ 2.14
FNDC3B-204ENST00000421757 MAPK8IP3Q9UPT6 1336 aa28.41■■■□□ 2.14
FNDC3B-204ENST00000421757 TTC5Q8N0Z6 440 aa28.39■■■□□ 2.14
FNDC3B-204ENST00000421757 PLEKHF1Q96S99 279 aa28.39■■■□□ 2.14
FNDC3B-204ENST00000421757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.38■■■□□ 2.13
FNDC3B-204ENST00000421757 WDR43Q15061 677 aaKnown RBP eCLIP28.38■■■□□ 2.138e-7■□□□□ 8.3
FNDC3B-204ENST00000421757 SMIM5Q71RC9 77 aa28.38■■■□□ 2.13
FNDC3B-204ENST00000421757 MCM10Q7L590 875 aa28.38■■■□□ 2.13
FNDC3B-204ENST00000421757 SSFA2P28290 1259 aa28.37■■■□□ 2.13
FNDC3B-204ENST00000421757 AMIGO3Q86WK7 504 aa28.37■■■□□ 2.13
FNDC3B-204ENST00000421757 CEMIPQ8WUJ3 1361 aa28.37■■■□□ 2.13
FNDC3B-204ENST00000421757 ZNF831Q5JPB2 1677 aa28.36■■■□□ 2.13
FNDC3B-204ENST00000421757 POLD1P28340 1107 aa28.36■■■□□ 2.13
FNDC3B-204ENST00000421757 HTATSF1O43719 755 aaKnown RBP28.35■■■□□ 2.13
FNDC3B-204ENST00000421757 DCTN1Q14203 1278 aa28.35■■■□□ 2.13
FNDC3B-204ENST00000421757 SGIP1Q9BQI5 828 aa28.35■■■□□ 2.13
FNDC3B-204ENST00000421757 RTCBQ9Y3I0 505 aaKnown RBP28.35■■■□□ 2.13
FNDC3B-204ENST00000421757 RC3H1Q5TC82 1133 aaKnown RBP28.34■■■□□ 2.13
FNDC3B-204ENST00000421757 CNTNAP4Q9C0A0 1308 aa28.34■■■□□ 2.13
FNDC3B-204ENST00000421757 BTBD11A6QL63 1104 aa28.33■■■□□ 2.13
FNDC3B-204ENST00000421757 NFE2L2Q16236 605 aa28.33■■■□□ 2.13
FNDC3B-204ENST00000421757 MSL1Q68DK7 614 aa28.33■■■□□ 2.13
FNDC3B-204ENST00000421757 ZNF790Q6PG37 636 aa28.33■■■□□ 2.13
FNDC3B-204ENST00000421757 ARXQ96QS3 562 aa28.33■■■□□ 2.13
FNDC3B-204ENST00000421757 UBR3Q6ZT12 1888 aa28.32■■■□□ 2.12
FNDC3B-204ENST00000421757 DNAJC10Q8IXB1 793 aa28.32■■■□□ 2.12
FNDC3B-204ENST00000421757 CRKLP46109 303 aaKnown RBP28.31■■■□□ 2.12
FNDC3B-204ENST00000421757 KCPQ6ZWJ8 1503 aa28.31■■■□□ 2.12
FNDC3B-204ENST00000421757 COL5A3P25940 1745 aaPredicted RBP28.3■■■□□ 2.12
FNDC3B-204ENST00000421757 TRAPPC3LQ5T215 181 aa28.3■■■□□ 2.12
FNDC3B-204ENST00000421757 ANP32CO43423 234 aa28.29■■■□□ 2.12
FNDC3B-204ENST00000421757 RPS6KA4O75676 772 aa28.29■■■□□ 2.12
FNDC3B-204ENST00000421757 CCDC146Q8IYE0 955 aa28.29■■■□□ 2.12
FNDC3B-204ENST00000421757 VSIG10Q8N0Z9 540 aa28.29■■■□□ 2.12
FNDC3B-204ENST00000421757 ZNF496Q96IT1 587 aaPredicted RBP28.28■■■□□ 2.12
FNDC3B-204ENST00000421757 TJP1Q07157 1748 aa28.28■■■□□ 2.12
FNDC3B-204ENST00000421757 SIPA1L3O60292 1781 aaPredicted RBP28.27■■■□□ 2.12
FNDC3B-204ENST00000421757 ADAMTS8Q9UP79 889 aa28.27■■■□□ 2.12
FNDC3B-204ENST00000421757 ADRA2BP18089 450 aa28.26■■■□□ 2.11
FNDC3B-204ENST00000421757 KLHL34Q8N239 644 aa28.26■■■□□ 2.11
FNDC3B-204ENST00000421757 FMNL2Q96PY5 1086 aa28.26■■■□□ 2.11
FNDC3B-204ENST00000421757 FHDC1Q9C0D6 1143 aaPredicted RBP28.26■■■□□ 2.11
FNDC3B-204ENST00000421757 KCNQ3O43525 872 aa28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 CYP19A1P11511 503 aaPredicted RBP28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 RFC4P35249 363 aa28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 RIPK4P57078 832 aa28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 TAF7Q15545 349 aaPredicted RBP28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 ARHGEF1Q92888 912 aaKnown RBP28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 CCDC87Q9NVE4 849 aa28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 CICQ96RK0 1608 aaPredicted RBP28.25■■■□□ 2.11
FNDC3B-204ENST00000421757 INTS5Q6P9B9 1019 aaKnown RBP28.24■■■□□ 2.11
FNDC3B-204ENST00000421757 RUNDC1Q96C34 613 aa28.24■■■□□ 2.11
FNDC3B-204ENST00000421757 UBR2Q8IWV8 1755 aa28.24■■■□□ 2.11
FNDC3B-204ENST00000421757 HEG1Q9ULI3 1381 aa28.24■■■□□ 2.11
FNDC3B-204ENST00000421757 STARD3NLO95772 234 aa28.23■■■□□ 2.11
FNDC3B-204ENST00000421757 DLG5Q8TDM6 1919 aa28.23■■■□□ 2.11
FNDC3B-204ENST00000421757 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
FNDC3B-204ENST00000421757 THUMPD2Q9BTF0 503 aaKnown RBP28.22■■■□□ 2.11
FNDC3B-204ENST00000421757 TEX13AQ9BXU3 409 aaPredicted RBP28.22■■■□□ 2.11
FNDC3B-204ENST00000421757 MYH14Q7Z406 1995 aaKnown RBP28.22■■■□□ 2.11
FNDC3B-204ENST00000421757 NEUROD2Q15784 382 aa28.21■■■□□ 2.11
FNDC3B-204ENST00000421757 SYT17Q9BSW7 474 aa28.21■■■□□ 2.11
FNDC3B-204ENST00000421757 RRP7AQ9Y3A4 280 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms