RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CABP4P57796 275 aa20.56■□□□□ 0.88
DDX55-203ENST00000421670 FAM196AQ6ZSG2 479 aa20.56■□□□□ 0.88
DDX55-203ENST00000421670 UBR2Q8IWV8 1755 aa20.56■□□□□ 0.88
DDX55-203ENST00000421670 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
DDX55-203ENST00000421670 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
DDX55-203ENST00000421670 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
DDX55-203ENST00000421670 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
DDX55-203ENST00000421670 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
DDX55-203ENST00000421670 PIGBQ92521 554 aa20.52■□□□□ 0.88
DDX55-203ENST00000421670 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.88
DDX55-203ENST00000421670 CALD1Q05682 793 aaKnown RBP20.51■□□□□ 0.87
DDX55-203ENST00000421670 WDR63Q8IWG1 891 aa20.51■□□□□ 0.87
DDX55-203ENST00000421670 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
DDX55-203ENST00000421670 TRIM37O94972 964 aa20.51■□□□□ 0.87
DDX55-203ENST00000421670 TAF7Q15545 349 aaPredicted RBP20.51■□□□□ 0.87
DDX55-203ENST00000421670 LY75O60449 1722 aa20.5■□□□□ 0.87
DDX55-203ENST00000421670 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
DDX55-203ENST00000421670 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
DDX55-203ENST00000421670 IL16Q14005 1332 aa20.49■□□□□ 0.87
DDX55-203ENST00000421670 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
DDX55-203ENST00000421670 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
DDX55-203ENST00000421670 IFT57Q9NWB7 429 aa20.49■□□□□ 0.87
DDX55-203ENST00000421670 C5P01031 1676 aa20.49■□□□□ 0.87
DDX55-203ENST00000421670 KCPQ6ZWJ8 1503 aa20.49■□□□□ 0.87
DDX55-203ENST00000421670 ZNF853P0CG23 659 aa20.48■□□□□ 0.87
DDX55-203ENST00000421670 TSR2Q969E8 191 aaKnown RBP20.48■□□□□ 0.87
DDX55-203ENST00000421670 CFAP44Q96MT7 982 aa20.48■□□□□ 0.87
DDX55-203ENST00000421670 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
DDX55-203ENST00000421670 GNAI1P63096 354 aa20.47■□□□□ 0.87
DDX55-203ENST00000421670 BCL11BQ9C0K0 894 aaPredicted RBP20.47■□□□□ 0.87
DDX55-203ENST00000421670 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
DDX55-203ENST00000421670 ASAP1Q9ULH1 1129 aa20.47■□□□□ 0.87
DDX55-203ENST00000421670 KCNQ3O43525 872 aa20.46■□□□□ 0.87
DDX55-203ENST00000421670 CHL1O00533 1208 aa20.46■□□□□ 0.87
DDX55-203ENST00000421670 ILDR2Q71H61 639 aa20.46■□□□□ 0.87
DDX55-203ENST00000421670 FANCIQ9NVI1 1328 aa20.46■□□□□ 0.87
DDX55-203ENST00000421670 TJP1Q07157 1748 aa20.45■□□□□ 0.86
DDX55-203ENST00000421670 RGPD3A6NKT7 1758 aaPredicted RBP20.45■□□□□ 0.86
DDX55-203ENST00000421670 RGPD4Q7Z3J3 1758 aa20.45■□□□□ 0.86
DDX55-203ENST00000421670 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
DDX55-203ENST00000421670 ATG3Q9NT62 314 aa20.45■□□□□ 0.86
DDX55-203ENST00000421670 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
DDX55-203ENST00000421670 E9PSI1 815 aa20.44■□□□□ 0.86
DDX55-203ENST00000421670 SLFN5Q08AF3 891 aa20.44■□□□□ 0.86
DDX55-203ENST00000421670 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
DDX55-203ENST00000421670 TTC5Q8N0Z6 440 aa20.43■□□□□ 0.86
DDX55-203ENST00000421670 MYH16Q9H6N6 1097 aa20.42■□□□□ 0.86
DDX55-203ENST00000421670 BABAM1Q9NWV8 329 aa20.42■□□□□ 0.86
DDX55-203ENST00000421670 TAF1LQ8IZX4 1826 aa20.42■□□□□ 0.86
DDX55-203ENST00000421670 ZNF831Q5JPB2 1677 aa20.42■□□□□ 0.86
DDX55-203ENST00000421670 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
DDX55-203ENST00000421670 COL5A3P25940 1745 aaPredicted RBP20.42■□□□□ 0.86
DDX55-203ENST00000421670 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
DDX55-203ENST00000421670 KRT24Q2M2I5 525 aa20.41■□□□□ 0.86
DDX55-203ENST00000421670 ZNF496Q96IT1 587 aaPredicted RBP20.41■□□□□ 0.86
DDX55-203ENST00000421670 EIF4A1P60842 406 aaKnown RBP20.39■□□□□ 0.85
DDX55-203ENST00000421670 DUSP27Q5VZP5 1158 aa20.39■□□□□ 0.85
DDX55-203ENST00000421670 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
DDX55-203ENST00000421670 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
DDX55-203ENST00000421670 APBA3O96018 575 aa20.38■□□□□ 0.85
DDX55-203ENST00000421670 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
DDX55-203ENST00000421670 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
DDX55-203ENST00000421670 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
DDX55-203ENST00000421670 RREB1Q92766 1687 aa20.37■□□□□ 0.85
DDX55-203ENST00000421670 EXOSC9Q06265 439 aaKnown RBP20.37■□□□□ 0.85
DDX55-203ENST00000421670 SLC4A9Q96Q91 983 aa20.37■□□□□ 0.85
DDX55-203ENST00000421670 PRAMEF22A3QJZ6 481 aa20.36■□□□□ 0.85
DDX55-203ENST00000421670 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
DDX55-203ENST00000421670 ELL2O00472 640 aaPredicted RBP20.35■□□□□ 0.85
DDX55-203ENST00000421670 SIK1P57059 783 aa20.35■□□□□ 0.85
DDX55-203ENST00000421670 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
DDX55-203ENST00000421670 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
DDX55-203ENST00000421670 KCNQ4P56696 695 aa20.34■□□□□ 0.85
DDX55-203ENST00000421670 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
DDX55-203ENST00000421670 TSPYL6Q8N831 410 aa20.34■□□□□ 0.85
DDX55-203ENST00000421670 MYH14Q7Z406 1995 aaKnown RBP20.33■□□□□ 0.84
DDX55-203ENST00000421670 PLSCR1O15162 318 aa20.33■□□□□ 0.84
DDX55-203ENST00000421670 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.84
DDX55-203ENST00000421670 C4BP0C0L5 1744 aa20.32■□□□□ 0.84
DDX55-203ENST00000421670 ATP6V1AP38606 617 aa20.32■□□□□ 0.84
DDX55-203ENST00000421670 UPF1Q92900 1129 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX55-203ENST00000421670 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
DDX55-203ENST00000421670 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
DDX55-203ENST00000421670 EN1Q05925 392 aaPredicted RBP20.31■□□□□ 0.84
DDX55-203ENST00000421670 ITPK1Q13572 414 aa20.31■□□□□ 0.84
DDX55-203ENST00000421670 TWISTNBQ3B726 338 aaPredicted RBP20.31■□□□□ 0.84
DDX55-203ENST00000421670 DEFB132Q7Z7B7 95 aa20.31■□□□□ 0.84
DDX55-203ENST00000421670 DNAJC10Q8IXB1 793 aa20.31■□□□□ 0.84
DDX55-203ENST00000421670 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
DDX55-203ENST00000421670 BAG6P46379 1132 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 PROM2Q8N271 834 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 TUBGCP6Q96RT7 1819 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 EZH2Q15910 746 aaKnown RBP20.29■□□□□ 0.84
DDX55-203ENST00000421670 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
DDX55-203ENST00000421670 CACNA1FO60840 1977 aa20.28■□□□□ 0.84
DDX55-203ENST00000421670 CAMKK2Q96RR4 588 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms