RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 EYA1Q99502 592 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 STRCQ7RTU9 1775 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
LINC00899-201ENST00000421538 DCTN1Q14203 1278 aa17.16■□□□□ 0.34
LINC00899-201ENST00000421538 VAMP4O75379 141 aa17.15■□□□□ 0.34
LINC00899-201ENST00000421538 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
LINC00899-201ENST00000421538 MRPL50Q8N5N7 158 aaKnown RBP17.15■□□□□ 0.34
LINC00899-201ENST00000421538 ARHGEF10O15013 1369 aa17.14■□□□□ 0.34
LINC00899-201ENST00000421538 MST1RQ04912 1400 aa17.14■□□□□ 0.33
LINC00899-201ENST00000421538 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
LINC00899-201ENST00000421538 CAVIN1Q6NZI2 390 aaKnown RBP17.14■□□□□ 0.33
LINC00899-201ENST00000421538 NFAT5O94916 1531 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 ATF3P18847 181 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 BRPF1P55201 1214 aaPredicted RBP17.13■□□□□ 0.33
LINC00899-201ENST00000421538 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 MCTP1Q6DN14 999 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
LINC00899-201ENST00000421538 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
LINC00899-201ENST00000421538 LTN1O94822 1766 aa17.13■□□□□ 0.33
LINC00899-201ENST00000421538 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
LINC00899-201ENST00000421538 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
LINC00899-201ENST00000421538 KDRP35968 1356 aa17.12■□□□□ 0.33
LINC00899-201ENST00000421538 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
LINC00899-201ENST00000421538 DYNC1I1O14576 645 aa17.12■□□□□ 0.33
LINC00899-201ENST00000421538 TRPM3Q9HCF6 1732 aaPredicted RBP17.12■□□□□ 0.33
LINC00899-201ENST00000421538 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
LINC00899-201ENST00000421538 SMAP1Q8IYB5 467 aaPredicted RBP17.11■□□□□ 0.33
LINC00899-201ENST00000421538 PDLIM2Q96JY6 352 aa17.11■□□□□ 0.33
LINC00899-201ENST00000421538 RBSNQ9H1K0 784 aa17.11■□□□□ 0.33
LINC00899-201ENST00000421538 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
LINC00899-201ENST00000421538 NUCB2P80303 420 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 ZKSCAN5Q9Y2L8 839 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 MCM5P33992 734 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
LINC00899-201ENST00000421538 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
LINC00899-201ENST00000421538 MCM10Q7L590 875 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 IP6K1Q92551 441 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
LINC00899-201ENST00000421538 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
LINC00899-201ENST00000421538 DCCP43146 1447 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 GCP02774 474 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 GNAI1P63096 354 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
LINC00899-201ENST00000421538 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.33
LINC00899-201ENST00000421538 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.33
LINC00899-201ENST00000421538 ARID3AQ99856 593 aa17.08■□□□□ 0.33
LINC00899-201ENST00000421538 ARHGAP45Q92619 1136 aa17.08■□□□□ 0.32
LINC00899-201ENST00000421538 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
LINC00899-201ENST00000421538 ABCC4O15439 1325 aa17.08■□□□□ 0.32
LINC00899-201ENST00000421538 ZNF335Q9H4Z2 1342 aaPredicted RBP17.08■□□□□ 0.32
LINC00899-201ENST00000421538 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
LINC00899-201ENST00000421538 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
LINC00899-201ENST00000421538 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
LINC00899-201ENST00000421538 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
LINC00899-201ENST00000421538 PRIM1P49642 420 aaKnown RBP17.07■□□□□ 0.32
LINC00899-201ENST00000421538 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
LINC00899-201ENST00000421538 SASS6Q6UVJ0 657 aa17.07■□□□□ 0.32
LINC00899-201ENST00000421538 SLIT3O75094 1523 aa17.06■□□□□ 0.32
LINC00899-201ENST00000421538 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
LINC00899-201ENST00000421538 RABEP1Q15276 862 aa17.05■□□□□ 0.32
LINC00899-201ENST00000421538 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
LINC00899-201ENST00000421538 MSH6P52701 1360 aa17.05■□□□□ 0.32
LINC00899-201ENST00000421538 AK9Q5TCS8 1911 aa17.05■□□□□ 0.32
LINC00899-201ENST00000421538 CDC45O75419 566 aa17.04■□□□□ 0.32
LINC00899-201ENST00000421538 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
LINC00899-201ENST00000421538 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
LINC00899-201ENST00000421538 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
LINC00899-201ENST00000421538 GSPT1P15170 499 aaKnown RBP17.03■□□□□ 0.32
LINC00899-201ENST00000421538 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
LINC00899-201ENST00000421538 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.32
LINC00899-201ENST00000421538 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
LINC00899-201ENST00000421538 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
LINC00899-201ENST00000421538 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.32
LINC00899-201ENST00000421538 CRB1P82279 1406 aa17.02■□□□□ 0.32
LINC00899-201ENST00000421538 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.32
LINC00899-201ENST00000421538 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.31
LINC00899-201ENST00000421538 CHL1O00533 1208 aa17.01■□□□□ 0.31
LINC00899-201ENST00000421538 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
LINC00899-201ENST00000421538 CWC22Q9HCG8 908 aaKnown RBP17.01■□□□□ 0.31
LINC00899-201ENST00000421538 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
LINC00899-201ENST00000421538 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
LINC00899-201ENST00000421538 LRSAM1Q6UWE0 723 aa17.01■□□□□ 0.31
LINC00899-201ENST00000421538 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
LINC00899-201ENST00000421538 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
LINC00899-201ENST00000421538 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
LINC00899-201ENST00000421538 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
LINC00899-201ENST00000421538 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
LINC00899-201ENST00000421538 GPT2Q8TD30 523 aa17■□□□□ 0.31
LINC00899-201ENST00000421538 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
LINC00899-201ENST00000421538 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
LINC00899-201ENST00000421538 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms