RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 PIGBQ92521 554 aa15.81■□□□□ 0.12
THUMPD3-204ENST00000419437 NPC1L1Q9UHC9 1359 aa15.81■□□□□ 0.12
THUMPD3-204ENST00000419437 HMOX1P09601 288 aa15.8■□□□□ 0.12
THUMPD3-204ENST00000419437 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
THUMPD3-204ENST00000419437 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
THUMPD3-204ENST00000419437 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
THUMPD3-204ENST00000419437 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
THUMPD3-204ENST00000419437 TMOD3Q9NYL9 352 aa15.79■□□□□ 0.12
THUMPD3-204ENST00000419437 AK7Q96M32 723 aa15.78■□□□□ 0.12
THUMPD3-204ENST00000419437 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
THUMPD3-204ENST00000419437 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
THUMPD3-204ENST00000419437 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
THUMPD3-204ENST00000419437 HSP90AB1P08238 724 aaKnown RBP15.76■□□□□ 0.11
THUMPD3-204ENST00000419437 SSFA2P28290 1259 aa15.76■□□□□ 0.11
THUMPD3-204ENST00000419437 DCAF5Q96JK2 942 aa15.76■□□□□ 0.11
THUMPD3-204ENST00000419437 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
THUMPD3-204ENST00000419437 ATP10DQ9P241 1426 aa15.76■□□□□ 0.11
THUMPD3-204ENST00000419437 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
THUMPD3-204ENST00000419437 SIK1P57059 783 aa15.75■□□□□ 0.11
THUMPD3-204ENST00000419437 ADCY9O60503 1353 aa15.75■□□□□ 0.11
THUMPD3-204ENST00000419437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 ERVV-2B6SEH9 535 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 PPP2R1AP30153 589 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 CABP4P57796 275 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 ATG3Q9NT62 314 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 KDRP35968 1356 aa15.74■□□□□ 0.11
THUMPD3-204ENST00000419437 KIF13BQ9NQT8 1826 aa15.73■□□□□ 0.11
THUMPD3-204ENST00000419437 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
THUMPD3-204ENST00000419437 PHF14O94880 888 aa15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 MTHFSDQ2M296 383 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 CICQ96RK0 1608 aaPredicted RBP15.71■□□□□ 0.11
THUMPD3-204ENST00000419437 ATP6V1AP38606 617 aa15.7■□□□□ 0.1
THUMPD3-204ENST00000419437 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
THUMPD3-204ENST00000419437 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
THUMPD3-204ENST00000419437 GNPATO15228 680 aa15.68■□□□□ 0.1
THUMPD3-204ENST00000419437 ITPK1Q13572 414 aa15.68■□□□□ 0.1
THUMPD3-204ENST00000419437 SMIM5Q71RC9 77 aa15.68■□□□□ 0.1
THUMPD3-204ENST00000419437 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
THUMPD3-204ENST00000419437 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
THUMPD3-204ENST00000419437 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
THUMPD3-204ENST00000419437 U2AF1L5P0DN76 240 aaPredicted RBP15.67■□□□□ 0.1
THUMPD3-204ENST00000419437 U2AF1Q01081 240 aaKnown RBP eCLIP15.67■□□□□ 0.1
THUMPD3-204ENST00000419437 KIAA1551Q9HCM1 1747 aa15.67■□□□□ 0.1
THUMPD3-204ENST00000419437 COL3A1P02461 1466 aaPredicted RBP15.66■□□□□ 0.1
THUMPD3-204ENST00000419437 SLC4A9Q96Q91 983 aa15.66■□□□□ 0.1
THUMPD3-204ENST00000419437 ADRA2BP18089 450 aa15.65■□□□□ 0.1
THUMPD3-204ENST00000419437 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
THUMPD3-204ENST00000419437 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
THUMPD3-204ENST00000419437 PHACTR3Q96KR7 559 aa15.65■□□□□ 0.1
THUMPD3-204ENST00000419437 SLC52A2Q9HAB3 445 aa15.65■□□□□ 0.1
THUMPD3-204ENST00000419437 RTCBQ9Y3I0 505 aaKnown RBP15.65■□□□□ 0.1
THUMPD3-204ENST00000419437 MMP10P09238 476 aa15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 TGFB2P61812 414 aa15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 TRAPPC3LQ5T215 181 aa15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 N4BP2Q86UW6 1770 aaPredicted RBP15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
THUMPD3-204ENST00000419437 BRCA1P38398 1863 aaKnown RBP15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 C10orf71Q711Q0 1435 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 HSPA6P17066 643 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 SLC39A6Q13433 755 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 RSPH6AQ9H0K4 717 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 CNTNAP4Q9C0A0 1308 aa15.63■□□□□ 0.09
THUMPD3-204ENST00000419437 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
THUMPD3-204ENST00000419437 FCHSD2O94868 740 aa15.62■□□□□ 0.09
THUMPD3-204ENST00000419437 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
THUMPD3-204ENST00000419437 IL17REQ8NFR9 667 aa15.62■□□□□ 0.09
THUMPD3-204ENST00000419437 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
THUMPD3-204ENST00000419437 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
THUMPD3-204ENST00000419437 ARFGEF1Q9Y6D6 1849 aa15.6■□□□□ 0.09
THUMPD3-204ENST00000419437 RALBP1Q15311 655 aa15.6■□□□□ 0.09
THUMPD3-204ENST00000419437 PCNTO95613 3336 aa15.6■□□□□ 0.09
THUMPD3-204ENST00000419437 RPS6KA4O75676 772 aa15.59■□□□□ 0.09
THUMPD3-204ENST00000419437 TEFQ10587 303 aa15.59■□□□□ 0.09
THUMPD3-204ENST00000419437 ARHGEF1Q92888 912 aaKnown RBP15.59■□□□□ 0.09
THUMPD3-204ENST00000419437 WWC3Q9ULE0 1092 aa15.59■□□□□ 0.09
THUMPD3-204ENST00000419437 SCN11AQ9UI33 1791 aa15.58■□□□□ 0.08
THUMPD3-204ENST00000419437 KIF3CO14782 793 aa15.58■□□□□ 0.08
THUMPD3-204ENST00000419437 GYS1P13807 737 aa15.58■□□□□ 0.08
THUMPD3-204ENST00000419437 RFC4P35249 363 aa15.58■□□□□ 0.08
THUMPD3-204ENST00000419437 CCDC87Q9NVE4 849 aa15.58■□□□□ 0.08
THUMPD3-204ENST00000419437 DNAJC10Q8IXB1 793 aa15.57■□□□□ 0.08
THUMPD3-204ENST00000419437 TJP1Q07157 1748 aa15.57■□□□□ 0.08
THUMPD3-204ENST00000419437 A0A0G2JLW4 131 aa15.56■□□□□ 0.08
THUMPD3-204ENST00000419437 CRKLP46109 303 aaKnown RBP15.56■□□□□ 0.08
THUMPD3-204ENST00000419437 RTF1Q92541 710 aaKnown RBP15.56■□□□□ 0.08
THUMPD3-204ENST00000419437 BCS1LQ9Y276 419 aa15.56■□□□□ 0.08
THUMPD3-204ENST00000419437 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
THUMPD3-204ENST00000419437 NEFMP07197 916 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms