RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
RFX3-205ENST00000420720 CARD10Q9BWT7 1032 aa10.13□□□□□ -0.79
RFX3-205ENST00000420720 CIZ1Q9ULV3 898 aaPredicted RBP10.13□□□□□ -0.79
RFX3-205ENST00000420720 KTN1Q86UP2 1357 aaKnown RBP10.13□□□□□ -0.79
RFX3-205ENST00000420720 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
RFX3-205ENST00000420720 EXOC5O00471 708 aa10.12□□□□□ -0.79
RFX3-205ENST00000420720 TMC1Q8TDI8 760 aa10.12□□□□□ -0.79
RFX3-205ENST00000420720 SLC16A10Q8TF71 515 aa10.12□□□□□ -0.79
RFX3-205ENST00000420720 NMRK2Q9NPI5 230 aa10.12□□□□□ -0.79
RFX3-205ENST00000420720 TNRC18O15417 2968 aaPredicted RBP10.11□□□□□ -0.79
RFX3-205ENST00000420720 AKAP12Q02952 1782 aa10.11□□□□□ -0.79
RFX3-205ENST00000420720 PNPLA7Q6ZV29 1317 aa10.11□□□□□ -0.79
RFX3-205ENST00000420720 NME9Q86XW9 330 aa10.11□□□□□ -0.79
RFX3-205ENST00000420720 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
RFX3-205ENST00000420720 WNK3Q9BYP7 1800 aa10.11□□□□□ -0.79
RFX3-205ENST00000420720 PIK3C2AO00443 1686 aa10.1□□□□□ -0.79
RFX3-205ENST00000420720 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
RFX3-205ENST00000420720 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
RFX3-205ENST00000420720 SLC12A5Q9H2X9 1139 aa10.1□□□□□ -0.79
RFX3-205ENST00000420720 LRRC4BQ9NT99 713 aa10.1□□□□□ -0.79
RFX3-205ENST00000420720 TRPM1Q7Z4N2 1603 aa10.1□□□□□ -0.79
RFX3-205ENST00000420720 HDGFL2Q7Z4V5 671 aaPredicted RBP10.09□□□□□ -0.79
RFX3-205ENST00000420720 ACSBG1Q96GR2 724 aa10.09□□□□□ -0.79
RFX3-205ENST00000420720 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
RFX3-205ENST00000420720 USP31Q70CQ4 1352 aa10.09□□□□□ -0.79
RFX3-205ENST00000420720 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
RFX3-205ENST00000420720 NHSQ6T4R5 1651 aa10.09□□□□□ -0.79
RFX3-205ENST00000420720 COL18A1P39060 1754 aa10.09□□□□□ -0.79
RFX3-205ENST00000420720 MKRN3Q13064 507 aaKnown RBP10.08□□□□□ -0.8
RFX3-205ENST00000420720 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
RFX3-205ENST00000420720 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
RFX3-205ENST00000420720 ANKRD24Q8TF21 1146 aa10.07□□□□□ -0.8
RFX3-205ENST00000420720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
RFX3-205ENST00000420720 NFAT5O94916 1531 aa10.07□□□□□ -0.8
RFX3-205ENST00000420720 ERBB3P21860 1342 aa10.07□□□□□ -0.8
RFX3-205ENST00000420720 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
RFX3-205ENST00000420720 IL2RBP14784 551 aa10.06□□□□□ -0.8
RFX3-205ENST00000420720 GOLGA2Q08379 1002 aa10.06□□□□□ -0.8
RFX3-205ENST00000420720 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
RFX3-205ENST00000420720 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
RFX3-205ENST00000420720 TONSLQ96HA7 1378 aa10.05□□□□□ -0.8
RFX3-205ENST00000420720 FSTL1Q12841 308 aa10.05□□□□□ -0.8
RFX3-205ENST00000420720 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
RFX3-205ENST00000420720 MLLT1Q03111 559 aaPredicted RBP10.04□□□□□ -0.8
RFX3-205ENST00000420720 LTV1Q96GA3 475 aaPredicted RBP10.04□□□□□ -0.8
RFX3-205ENST00000420720 BTAF1O14981 1849 aa10.04□□□□□ -0.8
RFX3-205ENST00000420720 A0A1W2PP64 1363 aa10.03□□□□□ -0.8
RFX3-205ENST00000420720 EDC4Q6P2E9 1401 aaKnown RBP10.03□□□□□ -0.8
RFX3-205ENST00000420720 IP6K1Q92551 441 aa10.03□□□□□ -0.8
RFX3-205ENST00000420720 RNF25Q96BH1 459 aaPredicted RBP10.03□□□□□ -0.8
RFX3-205ENST00000420720 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
RFX3-205ENST00000420720 CD2APQ9Y5K6 639 aa10.03□□□□□ -0.8
RFX3-205ENST00000420720 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 FOXN1O15353 648 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 FBLN1P23142 703 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 RGS19P49795 217 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 CDAN1Q8IWY9 1227 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
RFX3-205ENST00000420720 ABHD8Q96I13 439 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 ABCC6O95255 1503 aa10.02□□□□□ -0.81
RFX3-205ENST00000420720 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
RFX3-205ENST00000420720 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
RFX3-205ENST00000420720 COG3Q96JB2 828 aa10.01□□□□□ -0.81
RFX3-205ENST00000420720 TESK2Q96S53 571 aa10.01□□□□□ -0.81
RFX3-205ENST00000420720 IGSF1Q8N6C5 1336 aa10.01□□□□□ -0.81
RFX3-205ENST00000420720 MON2Q7Z3U7 1717 aa10□□□□□ -0.81
RFX3-205ENST00000420720 AMPHP49418 695 aa10□□□□□ -0.81
RFX3-205ENST00000420720 PRDM10Q9NQV6 1147 aa10□□□□□ -0.81
RFX3-205ENST00000420720 RGPD5Q99666 1765 aa10□□□□□ -0.81
RFX3-205ENST00000420720 MAP3K19Q56UN5 1328 aa10□□□□□ -0.81
RFX3-205ENST00000420720 HOXC9P31274 260 aa9.99□□□□□ -0.81
RFX3-205ENST00000420720 KCNQ4P56696 695 aa9.99□□□□□ -0.81
RFX3-205ENST00000420720 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
RFX3-205ENST00000420720 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
RFX3-205ENST00000420720 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
RFX3-205ENST00000420720 MARVELD3Q96A59 401 aa9.98□□□□□ -0.81
RFX3-205ENST00000420720 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
RFX3-205ENST00000420720 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
RFX3-205ENST00000420720 C10orf71Q711Q0 1435 aa9.98□□□□□ -0.81
RFX3-205ENST00000420720 SLC24A1O60721 1099 aa9.97□□□□□ -0.81
RFX3-205ENST00000420720 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
RFX3-205ENST00000420720 RRS1Q15050 365 aaKnown RBP9.97□□□□□ -0.81
RFX3-205ENST00000420720 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
RFX3-205ENST00000420720 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
RFX3-205ENST00000420720 FYB1O15117 783 aa9.96□□□□□ -0.82
RFX3-205ENST00000420720 TMF1P82094 1093 aa9.96□□□□□ -0.82
RFX3-205ENST00000420720 USHBP1Q8N6Y0 703 aa9.96□□□□□ -0.82
RFX3-205ENST00000420720 ZCRB1Q8TBF4 217 aaKnown RBP9.96□□□□□ -0.82
RFX3-205ENST00000420720 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
RFX3-205ENST00000420720 PXDNLA1KZ92 1463 aa9.96□□□□□ -0.82
RFX3-205ENST00000420720 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
RFX3-205ENST00000420720 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
RFX3-205ENST00000420720 NBPF6Q5VWK0 638 aa9.95□□□□□ -0.82
RFX3-205ENST00000420720 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
RFX3-205ENST00000420720 NBPF4Q96M43 638 aa9.95□□□□□ -0.82
RFX3-205ENST00000420720 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
RFX3-205ENST00000420720 SMC1BQ8NDV3 1235 aa9.94□□□□□ -0.82
RFX3-205ENST00000420720 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
RFX3-205ENST00000420720 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
RFX3-205ENST00000420720 KIAA1551Q9HCM1 1747 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms