RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
HDAC8-212ENST00000421523 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
HDAC8-212ENST00000421523 POTECB2RU33 542 aa8.19□□□□□ -1.1
HDAC8-212ENST00000421523 MAP2K1Q02750 393 aaPredicted RBP8.19□□□□□ -1.1
HDAC8-212ENST00000421523 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
HDAC8-212ENST00000421523 ZNF219Q9P2Y4 722 aaPredicted RBP8.19□□□□□ -1.1
HDAC8-212ENST00000421523 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
HDAC8-212ENST00000421523 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 LMNB1P20700 586 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 CHRNA5P30532 468 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 GRM1Q13255 1194 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 LINC00116Q8NCU8 138 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 ZCRB1Q8TBF4 217 aaKnown RBP8.18□□□□□ -1.1
HDAC8-212ENST00000421523 BEGAINQ9BUH8 593 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 KDM6AO15550 1401 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-212ENST00000421523 MEGF6O75095 1541 aa8.18□□□□□ -1.1
HDAC8-212ENST00000421523 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
HDAC8-212ENST00000421523 RNF39Q9H2S5 420 aa8.17□□□□□ -1.1
HDAC8-212ENST00000421523 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
HDAC8-212ENST00000421523 PASKQ96RG2 1323 aa8.17□□□□□ -1.1
HDAC8-212ENST00000421523 WDR33Q9C0J8 1336 aaKnown RBP8.17□□□□□ -1.1
HDAC8-212ENST00000421523 HMGB2P26583 209 aaKnown RBP8.16□□□□□ -1.1
HDAC8-212ENST00000421523 TMF1P82094 1093 aa8.16□□□□□ -1.1
HDAC8-212ENST00000421523 DGKZQ13574 1117 aa8.16□□□□□ -1.1
HDAC8-212ENST00000421523 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-212ENST00000421523 LTBP1Q14766 1721 aa8.15□□□□□ -1.1
HDAC8-212ENST00000421523 SZT2Q5T011 3432 aa8.15□□□□□ -1.1
HDAC8-212ENST00000421523 FAM208AQ9UK61 1670 aaKnown RBP8.15□□□□□ -1.1
HDAC8-212ENST00000421523 MKI67P46013 3256 aaKnown RBP8.15□□□□□ -1.1
HDAC8-212ENST00000421523 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
HDAC8-212ENST00000421523 NLGN1Q8N2Q7 840 aa8.15□□□□□ -1.1
HDAC8-212ENST00000421523 ABT1Q9ULW3 272 aaKnown RBP8.15□□□□□ -1.1
HDAC8-212ENST00000421523 CCDC88AQ3V6T2 1871 aa8.15□□□□□ -1.11
HDAC8-212ENST00000421523 CUL9Q8IWT3 2517 aa8.14□□□□□ -1.11
HDAC8-212ENST00000421523 TTC21AQ8NDW8 1320 aa8.14□□□□□ -1.11
HDAC8-212ENST00000421523 CASP8AP2Q9UKL3 1982 aa8.14□□□□□ -1.11
HDAC8-212ENST00000421523 RASSF10A6NK89 507 aa8.14□□□□□ -1.11
HDAC8-212ENST00000421523 HOXD11P31277 338 aaPredicted RBP8.14□□□□□ -1.11
HDAC8-212ENST00000421523 DPY19L2Q6NUT2 758 aa8.14□□□□□ -1.11
HDAC8-212ENST00000421523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC8-212ENST00000421523 RGPD2P0DJD1 1756 aa8.14□□□□□ -1.11
HDAC8-212ENST00000421523 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
HDAC8-212ENST00000421523 DLL1O00548 723 aa8.13□□□□□ -1.11
HDAC8-212ENST00000421523 SIK1P57059 783 aa8.13□□□□□ -1.11
HDAC8-212ENST00000421523 ITPK1Q13572 414 aa8.13□□□□□ -1.11
HDAC8-212ENST00000421523 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
HDAC8-212ENST00000421523 THSD7BQ9C0I4 1608 aa8.13□□□□□ -1.11
HDAC8-212ENST00000421523 GYS1P13807 737 aa8.12□□□□□ -1.11
HDAC8-212ENST00000421523 EAPPQ56P03 285 aaPredicted RBP8.12□□□□□ -1.11
HDAC8-212ENST00000421523 TRAPPC3LQ5T215 181 aa8.12□□□□□ -1.11
HDAC8-212ENST00000421523 LDHDQ86WU2 507 aa8.12□□□□□ -1.11
HDAC8-212ENST00000421523 NME9Q86XW9 330 aa8.12□□□□□ -1.11
HDAC8-212ENST00000421523 MAP2P11137 1827 aaKnown RBP8.12□□□□□ -1.11
HDAC8-212ENST00000421523 ITGB4P16144 1822 aa8.12□□□□□ -1.11
HDAC8-212ENST00000421523 KTN1Q86UP2 1357 aaKnown RBP8.11□□□□□ -1.11
HDAC8-212ENST00000421523 CENPJQ9HC77 1338 aaPredicted RBP8.11□□□□□ -1.11
HDAC8-212ENST00000421523 NFKBIEO00221 500 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 DDNO94850 711 aaPredicted RBP8.11□□□□□ -1.11
HDAC8-212ENST00000421523 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
HDAC8-212ENST00000421523 ATP6V1AP38606 617 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 ERFEQ4G0M1 354 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 HABP4Q5JVS0 413 aaKnown RBP8.11□□□□□ -1.11
HDAC8-212ENST00000421523 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 CNKSR2Q8WXI2 1034 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 GCC1Q96CN9 775 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 CAPNS2Q96L46 248 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 RTCBQ9Y3I0 505 aaKnown RBP8.11□□□□□ -1.11
HDAC8-212ENST00000421523 COL6A3P12111 3177 aa8.11□□□□□ -1.11
HDAC8-212ENST00000421523 RFC4P35249 363 aa8.1□□□□□ -1.11
HDAC8-212ENST00000421523 DDR1Q08345 913 aa8.1□□□□□ -1.11
HDAC8-212ENST00000421523 CYP4F22Q6NT55 531 aa8.1□□□□□ -1.11
HDAC8-212ENST00000421523 PIGBQ92521 554 aa8.1□□□□□ -1.11
HDAC8-212ENST00000421523 ARHGEF1Q92888 912 aaKnown RBP8.1□□□□□ -1.11
HDAC8-212ENST00000421523 GPR101Q96P66 508 aaPredicted RBP8.1□□□□□ -1.11
HDAC8-212ENST00000421523 CLEC11AQ9Y240 323 aa8.1□□□□□ -1.11
HDAC8-212ENST00000421523 PCDH11XQ9BZA7 1347 aa8.09□□□□□ -1.11
HDAC8-212ENST00000421523 PCDH11YQ9BZA8 1340 aa8.09□□□□□ -1.11
HDAC8-212ENST00000421523 AOC2O75106 756 aa8.09□□□□□ -1.11
HDAC8-212ENST00000421523 IP6K1Q92551 441 aa8.09□□□□□ -1.11
HDAC8-212ENST00000421523 ZNF692Q9BU19 519 aaPredicted RBP8.09□□□□□ -1.11
HDAC8-212ENST00000421523 MON2Q7Z3U7 1717 aa8.09□□□□□ -1.11
HDAC8-212ENST00000421523 IQCA1LA6NCM1 817 aa8.08□□□□□ -1.12
HDAC8-212ENST00000421523 ECE1P42892 770 aa8.08□□□□□ -1.12
HDAC8-212ENST00000421523 MAP1SQ66K74 1059 aaPredicted RBP8.08□□□□□ -1.12
HDAC8-212ENST00000421523 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
HDAC8-212ENST00000421523 RAPGEF4Q8WZA2 1011 aa8.08□□□□□ -1.12
HDAC8-212ENST00000421523 TAF1DQ9H5J8 278 aaPredicted RBP8.08□□□□□ -1.12
HDAC8-212ENST00000421523 USP31Q70CQ4 1352 aa8.08□□□□□ -1.12
HDAC8-212ENST00000421523 FKBP8Q14318 412 aa8.07□□□□□ -1.12
HDAC8-212ENST00000421523 SRP68Q9UHB9 627 aaKnown RBP8.07□□□□□ -1.12
HDAC8-212ENST00000421523 ASAP1Q9ULH1 1129 aa8.07□□□□□ -1.12
HDAC8-212ENST00000421523 EVC2Q86UK5 1308 aa8.06□□□□□ -1.12
HDAC8-212ENST00000421523 DICER1Q9UPY3 1922 aaKnown RBP8.06□□□□□ -1.12
HDAC8-212ENST00000421523 CYP27B1O15528 508 aa8.06□□□□□ -1.12
HDAC8-212ENST00000421523 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
HDAC8-212ENST00000421523 FXR1P51114 621 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDAC8-212ENST00000421523 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
HDAC8-212ENST00000421523 TTLL6Q8N841 843 aa8.06□□□□□ -1.12
HDAC8-212ENST00000421523 RNF216Q9NWF9 866 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms