RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 LMOD2Q6P5Q4 547 aa25.85■■□□□ 1.73
FAM3A-208ENST00000419205 HOXB7P09629 217 aa25.84■■□□□ 1.73
FAM3A-208ENST00000419205 ZNF530Q6P9A1 599 aaPredicted RBP25.84■■□□□ 1.73
FAM3A-208ENST00000419205 SLC4A10Q6U841 1118 aa25.84■■□□□ 1.73
FAM3A-208ENST00000419205 LGR6Q9HBX8 967 aa25.83■■□□□ 1.73
FAM3A-208ENST00000419205 ADAMTS7Q9UKP4 1686 aa25.82■■□□□ 1.72
FAM3A-208ENST00000419205 FKBP5Q13451 457 aaPredicted RBP25.82■■□□□ 1.72
FAM3A-208ENST00000419205 CHMP4AQ9BY43 222 aa25.82■■□□□ 1.72
FAM3A-208ENST00000419205 PXDNQ92626 1479 aa25.82■■□□□ 1.72
FAM3A-208ENST00000419205 HMMRO75330 724 aa25.82■■□□□ 1.72
FAM3A-208ENST00000419205 EIF4A1P60842 406 aaKnown RBP25.82■■□□□ 1.72
FAM3A-208ENST00000419205 HDGFL1Q5TGJ6 251 aa25.81■■□□□ 1.72
FAM3A-208ENST00000419205 SIPA1L3O60292 1781 aaPredicted RBP25.8■■□□□ 1.72
FAM3A-208ENST00000419205 PLEKHM2Q8IWE5 1019 aa25.8■■□□□ 1.72
FAM3A-208ENST00000419205 AXIN2Q9Y2T1 843 aa25.8■■□□□ 1.72
FAM3A-208ENST00000419205 CRYBG1Q9Y4K1 1723 aa25.79■■□□□ 1.72
FAM3A-208ENST00000419205 ABCC6O95255 1503 aa25.79■■□□□ 1.72
FAM3A-208ENST00000419205 GNAI2P04899 355 aa25.79■■□□□ 1.72
FAM3A-208ENST00000419205 GNAI3P08754 354 aa25.79■■□□□ 1.72
FAM3A-208ENST00000419205 TEFQ10587 303 aa25.79■■□□□ 1.72
FAM3A-208ENST00000419205 COL18A1P39060 1754 aa25.78■■□□□ 1.72
FAM3A-208ENST00000419205 ERBB3P21860 1342 aa25.78■■□□□ 1.72
FAM3A-208ENST00000419205 RNMTO43148 476 aaKnown RBP25.78■■□□□ 1.72
FAM3A-208ENST00000419205 RBM25P49756 843 aaKnown RBP25.78■■□□□ 1.72
FAM3A-208ENST00000419205 C1orf141Q5JVX7 400 aa25.78■■□□□ 1.72
FAM3A-208ENST00000419205 CADPS2Q86UW7 1296 aa25.78■■□□□ 1.72
FAM3A-208ENST00000419205 NECTIN2Q92692 538 aa25.78■■□□□ 1.72
FAM3A-208ENST00000419205 TBC1D2Q9BYX2 928 aa25.77■■□□□ 1.72
FAM3A-208ENST00000419205 NPHP3Q7Z494 1330 aa25.75■■□□□ 1.71
FAM3A-208ENST00000419205 XIRP1Q702N8 1843 aaKnown RBP25.75■■□□□ 1.71
FAM3A-208ENST00000419205 TNS3Q68CZ2 1445 aa25.75■■□□□ 1.71
FAM3A-208ENST00000419205 BTBD11A6QL63 1104 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 PLEKHG5O94827 1062 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 TTC22Q5TAA0 569 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 MPRIPQ6WCQ1 1025 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 EIF5BO60841 1220 aaKnown RBP25.74■■□□□ 1.71
FAM3A-208ENST00000419205 CDC45O75419 566 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 GSPT1P15170 499 aaKnown RBP25.74■■□□□ 1.71
FAM3A-208ENST00000419205 NFKBIBQ15653 356 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 TBC1D9Q6ZT07 1266 aa25.74■■□□□ 1.71
FAM3A-208ENST00000419205 PLEKHG2Q9H7P9 1386 aa25.73■■□□□ 1.71
FAM3A-208ENST00000419205 ZC3H6P61129 1189 aaKnown RBP25.72■■□□□ 1.71
FAM3A-208ENST00000419205 HEG1Q9ULI3 1381 aa25.71■■□□□ 1.71
FAM3A-208ENST00000419205 KCNQ3O43525 872 aa25.7■■□□□ 1.7
FAM3A-208ENST00000419205 C16orf71Q8IYS4 520 aaPredicted RBP25.7■■□□□ 1.7
FAM3A-208ENST00000419205 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
FAM3A-208ENST00000419205 SCN11AQ9UI33 1791 aa25.7■■□□□ 1.7
FAM3A-208ENST00000419205 DEKP35659 375 aaKnown RBP25.69■■□□□ 1.7
FAM3A-208ENST00000419205 ATP8B2P98198 1209 aa25.69■■□□□ 1.7
FAM3A-208ENST00000419205 EIF2S2P20042 333 aaKnown RBP25.68■■□□□ 1.7
FAM3A-208ENST00000419205 DDX17Q92841 729 aaKnown RBP25.68■■□□□ 1.7
FAM3A-208ENST00000419205 USP44Q9H0E7 712 aa25.68■■□□□ 1.7
FAM3A-208ENST00000419205 ANTXR1Q9H6X2 564 aa25.68■■□□□ 1.7
FAM3A-208ENST00000419205 CHPF2Q9P2E5 772 aa25.68■■□□□ 1.7
FAM3A-208ENST00000419205 SMARCA5O60264 1052 aaPredicted RBP25.67■■□□□ 1.7
FAM3A-208ENST00000419205 OTUD7AQ8TE49 926 aaPredicted RBP25.67■■□□□ 1.7
FAM3A-208ENST00000419205 OSBPL3Q9H4L5 887 aa25.67■■□□□ 1.7
FAM3A-208ENST00000419205 SPATA31A3Q5VYP0 1347 aa25.66■■□□□ 1.7
FAM3A-208ENST00000419205 HSPA2P54652 639 aa25.66■■□□□ 1.7
FAM3A-208ENST00000419205 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
FAM3A-208ENST00000419205 RAPGEF4Q8WZA2 1011 aa25.65■■□□□ 1.7
FAM3A-208ENST00000419205 SRCIN1Q9C0H9 1055 aa25.65■■□□□ 1.7
FAM3A-208ENST00000419205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.65■■□□□ 1.7
FAM3A-208ENST00000419205 CPDO75976 1380 aa25.65■■□□□ 1.7
FAM3A-208ENST00000419205 UBTFL1P0CB47 393 aaPredicted RBP25.64■■□□□ 1.7
FAM3A-208ENST00000419205 STRCQ7RTU9 1775 aa25.64■■□□□ 1.7
FAM3A-208ENST00000419205 SNX21Q969T3 373 aa25.64■■□□□ 1.7
FAM3A-208ENST00000419205 DBF4Q9UBU7 674 aaPredicted RBP25.64■■□□□ 1.7
FAM3A-208ENST00000419205 LRRFIP2Q9Y608 721 aaKnown RBP25.64■■□□□ 1.7
FAM3A-208ENST00000419205 GIGYF1O75420 1035 aaPredicted RBP25.64■■□□□ 1.69
FAM3A-208ENST00000419205 PKD1L3Q7Z443 1732 aa25.63■■□□□ 1.69
FAM3A-208ENST00000419205 IBTKQ9P2D0 1353 aaPredicted RBP25.63■■□□□ 1.69
FAM3A-208ENST00000419205 APBB1O00213 710 aa25.63■■□□□ 1.69
FAM3A-208ENST00000419205 NLRP2Q9NX02 1062 aa25.63■■□□□ 1.69
FAM3A-208ENST00000419205 TUBGCP6Q96RT7 1819 aa25.63■■□□□ 1.69
FAM3A-208ENST00000419205 PNMA6EA0A0J9YXQ4 647 aa25.62■■□□□ 1.69
FAM3A-208ENST00000419205 TATP17735 454 aaPredicted RBP25.62■■□□□ 1.69
FAM3A-208ENST00000419205 DNAAF4Q8WXU2 420 aa25.62■■□□□ 1.69
FAM3A-208ENST00000419205 MEGF6O75095 1541 aa25.62■■□□□ 1.69
FAM3A-208ENST00000419205 HSCBQ8IWL3 235 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 ADCY9O60503 1353 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 BEND3Q5T5X7 828 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 KIF2CQ99661 725 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 LRRCC1Q9C099 1032 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 SLKQ9H2G2 1235 aaPredicted RBP25.61■■□□□ 1.69
FAM3A-208ENST00000419205 SPG7Q9UQ90 795 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 EXOC6BQ9Y2D4 811 aa25.61■■□□□ 1.69
FAM3A-208ENST00000419205 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
FAM3A-208ENST00000419205 SALL3Q9BXA9 1300 aa25.6■■□□□ 1.69
FAM3A-208ENST00000419205 SDSP20132 328 aa25.6■■□□□ 1.69
FAM3A-208ENST00000419205 PI4KAP2A4QPH2 592 aa25.59■■□□□ 1.69
FAM3A-208ENST00000419205 PI4KAP1Q8N8J0 262 aa25.59■■□□□ 1.69
FAM3A-208ENST00000419205 SSH3Q8TE77 659 aa25.59■■□□□ 1.69
FAM3A-208ENST00000419205 MRC1P22897 1456 aa25.59■■□□□ 1.69
FAM3A-208ENST00000419205 PDE1AP54750 535 aa25.59■■□□□ 1.69
FAM3A-208ENST00000419205 PHKG2P15735 406 aa25.58■■□□□ 1.69
FAM3A-208ENST00000419205 CABLES1Q8TDN4 633 aa25.58■■□□□ 1.69
FAM3A-208ENST00000419205 CASC1Q6TDU7 716 aa25.57■■□□□ 1.68
FAM3A-208ENST00000419205 BRINP3Q76B58 766 aa25.57■■□□□ 1.68
FAM3A-208ENST00000419205 FRAT2O75474 233 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms