RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
CDRT15-201ENST00000420162 MRC1P22897 1456 aa19.84■□□□□ 0.77
CDRT15-201ENST00000420162 PLSCR1O15162 318 aa19.83■□□□□ 0.77
CDRT15-201ENST00000420162 BAG6P46379 1132 aa19.83■□□□□ 0.77
CDRT15-201ENST00000420162 TAF7Q15545 349 aaPredicted RBP19.83■□□□□ 0.77
CDRT15-201ENST00000420162 BTAF1O14981 1849 aa19.82■□□□□ 0.76
CDRT15-201ENST00000420162 CALD1Q05682 793 aaKnown RBP19.82■□□□□ 0.76
CDRT15-201ENST00000420162 THUMPD2Q9BTF0 503 aaKnown RBP19.81■□□□□ 0.76
CDRT15-201ENST00000420162 TNS1Q9HBL0 1735 aaKnown RBP19.81■□□□□ 0.76
CDRT15-201ENST00000420162 WWC1Q8IX03 1113 aa19.8■□□□□ 0.76
CDRT15-201ENST00000420162 ATG3Q9NT62 314 aa19.8■□□□□ 0.76
CDRT15-201ENST00000420162 ASAP1Q9ULH1 1129 aa19.8■□□□□ 0.76
CDRT15-201ENST00000420162 BTBD11A6QL63 1104 aa19.79■□□□□ 0.76
CDRT15-201ENST00000420162 SOCS7O14512 581 aa19.79■□□□□ 0.76
CDRT15-201ENST00000420162 BABAM1Q9NWV8 329 aa19.79■□□□□ 0.76
CDRT15-201ENST00000420162 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
CDRT15-201ENST00000420162 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
CDRT15-201ENST00000420162 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
CDRT15-201ENST00000420162 HMGB2P26583 209 aaKnown RBP19.77■□□□□ 0.76
CDRT15-201ENST00000420162 TTC5Q8N0Z6 440 aa19.77■□□□□ 0.76
CDRT15-201ENST00000420162 CAMKK2Q96RR4 588 aa19.77■□□□□ 0.76
CDRT15-201ENST00000420162 PALLDQ8WX93 1383 aa19.77■□□□□ 0.76
CDRT15-201ENST00000420162 EN1Q05925 392 aaPredicted RBP19.76■□□□□ 0.75
CDRT15-201ENST00000420162 ZNF790Q6PG37 636 aa19.76■□□□□ 0.75
CDRT15-201ENST00000420162 WDR63Q8IWG1 891 aa19.76■□□□□ 0.75
CDRT15-201ENST00000420162 SLC39A6Q13433 755 aa19.75■□□□□ 0.75
CDRT15-201ENST00000420162 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
CDRT15-201ENST00000420162 DEFB132Q7Z7B7 95 aa19.75■□□□□ 0.75
CDRT15-201ENST00000420162 CFAP44Q96MT7 982 aa19.75■□□□□ 0.75
CDRT15-201ENST00000420162 IL16Q14005 1332 aa19.75■□□□□ 0.75
CDRT15-201ENST00000420162 CHL1O00533 1208 aa19.74■□□□□ 0.75
CDRT15-201ENST00000420162 GNAI1P63096 354 aa19.74■□□□□ 0.75
CDRT15-201ENST00000420162 TXNRD1Q16881 649 aa19.74■□□□□ 0.75
CDRT15-201ENST00000420162 IFT57Q9NWB7 429 aa19.74■□□□□ 0.75
CDRT15-201ENST00000420162 RGPD3A6NKT7 1758 aaPredicted RBP19.74■□□□□ 0.75
CDRT15-201ENST00000420162 RGPD4Q7Z3J3 1758 aa19.74■□□□□ 0.75
CDRT15-201ENST00000420162 LOC102724428A0A0B4J2F2 783 aa19.73■□□□□ 0.75
CDRT15-201ENST00000420162 SIK1P57059 783 aa19.73■□□□□ 0.75
CDRT15-201ENST00000420162 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
CDRT15-201ENST00000420162 TSPYL4Q9UJ04 414 aa19.73■□□□□ 0.75
CDRT15-201ENST00000420162 PTCD1O75127 700 aaKnown RBP19.72■□□□□ 0.75
CDRT15-201ENST00000420162 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
CDRT15-201ENST00000420162 EZH2Q15910 746 aaKnown RBP19.72■□□□□ 0.75
CDRT15-201ENST00000420162 PROM2Q8N271 834 aa19.72■□□□□ 0.75
CDRT15-201ENST00000420162 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
CDRT15-201ENST00000420162 CCNL1Q9UK58 526 aaPredicted RBP19.72■□□□□ 0.75
CDRT15-201ENST00000420162 LAS1LQ9Y4W2 734 aaKnown RBP19.72■□□□□ 0.75
CDRT15-201ENST00000420162 LY75O60449 1722 aa19.71■□□□□ 0.75
CDRT15-201ENST00000420162 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
CDRT15-201ENST00000420162 VSIG10Q8N0Z9 540 aa19.71■□□□□ 0.75
CDRT15-201ENST00000420162 FMNL2Q96PY5 1086 aa19.71■□□□□ 0.75
CDRT15-201ENST00000420162 PAPPAQ13219 1627 aa19.71■□□□□ 0.75
CDRT15-201ENST00000420162 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
CDRT15-201ENST00000420162 KCNQ3O43525 872 aa19.7■□□□□ 0.74
CDRT15-201ENST00000420162 ZNF496Q96IT1 587 aaPredicted RBP19.7■□□□□ 0.74
CDRT15-201ENST00000420162 ATP6V1AP38606 617 aa19.69■□□□□ 0.74
CDRT15-201ENST00000420162 TEX13AQ9BXU3 409 aaPredicted RBP19.68■□□□□ 0.74
CDRT15-201ENST00000420162 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 UBR2Q8IWV8 1755 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 KCPQ6ZWJ8 1503 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 EIF4A1P60842 406 aaKnown RBP19.67■□□□□ 0.74
CDRT15-201ENST00000420162 GOLGA2Q08379 1002 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 SLC4A9Q96Q91 983 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 MBIPQ9NS73 344 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 LRRC4BQ9NT99 713 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 HEG1Q9ULI3 1381 aa19.67■□□□□ 0.74
CDRT15-201ENST00000420162 SNRPA1P09661 255 aaKnown RBP19.66■□□□□ 0.74
CDRT15-201ENST00000420162 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
CDRT15-201ENST00000420162 KCNQ4P56696 695 aa19.65■□□□□ 0.74
CDRT15-201ENST00000420162 E9PSI1 815 aa19.64■□□□□ 0.73
CDRT15-201ENST00000420162 ITPK1Q13572 414 aa19.64■□□□□ 0.73
CDRT15-201ENST00000420162 RREB1Q92766 1687 aa19.63■□□□□ 0.73
CDRT15-201ENST00000420162 GIGYF1O75420 1035 aaPredicted RBP19.63■□□□□ 0.73
CDRT15-201ENST00000420162 STARD3NLO95772 234 aa19.63■□□□□ 0.73
CDRT15-201ENST00000420162 NBPF14Q5TI25 921 aa19.63■□□□□ 0.73
CDRT15-201ENST00000420162 ZBED9Q6R2W3 1325 aa19.62■□□□□ 0.73
CDRT15-201ENST00000420162 DNAJC10Q8IXB1 793 aa19.62■□□□□ 0.73
CDRT15-201ENST00000420162 SLFN5Q08AF3 891 aa19.61■□□□□ 0.73
CDRT15-201ENST00000420162 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
CDRT15-201ENST00000420162 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
CDRT15-201ENST00000420162 TSR2Q969E8 191 aaKnown RBP19.61■□□□□ 0.73
CDRT15-201ENST00000420162 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
CDRT15-201ENST00000420162 CICQ96RK0 1608 aaPredicted RBP19.61■□□□□ 0.73
CDRT15-201ENST00000420162 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
CDRT15-201ENST00000420162 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
CDRT15-201ENST00000420162 HOXB7P09629 217 aa19.6■□□□□ 0.73
CDRT15-201ENST00000420162 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
CDRT15-201ENST00000420162 STK32BQ9NY57 414 aa19.6■□□□□ 0.73
CDRT15-201ENST00000420162 NUP188Q5SRE5 1749 aa19.59■□□□□ 0.73
CDRT15-201ENST00000420162 C5P01031 1676 aa19.59■□□□□ 0.73
CDRT15-201ENST00000420162 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
CDRT15-201ENST00000420162 CNTNAP4Q9C0A0 1308 aa19.59■□□□□ 0.73
CDRT15-201ENST00000420162 CHMP4AQ9BY43 222 aa19.59■□□□□ 0.73
CDRT15-201ENST00000420162 DUSP27Q5VZP5 1158 aa19.58■□□□□ 0.72
CDRT15-201ENST00000420162 AKT1S1Q96B36 256 aa19.58■□□□□ 0.72
CDRT15-201ENST00000420162 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
CDRT15-201ENST00000420162 TJP1Q07157 1748 aa19.58■□□□□ 0.72
CDRT15-201ENST00000420162 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
CDRT15-201ENST00000420162 SLC15A2Q16348 729 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms