RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 TNPO1Q92973 898 aaKnown RBP10.81□□□□□ -0.68
TRIM49D1-201ENST00000420869 USP26Q9BXU7 913 aa10.81□□□□□ -0.68
TRIM49D1-201ENST00000420869 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
TRIM49D1-201ENST00000420869 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
TRIM49D1-201ENST00000420869 TRAK2O60296 914 aa10.8□□□□□ -0.68
TRIM49D1-201ENST00000420869 HMMRO75330 724 aa10.8□□□□□ -0.68
TRIM49D1-201ENST00000420869 AMPHP49418 695 aa10.8□□□□□ -0.68
TRIM49D1-201ENST00000420869 C16orf71Q8IYS4 520 aaPredicted RBP10.8□□□□□ -0.68
TRIM49D1-201ENST00000420869 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
TRIM49D1-201ENST00000420869 GNAT3A8MTJ3 354 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 KCNA6P17658 529 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 SDSP20132 328 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 MIS18AQ9NYP9 233 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 ABCC6O95255 1503 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 SOX12O15370 315 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 PTMSP20962 102 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 FAM43AQ8N2R8 423 aa10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 IBTKQ9P2D0 1353 aaPredicted RBP10.79□□□□□ -0.68
TRIM49D1-201ENST00000420869 LAMA4Q16363 1823 aa10.78□□□□□ -0.68
TRIM49D1-201ENST00000420869 SMARCA5O60264 1052 aaPredicted RBP10.78□□□□□ -0.68
TRIM49D1-201ENST00000420869 NLRP6P59044 892 aa10.78□□□□□ -0.68
TRIM49D1-201ENST00000420869 CCDC30Q5VVM6 783 aa10.78□□□□□ -0.68
TRIM49D1-201ENST00000420869 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
TRIM49D1-201ENST00000420869 GBP4Q96PP9 640 aa10.78□□□□□ -0.68
TRIM49D1-201ENST00000420869 F6X3S4 739 aa10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 GNAI2P04899 355 aa10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 FLIIQ13045 1269 aa10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 IL17REQ8NFR9 667 aa10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 STK31Q9BXU1 1019 aa10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
TRIM49D1-201ENST00000420869 GOLGA6L3A6NEY3 463 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 CYP2E1P05181 493 aaPredicted RBP10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 GNAI3P08754 354 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 PDE1AP54750 535 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 AOX1Q06278 1338 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 PXDNQ92626 1479 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 NUP188Q5SRE5 1749 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 XRCC6P12956 609 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 CASC1Q6TDU7 716 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 IL17RAQ96F46 866 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 UBR2Q8IWV8 1755 aa10.76□□□□□ -0.69
TRIM49D1-201ENST00000420869 MST1RQ04912 1400 aa10.75□□□□□ -0.69
TRIM49D1-201ENST00000420869 REC8O95072 547 aa10.75□□□□□ -0.69
TRIM49D1-201ENST00000420869 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
TRIM49D1-201ENST00000420869 SKOR2Q2VWA4 1001 aaPredicted RBP10.75□□□□□ -0.69
TRIM49D1-201ENST00000420869 GLI3P10071 1580 aa10.75□□□□□ -0.69
TRIM49D1-201ENST00000420869 ERC2O15083 957 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 HOXB7P09629 217 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 SSFA2P28290 1259 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 SLC4A10Q6U841 1118 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 IP6K1Q92551 441 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 STAP2Q9UGK3 403 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
TRIM49D1-201ENST00000420869 MRE11P49959 708 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 FKBP5Q13451 457 aaPredicted RBP10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 ABTB2Q8N961 1025 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 MYH7P12883 1935 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 PNMA6EA0A0J9YXQ4 647 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 LRRCC1Q9C099 1032 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 EXOC6BQ9Y2D4 811 aa10.73□□□□□ -0.69
TRIM49D1-201ENST00000420869 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 PAPPAQ13219 1627 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 TJP1Q07157 1748 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 ABCA3Q99758 1704 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 BAG4O95429 457 aaKnown RBP10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 MX1P20591 662 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 NUCB2P80303 420 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 SRCIN1Q9C0H9 1055 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 USP44Q9H0E7 712 aa10.72□□□□□ -0.69
TRIM49D1-201ENST00000420869 HEG1Q9ULI3 1381 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 APBB1O00213 710 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 EPB41L2O43491 1005 aaKnown RBP10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 ST18O60284 1047 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 POLA2Q14181 598 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 NUTM2GQ5VZR2 741 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 ESYT1Q9BSJ8 1104 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 PANK2Q9BZ23 570 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 GZF1Q9H116 711 aaPredicted RBP10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 GRPEL1Q9HAV7 217 aa10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 LRRFIP2Q9Y608 721 aaKnown RBP10.71□□□□□ -0.69
TRIM49D1-201ENST00000420869 MRC1P22897 1456 aa10.71□□□□□ -0.7
TRIM49D1-201ENST00000420869 CWC22Q9HCG8 908 aaKnown RBP10.7□□□□□ -0.7
TRIM49D1-201ENST00000420869 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
TRIM49D1-201ENST00000420869 ADCY9O60503 1353 aa10.7□□□□□ -0.7
TRIM49D1-201ENST00000420869 NPHP4O75161 1426 aaPredicted RBP10.7□□□□□ -0.7
TRIM49D1-201ENST00000420869 ANAPC15P60006 121 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 EIF4A1P60842 406 aaKnown RBP10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 KLHL40Q2TBA0 621 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 HDGFL1Q5TGJ6 251 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 NBPF6Q5VWK0 638 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 USHBP1Q8N6Y0 703 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 NBPF4Q96M43 638 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms