RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
CTSA-205ENST00000419493 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 LGR6Q9HBX8 967 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
CTSA-205ENST00000419493 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
CTSA-205ENST00000419493 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
CTSA-205ENST00000419493 RNMTO43148 476 aaKnown RBP12.92□□□□□ -0.34
CTSA-205ENST00000419493 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
CTSA-205ENST00000419493 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
CTSA-205ENST00000419493 ARXQ96QS3 562 aa12.92□□□□□ -0.34
CTSA-205ENST00000419493 GNPATO15228 680 aa12.91□□□□□ -0.34
CTSA-205ENST00000419493 ITPK1Q13572 414 aa12.91□□□□□ -0.34
CTSA-205ENST00000419493 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
CTSA-205ENST00000419493 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
CTSA-205ENST00000419493 FHDC1Q9C0D6 1143 aaPredicted RBP12.91□□□□□ -0.34
CTSA-205ENST00000419493 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
CTSA-205ENST00000419493 C5P01031 1676 aa12.91□□□□□ -0.34
CTSA-205ENST00000419493 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
CTSA-205ENST00000419493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
CTSA-205ENST00000419493 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
CTSA-205ENST00000419493 NEFMP07197 916 aa12.9□□□□□ -0.34
CTSA-205ENST00000419493 SMIM5Q71RC9 77 aa12.9□□□□□ -0.34
CTSA-205ENST00000419493 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
CTSA-205ENST00000419493 SYT17Q9BSW7 474 aa12.9□□□□□ -0.34
CTSA-205ENST00000419493 FCHSD2O94868 740 aa12.89□□□□□ -0.35
CTSA-205ENST00000419493 TEFQ10587 303 aa12.89□□□□□ -0.35
CTSA-205ENST00000419493 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 SSFA2P28290 1259 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 RALBP1Q15311 655 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
CTSA-205ENST00000419493 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
CTSA-205ENST00000419493 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
CTSA-205ENST00000419493 TRAPPC3LQ5T215 181 aa12.87□□□□□ -0.35
CTSA-205ENST00000419493 AMIGO3Q86WK7 504 aa12.87□□□□□ -0.35
CTSA-205ENST00000419493 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
CTSA-205ENST00000419493 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
CTSA-205ENST00000419493 TUBGCP6Q96RT7 1819 aa12.87□□□□□ -0.35
CTSA-205ENST00000419493 QSER1Q2KHR3 1735 aa12.87□□□□□ -0.35
CTSA-205ENST00000419493 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
CTSA-205ENST00000419493 RFC4P35249 363 aa12.85□□□□□ -0.35
CTSA-205ENST00000419493 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
CTSA-205ENST00000419493 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
CTSA-205ENST00000419493 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
CTSA-205ENST00000419493 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
CTSA-205ENST00000419493 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
CTSA-205ENST00000419493 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
CTSA-205ENST00000419493 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
CTSA-205ENST00000419493 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
CTSA-205ENST00000419493 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
CTSA-205ENST00000419493 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
CTSA-205ENST00000419493 ADRA2BP18089 450 aa12.82□□□□□ -0.36
CTSA-205ENST00000419493 GPR162Q16538 588 aa12.82□□□□□ -0.36
CTSA-205ENST00000419493 MCM10Q7L590 875 aa12.82□□□□□ -0.36
CTSA-205ENST00000419493 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
CTSA-205ENST00000419493 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
CTSA-205ENST00000419493 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
CTSA-205ENST00000419493 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
CTSA-205ENST00000419493 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
CTSA-205ENST00000419493 ZNF790Q6PG37 636 aa12.81□□□□□ -0.36
CTSA-205ENST00000419493 NLGN1Q8N2Q7 840 aa12.81□□□□□ -0.36
CTSA-205ENST00000419493 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
CTSA-205ENST00000419493 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
CTSA-205ENST00000419493 MRC1P22897 1456 aa12.79□□□□□ -0.36
CTSA-205ENST00000419493 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
CTSA-205ENST00000419493 ZPR1O75312 459 aa12.79□□□□□ -0.36
CTSA-205ENST00000419493 STARD3NLO95772 234 aa12.79□□□□□ -0.36
CTSA-205ENST00000419493 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
CTSA-205ENST00000419493 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
CTSA-205ENST00000419493 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
CTSA-205ENST00000419493 NLGN2Q8NFZ4 835 aa12.79□□□□□ -0.36
CTSA-205ENST00000419493 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
CTSA-205ENST00000419493 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
CTSA-205ENST00000419493 TEX13AQ9BXU3 409 aaPredicted RBP12.79□□□□□ -0.36
CTSA-205ENST00000419493 ZNF831Q5JPB2 1677 aa12.79□□□□□ -0.36
CTSA-205ENST00000419493 MMP10P09238 476 aa12.78□□□□□ -0.36
CTSA-205ENST00000419493 YY1P25490 414 aa12.78□□□□□ -0.36
CTSA-205ENST00000419493 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTSA-205ENST00000419493 NPM2Q86SE8 214 aaKnown RBP12.78□□□□□ -0.36
CTSA-205ENST00000419493 ZNF330Q9Y3S2 320 aaPredicted RBP12.78□□□□□ -0.36
CTSA-205ENST00000419493 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
CTSA-205ENST00000419493 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
CTSA-205ENST00000419493 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.36
CTSA-205ENST00000419493 KCNQ3O43525 872 aa12.77□□□□□ -0.37
CTSA-205ENST00000419493 GYS1P13807 737 aa12.77□□□□□ -0.37
CTSA-205ENST00000419493 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
CTSA-205ENST00000419493 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.37
CTSA-205ENST00000419493 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
CTSA-205ENST00000419493 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
CTSA-205ENST00000419493 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.37
CTSA-205ENST00000419493 PARP3Q9Y6F1 533 aa12.77□□□□□ -0.37
CTSA-205ENST00000419493 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
CTSA-205ENST00000419493 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
CTSA-205ENST00000419493 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
CTSA-205ENST00000419493 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms