RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ARHGAP45Q92619 1136 aa9.29□□□□□ -0.92
BDNF-209ENST00000420794 SLC52A2Q9HAB3 445 aa9.29□□□□□ -0.92
BDNF-209ENST00000420794 PTPRCP08575 1304 aa9.29□□□□□ -0.92
BDNF-209ENST00000420794 SPATA31A6Q5VVP1 1343 aa9.29□□□□□ -0.92
BDNF-209ENST00000420794 GNAI3P08754 354 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 THRAP3Q9Y2W1 955 aaKnown RBP9.28□□□□□ -0.92
BDNF-209ENST00000420794 AKAP12Q02952 1782 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 RGS3P49796 1198 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 UNC5CLQ8IV45 518 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 HOXB7P09629 217 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 TSPYL6Q8N831 410 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
BDNF-209ENST00000420794 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
BDNF-209ENST00000420794 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
BDNF-209ENST00000420794 MYL6BP14649 208 aa9.27□□□□□ -0.92
BDNF-209ENST00000420794 ZNF790Q6PG37 636 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
BDNF-209ENST00000420794 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 TRIM27P14373 513 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 KIF6Q6ZMV9 814 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 SRCIN1Q9C0H9 1055 aa9.27□□□□□ -0.93
BDNF-209ENST00000420794 FLIIQ13045 1269 aa9.26□□□□□ -0.93
BDNF-209ENST00000420794 RGPD8O14715 1765 aaPredicted RBP9.26□□□□□ -0.93
BDNF-209ENST00000420794 CRB1P82279 1406 aa9.26□□□□□ -0.93
BDNF-209ENST00000420794 UBTFL1P0CB47 393 aaPredicted RBP9.26□□□□□ -0.93
BDNF-209ENST00000420794 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
BDNF-209ENST00000420794 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
BDNF-209ENST00000420794 TRPC5Q9UL62 973 aaPredicted RBP9.26□□□□□ -0.93
BDNF-209ENST00000420794 HSPA1LP34931 641 aa9.26□□□□□ -0.93
BDNF-209ENST00000420794 KRT24Q2M2I5 525 aa9.26□□□□□ -0.93
BDNF-209ENST00000420794 TMEM57Q8N5G2 664 aa9.26□□□□□ -0.93
BDNF-209ENST00000420794 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
BDNF-209ENST00000420794 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
BDNF-209ENST00000420794 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
BDNF-209ENST00000420794 PXDNQ92626 1479 aa9.25□□□□□ -0.93
BDNF-209ENST00000420794 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
BDNF-209ENST00000420794 EIF4A1P60842 406 aaKnown RBP9.24□□□□□ -0.93
BDNF-209ENST00000420794 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
BDNF-209ENST00000420794 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
BDNF-209ENST00000420794 APBB1O00213 710 aa9.24□□□□□ -0.93
BDNF-209ENST00000420794 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
BDNF-209ENST00000420794 STRCQ7RTU9 1775 aa9.24□□□□□ -0.93
BDNF-209ENST00000420794 GNAI2P04899 355 aa9.23□□□□□ -0.93
BDNF-209ENST00000420794 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
BDNF-209ENST00000420794 CYP27B1O15528 508 aa9.23□□□□□ -0.93
BDNF-209ENST00000420794 DNAAF4Q8WXU2 420 aa9.23□□□□□ -0.93
BDNF-209ENST00000420794 KAT6BQ8WYB5 2073 aa9.23□□□□□ -0.93
BDNF-209ENST00000420794 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
BDNF-209ENST00000420794 QTRT2Q9H974 415 aaKnown RBP9.23□□□□□ -0.93
BDNF-209ENST00000420794 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
BDNF-209ENST00000420794 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
BDNF-209ENST00000420794 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
BDNF-209ENST00000420794 IQSEC2Q5JU85 1478 aa9.22□□□□□ -0.93
BDNF-209ENST00000420794 SLIT3O75094 1523 aa9.22□□□□□ -0.93
BDNF-209ENST00000420794 ZNF772Q68DY9 489 aaPredicted RBP9.22□□□□□ -0.93
BDNF-209ENST00000420794 F6X3S4 739 aa9.22□□□□□ -0.93
BDNF-209ENST00000420794 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
BDNF-209ENST00000420794 ZNF496Q96IT1 587 aaPredicted RBP9.22□□□□□ -0.93
BDNF-209ENST00000420794 DDX21Q9NR30 783 aaKnown RBP eCLIP9.22□□□□□ -0.93
BDNF-209ENST00000420794 HSP90B1P14625 803 aaKnown RBP9.21□□□□□ -0.93
BDNF-209ENST00000420794 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.93
BDNF-209ENST00000420794 HSP90AB4PQ58FF6 505 aa9.21□□□□□ -0.93
BDNF-209ENST00000420794 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.93
BDNF-209ENST00000420794 PI4KAP2A4QPH2 592 aa9.21□□□□□ -0.93
BDNF-209ENST00000420794 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.93
BDNF-209ENST00000420794 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.93
BDNF-209ENST00000420794 RPAP2Q8IXW5 612 aaPredicted RBP9.21□□□□□ -0.93
BDNF-209ENST00000420794 PI4KAP1Q8N8J0 262 aa9.21□□□□□ -0.93
BDNF-209ENST00000420794 AFF2P51816 1311 aa9.21□□□□□ -0.94
BDNF-209ENST00000420794 VPS72Q15906 364 aa9.21□□□□□ -0.94
BDNF-209ENST00000420794 ANXA1P04083 346 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 NFAT5O94916 1531 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 MSH5O43196 834 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 KCNQ3O43525 872 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 HSP90AB3PQ58FF7 597 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 COPS6Q7L5N1 327 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 NRKQ7Z2Y5 1582 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 KSR2Q6VAB6 950 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 GCC1Q96CN9 775 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 C1orf115Q9H7X2 142 aa9.2□□□□□ -0.94
BDNF-209ENST00000420794 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
BDNF-209ENST00000420794 XAGE3Q8WTP9 111 aa9.19□□□□□ -0.94
BDNF-209ENST00000420794 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
BDNF-209ENST00000420794 GPATCH3Q96I76 525 aa9.19□□□□□ -0.94
BDNF-209ENST00000420794 ZNF652Q9Y2D9 606 aa9.19□□□□□ -0.94
BDNF-209ENST00000420794 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
BDNF-209ENST00000420794 MYD88Q99836 296 aa9.19□□□□□ -0.94
BDNF-209ENST00000420794 SPATA31A5Q5VU36 1347 aa9.18□□□□□ -0.94
BDNF-209ENST00000420794 SPATA31A7Q8IWB4 1347 aa9.18□□□□□ -0.94
BDNF-209ENST00000420794 G3BP1Q13283 466 aaKnown RBP eCLIP9.18□□□□□ -0.94
BDNF-209ENST00000420794 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
BDNF-209ENST00000420794 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms