RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
SHMT1P1-201ENST00000419974 KDM6AO15550 1401 aaPredicted RBP18.45■□□□□ 0.54
SHMT1P1-201ENST00000419974 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
SHMT1P1-201ENST00000419974 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
SHMT1P1-201ENST00000419974 TSR2Q969E8 191 aaKnown RBP18.45■□□□□ 0.54
SHMT1P1-201ENST00000419974 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
SHMT1P1-201ENST00000419974 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
SHMT1P1-201ENST00000419974 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
SHMT1P1-201ENST00000419974 USP35Q9P2H5 1018 aa18.44■□□□□ 0.54
SHMT1P1-201ENST00000419974 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
SHMT1P1-201ENST00000419974 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
SHMT1P1-201ENST00000419974 EXOC5O00471 708 aa18.43■□□□□ 0.54
SHMT1P1-201ENST00000419974 ALDH1L2Q3SY69 923 aa18.43■□□□□ 0.54
SHMT1P1-201ENST00000419974 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
SHMT1P1-201ENST00000419974 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
SHMT1P1-201ENST00000419974 RARSP54136 660 aaKnown RBP18.42■□□□□ 0.54
SHMT1P1-201ENST00000419974 TEFQ10587 303 aa18.42■□□□□ 0.54
SHMT1P1-201ENST00000419974 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
SHMT1P1-201ENST00000419974 CHMP4AQ9BY43 222 aa18.42■□□□□ 0.54
SHMT1P1-201ENST00000419974 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
SHMT1P1-201ENST00000419974 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
SHMT1P1-201ENST00000419974 VAMP4O75379 141 aa18.41■□□□□ 0.54
SHMT1P1-201ENST00000419974 HOXB7P09629 217 aa18.41■□□□□ 0.54
SHMT1P1-201ENST00000419974 BAG6P46379 1132 aa18.41■□□□□ 0.54
SHMT1P1-201ENST00000419974 DEFB132Q7Z7B7 95 aa18.41■□□□□ 0.54
SHMT1P1-201ENST00000419974 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
SHMT1P1-201ENST00000419974 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
SHMT1P1-201ENST00000419974 LAS1LQ9Y4W2 734 aaKnown RBP18.4■□□□□ 0.54
SHMT1P1-201ENST00000419974 FAM182BQ5T319 152 aa18.39■□□□□ 0.53
SHMT1P1-201ENST00000419974 BCL9O00512 1426 aa18.38■□□□□ 0.53
SHMT1P1-201ENST00000419974 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
SHMT1P1-201ENST00000419974 DDB1Q16531 1140 aa18.38■□□□□ 0.53
SHMT1P1-201ENST00000419974 TWISTNBQ3B726 338 aaPredicted RBP18.38■□□□□ 0.53
SHMT1P1-201ENST00000419974 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
SHMT1P1-201ENST00000419974 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
SHMT1P1-201ENST00000419974 SRCAPQ6ZRS2 3230 aa18.37■□□□□ 0.53
SHMT1P1-201ENST00000419974 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
SHMT1P1-201ENST00000419974 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
SHMT1P1-201ENST00000419974 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
SHMT1P1-201ENST00000419974 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
SHMT1P1-201ENST00000419974 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
SHMT1P1-201ENST00000419974 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
SHMT1P1-201ENST00000419974 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
SHMT1P1-201ENST00000419974 ARHGAP45Q92619 1136 aa18.34■□□□□ 0.53
SHMT1P1-201ENST00000419974 TRIM37O94972 964 aa18.33■□□□□ 0.53
SHMT1P1-201ENST00000419974 NEFLP07196 543 aa18.33■□□□□ 0.53
SHMT1P1-201ENST00000419974 CABP4P57796 275 aa18.33■□□□□ 0.53
SHMT1P1-201ENST00000419974 PDE3AQ14432 1141 aa18.33■□□□□ 0.53
SHMT1P1-201ENST00000419974 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.53
SHMT1P1-201ENST00000419974 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.52
SHMT1P1-201ENST00000419974 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
SHMT1P1-201ENST00000419974 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
SHMT1P1-201ENST00000419974 KIF16BQ96L93 1317 aa18.32■□□□□ 0.52
SHMT1P1-201ENST00000419974 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
SHMT1P1-201ENST00000419974 BCAR3O75815 825 aa18.31■□□□□ 0.52
SHMT1P1-201ENST00000419974 CAMKK2Q96RR4 588 aa18.31■□□□□ 0.52
SHMT1P1-201ENST00000419974 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
SHMT1P1-201ENST00000419974 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
SHMT1P1-201ENST00000419974 APBA3O96018 575 aa18.29■□□□□ 0.52
SHMT1P1-201ENST00000419974 MS4A1P11836 297 aa18.29■□□□□ 0.52
SHMT1P1-201ENST00000419974 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
SHMT1P1-201ENST00000419974 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
SHMT1P1-201ENST00000419974 IPO8O15397 1037 aaKnown RBP18.28■□□□□ 0.52
SHMT1P1-201ENST00000419974 CCDC30Q5VVM6 783 aa18.28■□□□□ 0.52
SHMT1P1-201ENST00000419974 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
SHMT1P1-201ENST00000419974 GTF3C3Q9Y5Q9 886 aa18.28■□□□□ 0.52
SHMT1P1-201ENST00000419974 TOGARAM1Q9Y4F4 1720 aa18.28■□□□□ 0.52
SHMT1P1-201ENST00000419974 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
SHMT1P1-201ENST00000419974 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.52
SHMT1P1-201ENST00000419974 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
SHMT1P1-201ENST00000419974 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.52
SHMT1P1-201ENST00000419974 KCNQ3O43525 872 aa18.26■□□□□ 0.51
SHMT1P1-201ENST00000419974 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
SHMT1P1-201ENST00000419974 AAMPQ13685 434 aa18.25■□□□□ 0.51
SHMT1P1-201ENST00000419974 ZKSCAN2Q63HK3 967 aa18.25■□□□□ 0.51
SHMT1P1-201ENST00000419974 TTC5Q8N0Z6 440 aa18.25■□□□□ 0.51
SHMT1P1-201ENST00000419974 PIGBQ92521 554 aa18.25■□□□□ 0.51
SHMT1P1-201ENST00000419974 PTPRCP08575 1304 aa18.25■□□□□ 0.51
SHMT1P1-201ENST00000419974 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
SHMT1P1-201ENST00000419974 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
SHMT1P1-201ENST00000419974 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
SHMT1P1-201ENST00000419974 ATF7IPQ6VMQ6 1270 aa18.24■□□□□ 0.51
SHMT1P1-201ENST00000419974 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
SHMT1P1-201ENST00000419974 PLSCR1O15162 318 aa18.23■□□□□ 0.51
SHMT1P1-201ENST00000419974 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
SHMT1P1-201ENST00000419974 BCL11BQ9C0K0 894 aaPredicted RBP18.23■□□□□ 0.51
SHMT1P1-201ENST00000419974 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
SHMT1P1-201ENST00000419974 FKBP8Q14318 412 aa18.23■□□□□ 0.51
SHMT1P1-201ENST00000419974 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
SHMT1P1-201ENST00000419974 SBF2Q86WG5 1849 aa18.22■□□□□ 0.51
SHMT1P1-201ENST00000419974 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
SHMT1P1-201ENST00000419974 HDGFL1Q5TGJ6 251 aa18.22■□□□□ 0.51
SHMT1P1-201ENST00000419974 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
SHMT1P1-201ENST00000419974 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
SHMT1P1-201ENST00000419974 PLIN1O60240 522 aa18.21■□□□□ 0.51
SHMT1P1-201ENST00000419974 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
SHMT1P1-201ENST00000419974 TRIM27P14373 513 aa18.21■□□□□ 0.51
SHMT1P1-201ENST00000419974 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
SHMT1P1-201ENST00000419974 API5Q9BZZ5 524 aaKnown RBP18.21■□□□□ 0.51
SHMT1P1-201ENST00000419974 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms