RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
SYNC-203ENST00000417633 TRMT2AQ8IZ69 625 aaKnown RBP15.09■□□□□ 0.01
SYNC-203ENST00000417633 NFATC2IPQ8NCF5 419 aa15.09■□□□□ 0.01
SYNC-203ENST00000417633 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
SYNC-203ENST00000417633 ITGB4P16144 1822 aa15.08■□□□□ 0.01
SYNC-203ENST00000417633 E9PSI1 815 aa15.08■□□□□ 0
SYNC-203ENST00000417633 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
SYNC-203ENST00000417633 FAM182BQ5T319 152 aa15.07■□□□□ 0
SYNC-203ENST00000417633 PIGBQ92521 554 aa15.07■□□□□ 0
SYNC-203ENST00000417633 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
SYNC-203ENST00000417633 TMOD3Q9NYL9 352 aa15.07■□□□□ 0
SYNC-203ENST00000417633 SBF2Q86WG5 1849 aa15.06■□□□□ 0
SYNC-203ENST00000417633 BTBD11A6QL63 1104 aa15.06■□□□□ 0
SYNC-203ENST00000417633 ACSBG1Q96GR2 724 aa15.06■□□□□ 0
SYNC-203ENST00000417633 MYH16Q9H6N6 1097 aa15.06■□□□□ 0
SYNC-203ENST00000417633 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
SYNC-203ENST00000417633 MBIPQ9NS73 344 aa15.05■□□□□ -0
SYNC-203ENST00000417633 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
SYNC-203ENST00000417633 KCNQ2O43526 872 aa15.04■□□□□ -0
SYNC-203ENST00000417633 DUSP27Q5VZP5 1158 aa15.04■□□□□ -0
SYNC-203ENST00000417633 BCL11BQ9C0K0 894 aaPredicted RBP15.04■□□□□ -0
SYNC-203ENST00000417633 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
SYNC-203ENST00000417633 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
SYNC-203ENST00000417633 ZNF790Q6PG37 636 aa15.03■□□□□ -0
SYNC-203ENST00000417633 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
SYNC-203ENST00000417633 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
SYNC-203ENST00000417633 NHSQ6T4R5 1651 aa15.03■□□□□ -0
SYNC-203ENST00000417633 FANCIQ9NVI1 1328 aa15.02■□□□□ -0
SYNC-203ENST00000417633 SLC39A6Q13433 755 aa15.02■□□□□ -0
SYNC-203ENST00000417633 TSR2Q969E8 191 aaKnown RBP15.02■□□□□ -0
SYNC-203ENST00000417633 ATG3Q9NT62 314 aa15.02■□□□□ -0
SYNC-203ENST00000417633 KCNQ3O43525 872 aa15.01□□□□□ -0.01
SYNC-203ENST00000417633 EIF4A1P60842 406 aaKnown RBP15.01□□□□□ -0.01
SYNC-203ENST00000417633 HEG1Q9ULI3 1381 aa15□□□□□ -0.01
SYNC-203ENST00000417633 PAPPAQ13219 1627 aa15□□□□□ -0.01
SYNC-203ENST00000417633 PTF1AQ7RTS3 328 aa15□□□□□ -0.01
SYNC-203ENST00000417633 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
SYNC-203ENST00000417633 SMARCC1Q92922 1105 aaPredicted RBP15□□□□□ -0.01
SYNC-203ENST00000417633 ASAP1Q9ULH1 1129 aa15□□□□□ -0.01
SYNC-203ENST00000417633 TRIM37O94972 964 aa14.99□□□□□ -0.01
SYNC-203ENST00000417633 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
SYNC-203ENST00000417633 FMNL2Q96PY5 1086 aa14.98□□□□□ -0.01
SYNC-203ENST00000417633 BTAF1O14981 1849 aa14.98□□□□□ -0.01
SYNC-203ENST00000417633 UBR2Q8IWV8 1755 aa14.98□□□□□ -0.01
SYNC-203ENST00000417633 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
SYNC-203ENST00000417633 HOXB7P09629 217 aa14.97□□□□□ -0.01
SYNC-203ENST00000417633 CT47B1P0C2W7 299 aaPredicted RBP14.97□□□□□ -0.01
SYNC-203ENST00000417633 VSIG10Q8N0Z9 540 aa14.97□□□□□ -0.01
SYNC-203ENST00000417633 C8orf58Q8NAV2 365 aa14.97□□□□□ -0.01
SYNC-203ENST00000417633 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
SYNC-203ENST00000417633 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
SYNC-203ENST00000417633 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
SYNC-203ENST00000417633 PALLDQ8WX93 1383 aa14.96□□□□□ -0.02
SYNC-203ENST00000417633 VAMP4O75379 141 aa14.95□□□□□ -0.02
SYNC-203ENST00000417633 SNRPA1P09661 255 aaKnown RBP14.95□□□□□ -0.02
SYNC-203ENST00000417633 KRT24Q2M2I5 525 aa14.95□□□□□ -0.02
SYNC-203ENST00000417633 ILDR2Q71H61 639 aa14.95□□□□□ -0.02
SYNC-203ENST00000417633 TSPYL6Q8N831 410 aa14.95□□□□□ -0.02
SYNC-203ENST00000417633 PLSCR1O15162 318 aa14.94□□□□□ -0.02
SYNC-203ENST00000417633 PTCD1O75127 700 aaKnown RBP14.94□□□□□ -0.02
SYNC-203ENST00000417633 TWISTNBQ3B726 338 aaPredicted RBP14.94□□□□□ -0.02
SYNC-203ENST00000417633 ZNF428Q96B54 188 aa14.94□□□□□ -0.02
SYNC-203ENST00000417633 SLC4A9Q96Q91 983 aa14.94□□□□□ -0.02
SYNC-203ENST00000417633 TEX13AQ9BXU3 409 aaPredicted RBP14.94□□□□□ -0.02
SYNC-203ENST00000417633 LOC102724428A0A0B4J2F2 783 aa14.93□□□□□ -0.02
SYNC-203ENST00000417633 SIK1P57059 783 aa14.93□□□□□ -0.02
SYNC-203ENST00000417633 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
SYNC-203ENST00000417633 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
SYNC-203ENST00000417633 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
SYNC-203ENST00000417633 LY75O60449 1722 aa14.92□□□□□ -0.02
SYNC-203ENST00000417633 ELL2O00472 640 aaPredicted RBP14.92□□□□□ -0.02
SYNC-203ENST00000417633 APBA3O96018 575 aa14.92□□□□□ -0.02
SYNC-203ENST00000417633 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
SYNC-203ENST00000417633 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
SYNC-203ENST00000417633 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
SYNC-203ENST00000417633 CICQ96RK0 1608 aaPredicted RBP14.91□□□□□ -0.02
SYNC-203ENST00000417633 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
SYNC-203ENST00000417633 SOCS7O14512 581 aa14.9□□□□□ -0.02
SYNC-203ENST00000417633 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
SYNC-203ENST00000417633 SLC27A3Q5K4L6 730 aa14.9□□□□□ -0.02
SYNC-203ENST00000417633 EP400Q96L91 3159 aa14.89□□□□□ -0.03
SYNC-203ENST00000417633 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
SYNC-203ENST00000417633 ALDH1L2Q3SY69 923 aa14.89□□□□□ -0.03
SYNC-203ENST00000417633 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
SYNC-203ENST00000417633 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
SYNC-203ENST00000417633 PROM2Q8N271 834 aa14.89□□□□□ -0.03
SYNC-203ENST00000417633 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
SYNC-203ENST00000417633 C5P01031 1676 aa14.88□□□□□ -0.03
SYNC-203ENST00000417633 CACNA1FO60840 1977 aa14.88□□□□□ -0.03
SYNC-203ENST00000417633 STARD3NLO95772 234 aa14.88□□□□□ -0.03
SYNC-203ENST00000417633 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 CYP19A1P11511 503 aaPredicted RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 EIF2S2P20042 333 aaKnown RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 RARSP54136 660 aaKnown RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 SF3B2Q13435 895 aaKnown RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 ITPK1Q13572 414 aa14.88□□□□□ -0.03
SYNC-203ENST00000417633 HDGFL1Q5TGJ6 251 aa14.88□□□□□ -0.03
SYNC-203ENST00000417633 CCNL1Q9UK58 526 aaPredicted RBP14.88□□□□□ -0.03
SYNC-203ENST00000417633 TJP1Q07157 1748 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms