RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
LINC00271-201ENST00000421378 BTAF1O14981 1849 aa22.97■■□□□ 1.27
LINC00271-201ENST00000421378 PTF1AQ7RTS3 328 aa22.97■■□□□ 1.27
LINC00271-201ENST00000421378 PIGBQ92521 554 aa22.97■■□□□ 1.27
LINC00271-201ENST00000421378 TNS1Q9HBL0 1735 aaKnown RBP22.95■■□□□ 1.26
LINC00271-201ENST00000421378 CALD1Q05682 793 aaKnown RBP22.95■■□□□ 1.26
LINC00271-201ENST00000421378 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
LINC00271-201ENST00000421378 PAPPAQ13219 1627 aa22.92■■□□□ 1.26
LINC00271-201ENST00000421378 ZNF521Q96K83 1311 aa22.91■■□□□ 1.26
LINC00271-201ENST00000421378 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
LINC00271-201ENST00000421378 SF3B2Q13435 895 aaKnown RBP22.9■■□□□ 1.26
LINC00271-201ENST00000421378 WDR63Q8IWG1 891 aa22.9■■□□□ 1.26
LINC00271-201ENST00000421378 ASAP1Q9ULH1 1129 aa22.89■■□□□ 1.26
LINC00271-201ENST00000421378 APBA3O96018 575 aa22.89■■□□□ 1.25
LINC00271-201ENST00000421378 CCDC125Q86Z20 511 aa22.89■■□□□ 1.25
LINC00271-201ENST00000421378 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
LINC00271-201ENST00000421378 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
LINC00271-201ENST00000421378 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
LINC00271-201ENST00000421378 PALLDQ8WX93 1383 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 IL16Q14005 1332 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 SLC39A6Q13433 755 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 IFT57Q9NWB7 429 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 MIS18AQ9NYP9 233 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 KDM3BQ7LBC6 1761 aa22.88■■□□□ 1.25
LINC00271-201ENST00000421378 SMARCC1Q92922 1105 aaPredicted RBP22.87■■□□□ 1.25
LINC00271-201ENST00000421378 BABAM1Q9NWV8 329 aa22.87■■□□□ 1.25
LINC00271-201ENST00000421378 TSPYL4Q9UJ04 414 aa22.87■■□□□ 1.25
LINC00271-201ENST00000421378 ZBED9Q6R2W3 1325 aa22.86■■□□□ 1.25
LINC00271-201ENST00000421378 GNAI1P63096 354 aa22.86■■□□□ 1.25
LINC00271-201ENST00000421378 UBR2Q8IWV8 1755 aa22.86■■□□□ 1.25
LINC00271-201ENST00000421378 UPF1Q92900 1129 aaKnown RBP eCLIP22.85■■□□□ 1.25
LINC00271-201ENST00000421378 RGPD3A6NKT7 1758 aaPredicted RBP22.85■■□□□ 1.25
LINC00271-201ENST00000421378 RGPD4Q7Z3J3 1758 aa22.85■■□□□ 1.25
LINC00271-201ENST00000421378 CHL1O00533 1208 aa22.84■■□□□ 1.25
LINC00271-201ENST00000421378 ZNF853P0CG23 659 aa22.84■■□□□ 1.25
LINC00271-201ENST00000421378 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
LINC00271-201ENST00000421378 LY75O60449 1722 aa22.84■■□□□ 1.25
LINC00271-201ENST00000421378 PLSCR1O15162 318 aa22.84■■□□□ 1.25
LINC00271-201ENST00000421378 GOLGA2Q08379 1002 aa22.84■■□□□ 1.25
LINC00271-201ENST00000421378 KCPQ6ZWJ8 1503 aa22.84■■□□□ 1.25
LINC00271-201ENST00000421378 KCNQ3O43525 872 aa22.83■■□□□ 1.25
LINC00271-201ENST00000421378 BAG6P46379 1132 aa22.83■■□□□ 1.25
LINC00271-201ENST00000421378 MBIPQ9NS73 344 aa22.83■■□□□ 1.25
LINC00271-201ENST00000421378 PTCD1O75127 700 aaKnown RBP22.82■■□□□ 1.24
LINC00271-201ENST00000421378 SPINK5Q9NQ38 1064 aaPredicted RBP22.81■■□□□ 1.24
LINC00271-201ENST00000421378 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
LINC00271-201ENST00000421378 RBM42Q9BTD8 480 aaKnown RBP22.8■■□□□ 1.24
LINC00271-201ENST00000421378 MYH16Q9H6N6 1097 aa22.8■■□□□ 1.24
LINC00271-201ENST00000421378 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
LINC00271-201ENST00000421378 SIK1P57059 783 aa22.8■■□□□ 1.24
LINC00271-201ENST00000421378 TSR2Q969E8 191 aaKnown RBP22.8■■□□□ 1.24
LINC00271-201ENST00000421378 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
LINC00271-201ENST00000421378 E9PSI1 815 aa22.79■■□□□ 1.24
LINC00271-201ENST00000421378 EN1Q05925 392 aaPredicted RBP22.79■■□□□ 1.24
LINC00271-201ENST00000421378 DEFB132Q7Z7B7 95 aa22.79■■□□□ 1.24
LINC00271-201ENST00000421378 FANCIQ9NVI1 1328 aa22.79■■□□□ 1.24
LINC00271-201ENST00000421378 EIF4A1P60842 406 aaKnown RBP22.78■■□□□ 1.24
LINC00271-201ENST00000421378 ZNF831Q5JPB2 1677 aa22.77■■□□□ 1.24
LINC00271-201ENST00000421378 HEG1Q9ULI3 1381 aa22.77■■□□□ 1.24
LINC00271-201ENST00000421378 CDCA7LQ96GN5 454 aa22.77■■□□□ 1.24
LINC00271-201ENST00000421378 CCNL1Q9UK58 526 aaPredicted RBP22.77■■□□□ 1.24
LINC00271-201ENST00000421378 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 CAMKK2Q96RR4 588 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 CICQ96RK0 1608 aaPredicted RBP22.76■■□□□ 1.23
LINC00271-201ENST00000421378 ATP6V1AP38606 617 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 SLFN5Q08AF3 891 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 EZH2Q15910 746 aaKnown RBP22.76■■□□□ 1.23
LINC00271-201ENST00000421378 VSIG10Q8N0Z9 540 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 SLC4A9Q96Q91 983 aa22.76■■□□□ 1.23
LINC00271-201ENST00000421378 PROM2Q8N271 834 aa22.75■■□□□ 1.23
LINC00271-201ENST00000421378 KCNQ4P56696 695 aa22.74■■□□□ 1.23
LINC00271-201ENST00000421378 TJP1Q07157 1748 aa22.74■■□□□ 1.23
LINC00271-201ENST00000421378 RREB1Q92766 1687 aa22.73■■□□□ 1.23
LINC00271-201ENST00000421378 SNRPA1P09661 255 aaKnown RBP22.73■■□□□ 1.23
LINC00271-201ENST00000421378 LRRC4BQ9NT99 713 aa22.73■■□□□ 1.23
LINC00271-201ENST00000421378 C5P01031 1676 aa22.73■■□□□ 1.23
LINC00271-201ENST00000421378 KRT24Q2M2I5 525 aa22.72■■□□□ 1.23
LINC00271-201ENST00000421378 GIGYF1O75420 1035 aaPredicted RBP22.72■■□□□ 1.23
LINC00271-201ENST00000421378 ITPK1Q13572 414 aa22.72■■□□□ 1.23
LINC00271-201ENST00000421378 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
LINC00271-201ENST00000421378 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
LINC00271-201ENST00000421378 TRMT2AQ8IZ69 625 aaKnown RBP22.71■■□□□ 1.23
LINC00271-201ENST00000421378 TAF1LQ8IZX4 1826 aa22.71■■□□□ 1.23
LINC00271-201ENST00000421378 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
LINC00271-201ENST00000421378 DUSP27Q5VZP5 1158 aa22.7■■□□□ 1.22
LINC00271-201ENST00000421378 DNAJC10Q8IXB1 793 aa22.7■■□□□ 1.22
LINC00271-201ENST00000421378 TEX13AQ9BXU3 409 aaPredicted RBP22.7■■□□□ 1.22
LINC00271-201ENST00000421378 HMGB2P26583 209 aaKnown RBP22.69■■□□□ 1.22
LINC00271-201ENST00000421378 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
LINC00271-201ENST00000421378 NUP188Q5SRE5 1749 aa22.69■■□□□ 1.22
LINC00271-201ENST00000421378 HOXB7P09629 217 aa22.68■■□□□ 1.22
LINC00271-201ENST00000421378 EXOSC9Q06265 439 aaKnown RBP22.68■■□□□ 1.22
LINC00271-201ENST00000421378 ELL2O00472 640 aaPredicted RBP22.67■■□□□ 1.22
LINC00271-201ENST00000421378 STARD3NLO95772 234 aa22.67■■□□□ 1.22
LINC00271-201ENST00000421378 LINC00116Q8NCU8 138 aa22.67■■□□□ 1.22
LINC00271-201ENST00000421378 C4BP0C0L5 1744 aa22.67■■□□□ 1.22
LINC00271-201ENST00000421378 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms