RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
PTCH1-206ENST00000421141 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
PTCH1-206ENST00000421141 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
PTCH1-206ENST00000421141 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
PTCH1-206ENST00000421141 PAXIP1Q6ZW49 1069 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-206ENST00000421141 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 PTPRCP08575 1304 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
PTCH1-206ENST00000421141 ZFYVE9O95405 1425 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 COL17A1Q9UMD9 1497 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-206ENST00000421141 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
PTCH1-206ENST00000421141 TMEM2Q9UHN6 1383 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-206ENST00000421141 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-206ENST00000421141 MPHOSPH10O00566 681 aaKnown RBP12.85□□□□□ -0.35
PTCH1-206ENST00000421141 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
PTCH1-206ENST00000421141 GCP02774 474 aa12.84□□□□□ -0.35
PTCH1-206ENST00000421141 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-206ENST00000421141 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
PTCH1-206ENST00000421141 GPTP24298 496 aa12.84□□□□□ -0.35
PTCH1-206ENST00000421141 CCDC69A6NI79 296 aa12.84□□□□□ -0.35
PTCH1-206ENST00000421141 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
PTCH1-206ENST00000421141 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
PTCH1-206ENST00000421141 PRM3Q9NNZ6 103 aa12.84□□□□□ -0.35
PTCH1-206ENST00000421141 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-206ENST00000421141 YEATS2Q9ULM3 1422 aa12.84□□□□□ -0.35
PTCH1-206ENST00000421141 FOXD4L6Q3SYB3 417 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-206ENST00000421141 FOXD4L3Q6VB84 417 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-206ENST00000421141 CTNNA3Q9UI47 895 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 USP21Q9UK80 565 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 USP5P45974 858 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 MYO1BO43795 1136 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 IDH1O75874 414 aaKnown RBP12.83□□□□□ -0.36
PTCH1-206ENST00000421141 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-206ENST00000421141 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 AIDAQ96BJ3 306 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-206ENST00000421141 NLRP1Q9C000 1473 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.36
PTCH1-206ENST00000421141 BCAR3O75815 825 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
PTCH1-206ENST00000421141 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 PDE4AP27815 886 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 MLH3Q9UHC1 1453 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
PTCH1-206ENST00000421141 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-206ENST00000421141 TRIM22Q8IYM9 498 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 FOSBP53539 338 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 TPM3P06753 285 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 KRI1Q8N9T8 703 aaKnown RBP12.81□□□□□ -0.36
PTCH1-206ENST00000421141 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
PTCH1-206ENST00000421141 BECN2A8MW95 431 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 TXLNAP40222 546 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
PTCH1-206ENST00000421141 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
PTCH1-206ENST00000421141 PIK3C2GO75747 1445 aa12.8□□□□□ -0.36
PTCH1-206ENST00000421141 MAP3K12Q12852 859 aa12.8□□□□□ -0.36
PTCH1-206ENST00000421141 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-206ENST00000421141 MCM2P49736 904 aa12.8□□□□□ -0.36
PTCH1-206ENST00000421141 BICD2Q8TD16 824 aa12.8□□□□□ -0.36
PTCH1-206ENST00000421141 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-206ENST00000421141 EPS15P42566 896 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-206ENST00000421141 C22orf23Q9BZE7 217 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 PDCP20941 246 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-206ENST00000421141 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 IP6K1Q92551 441 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 PZPP20742 1482 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
PTCH1-206ENST00000421141 SPTY2D1Q68D10 685 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-206ENST00000421141 GLIPR1L2Q4G1C9 344 aa12.78□□□□□ -0.36
PTCH1-206ENST00000421141 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
PTCH1-206ENST00000421141 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
PTCH1-206ENST00000421141 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
PTCH1-206ENST00000421141 FLIIQ13045 1269 aa12.78□□□□□ -0.36
PTCH1-206ENST00000421141 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
PTCH1-206ENST00000421141 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-206ENST00000421141 SKOR2Q2VWA4 1001 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-206ENST00000421141 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
PTCH1-206ENST00000421141 CDKL5O76039 1030 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms