RNA–Protein interactions for RNA: ENST00000419490.5

HP1BP3-206, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

TSL 4

Gene HP1BP3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-206ENST00000419490 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
HP1BP3-206ENST00000419490 PDGFDQ9GZP0 370 aaPredicted RBP25.42■■□□□ 1.66
HP1BP3-206ENST00000419490 MAP3K5Q99683 1374 aa25.42■■□□□ 1.66
HP1BP3-206ENST00000419490 MRC1P22897 1456 aa25.41■■□□□ 1.66
HP1BP3-206ENST00000419490 QSER1Q2KHR3 1735 aa25.41■■□□□ 1.66
HP1BP3-206ENST00000419490 LOC102724428A0A0B4J2F2 783 aa25.41■■□□□ 1.66
HP1BP3-206ENST00000419490 SIK1P57059 783 aa25.41■■□□□ 1.66
HP1BP3-206ENST00000419490 SLC52A2Q9HAB3 445 aa25.4■■□□□ 1.66
HP1BP3-206ENST00000419490 GNAT3A8MTJ3 354 aa25.39■■□□□ 1.66
HP1BP3-206ENST00000419490 C4BP0C0L5 1744 aa25.37■■□□□ 1.65
HP1BP3-206ENST00000419490 TFCP2L1Q9NZI6 479 aa25.37■■□□□ 1.65
HP1BP3-206ENST00000419490 HMGB2P26583 209 aaKnown RBP25.36■■□□□ 1.65
HP1BP3-206ENST00000419490 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
HP1BP3-206ENST00000419490 ATP6V1AP38606 617 aa25.35■■□□□ 1.65
HP1BP3-206ENST00000419490 RBM42Q9BTD8 480 aaKnown RBP25.35■■□□□ 1.65
HP1BP3-206ENST00000419490 PNPLA7Q6ZV29 1317 aa25.35■■□□□ 1.65
HP1BP3-206ENST00000419490 ZBTB7AO95365 584 aa25.34■■□□□ 1.65
HP1BP3-206ENST00000419490 ITPK1Q13572 414 aa25.34■■□□□ 1.65
HP1BP3-206ENST00000419490 IL17REQ8NFR9 667 aa25.34■■□□□ 1.65
HP1BP3-206ENST00000419490 SPON1Q9HCB6 807 aa25.34■■□□□ 1.65
HP1BP3-206ENST00000419490 LINC00116Q8NCU8 138 aa25.33■■□□□ 1.65
HP1BP3-206ENST00000419490 SLC4A9Q96Q91 983 aa25.33■■□□□ 1.65
HP1BP3-206ENST00000419490 SIPA1L3O60292 1781 aaPredicted RBP25.32■■□□□ 1.64
HP1BP3-206ENST00000419490 NEFMP07197 916 aa25.32■■□□□ 1.64
HP1BP3-206ENST00000419490 PLEKHF1Q96S99 279 aa25.32■■□□□ 1.64
HP1BP3-206ENST00000419490 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
HP1BP3-206ENST00000419490 DLG5Q8TDM6 1919 aa25.31■■□□□ 1.64
HP1BP3-206ENST00000419490 CEMIPQ8WUJ3 1361 aa25.31■■□□□ 1.64
HP1BP3-206ENST00000419490 UBR3Q6ZT12 1888 aa25.3■■□□□ 1.64
HP1BP3-206ENST00000419490 COL5A3P25940 1745 aaPredicted RBP25.3■■□□□ 1.64
HP1BP3-206ENST00000419490 TEFQ10587 303 aa25.3■■□□□ 1.64
HP1BP3-206ENST00000419490 AK7Q96M32 723 aa25.3■■□□□ 1.64
HP1BP3-206ENST00000419490 PNNQ9H307 717 aaKnown RBP25.3■■□□□ 1.64
HP1BP3-206ENST00000419490 SLC39A6Q13433 755 aa25.29■■□□□ 1.64
HP1BP3-206ENST00000419490 MTFR1LQ9H019 292 aa25.29■■□□□ 1.64
HP1BP3-206ENST00000419490 ATF5Q9Y2D1 282 aaPredicted RBP25.29■■□□□ 1.64
HP1BP3-206ENST00000419490 CICQ96RK0 1608 aaPredicted RBP25.27■■□□□ 1.64
HP1BP3-206ENST00000419490 TJP1Q07157 1748 aa25.27■■□□□ 1.64
HP1BP3-206ENST00000419490 RTF1Q92541 710 aaKnown RBP25.27■■□□□ 1.64
HP1BP3-206ENST00000419490 MAPK8IP3Q9UPT6 1336 aa25.27■■□□□ 1.64
HP1BP3-206ENST00000419490 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
HP1BP3-206ENST00000419490 UBR2Q8IWV8 1755 aa25.26■■□□□ 1.63
HP1BP3-206ENST00000419490 MCM10Q7L590 875 aa25.26■■□□□ 1.63
HP1BP3-206ENST00000419490 COL23A1Q86Y22 540 aaPredicted RBP25.26■■□□□ 1.63
HP1BP3-206ENST00000419490 SLC16A10Q8TF71 515 aa25.26■■□□□ 1.63
HP1BP3-206ENST00000419490 WDR43Q15061 677 aaKnown RBP eCLIP25.25■■□□□ 1.63
HP1BP3-206ENST00000419490 AMIGO3Q86WK7 504 aa25.25■■□□□ 1.63
HP1BP3-206ENST00000419490 MSH5O43196 834 aa25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 HTATSF1O43719 755 aaKnown RBP25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 PTGER2P43116 358 aa25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 DCTN1Q14203 1278 aa25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 NFE2L2Q16236 605 aa25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 FLAD1Q8NFF5 587 aa25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 MYH14Q7Z406 1995 aaKnown RBP25.24■■□□□ 1.63
HP1BP3-206ENST00000419490 GNPATO15228 680 aa25.23■■□□□ 1.63
HP1BP3-206ENST00000419490 CNTNAP4Q9C0A0 1308 aa25.22■■□□□ 1.63
HP1BP3-206ENST00000419490 PHF14O94880 888 aa25.22■■□□□ 1.63
HP1BP3-206ENST00000419490 SMIM5Q71RC9 77 aa25.22■■□□□ 1.63
HP1BP3-206ENST00000419490 TTC5Q8N0Z6 440 aa25.22■■□□□ 1.63
HP1BP3-206ENST00000419490 PPP1R1BQ9UD71 204 aaPredicted RBP25.22■■□□□ 1.63
HP1BP3-206ENST00000419490 COL24A1Q17RW2 1714 aa25.21■■□□□ 1.63
HP1BP3-206ENST00000419490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.21■■□□□ 1.63
HP1BP3-206ENST00000419490 ANP32CO43423 234 aa25.21■■□□□ 1.63
HP1BP3-206ENST00000419490 SSFA2P28290 1259 aa25.21■■□□□ 1.63
HP1BP3-206ENST00000419490 SGIP1Q9BQI5 828 aa25.21■■□□□ 1.63
HP1BP3-206ENST00000419490 RC3H1Q5TC82 1133 aaKnown RBP25.2■■□□□ 1.62
HP1BP3-206ENST00000419490 ZNF790Q6PG37 636 aa25.2■■□□□ 1.62
HP1BP3-206ENST00000419490 ADAMTS8Q9UP79 889 aa25.2■■□□□ 1.62
HP1BP3-206ENST00000419490 BTBD11A6QL63 1104 aa25.19■■□□□ 1.62
HP1BP3-206ENST00000419490 DNAJC10Q8IXB1 793 aa25.19■■□□□ 1.62
HP1BP3-206ENST00000419490 CCDC146Q8IYE0 955 aa25.19■■□□□ 1.62
HP1BP3-206ENST00000419490 RTCBQ9Y3I0 505 aaKnown RBP25.18■■□□□ 1.62
HP1BP3-206ENST00000419490 CRKLP46109 303 aaKnown RBP25.17■■□□□ 1.62
HP1BP3-206ENST00000419490 CCDC184Q52MB2 194 aa25.17■■□□□ 1.62
HP1BP3-206ENST00000419490 ZNF496Q96IT1 587 aaPredicted RBP25.17■■□□□ 1.62
HP1BP3-206ENST00000419490 VSIG10Q8N0Z9 540 aa25.16■■□□□ 1.62
HP1BP3-206ENST00000419490 RUNDC1Q96C34 613 aa25.16■■□□□ 1.62
HP1BP3-206ENST00000419490 KCNQ3O43525 872 aa25.15■■□□□ 1.62
HP1BP3-206ENST00000419490 RPS6KA4O75676 772 aa25.15■■□□□ 1.62
HP1BP3-206ENST00000419490 TMPOP42166 694 aaKnown RBP25.15■■□□□ 1.62
HP1BP3-206ENST00000419490 HEG1Q9ULI3 1381 aa25.15■■□□□ 1.62
HP1BP3-206ENST00000419490 POLD1P28340 1107 aa25.14■■□□□ 1.62
HP1BP3-206ENST00000419490 RIPK4P57078 832 aa25.14■■□□□ 1.62
HP1BP3-206ENST00000419490 MSL1Q68DK7 614 aa25.14■■□□□ 1.62
HP1BP3-206ENST00000419490 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.62
HP1BP3-206ENST00000419490 CYP19A1P11511 503 aaPredicted RBP25.13■■□□□ 1.61
HP1BP3-206ENST00000419490 TAF7Q15545 349 aaPredicted RBP25.13■■□□□ 1.61
HP1BP3-206ENST00000419490 FMNL2Q96PY5 1086 aa25.13■■□□□ 1.61
HP1BP3-206ENST00000419490 TRAPPC3LQ5T215 181 aa25.12■■□□□ 1.61
HP1BP3-206ENST00000419490 INTS5Q6P9B9 1019 aaKnown RBP25.12■■□□□ 1.61
HP1BP3-206ENST00000419490 ARXQ96QS3 562 aa25.12■■□□□ 1.61
HP1BP3-206ENST00000419490 CCDC87Q9NVE4 849 aa25.12■■□□□ 1.61
HP1BP3-206ENST00000419490 RRP7AQ9Y3A4 280 aaKnown RBP25.12■■□□□ 1.61
HP1BP3-206ENST00000419490 C4AP0C0L4 1744 aa25.12■■□□□ 1.61
HP1BP3-206ENST00000419490 ADRA2BP18089 450 aa25.11■■□□□ 1.61
HP1BP3-206ENST00000419490 ARHGEF1Q92888 912 aaKnown RBP25.1■■□□□ 1.61
HP1BP3-206ENST00000419490 KDM3BQ7LBC6 1761 aa25.1■■□□□ 1.61
HP1BP3-206ENST00000419490 LMOD3Q0VAK6 560 aa25.09■■□□□ 1.61
HP1BP3-206ENST00000419490 NEUROD2Q15784 382 aa25.09■■□□□ 1.61
HP1BP3-206ENST00000419490 MIS18AQ9NYP9 233 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms