RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MLLT1Q03111 559 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-206ENST00000417628 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
ECHDC1-206ENST00000417628 LHX6Q9UPM6 363 aa8.39□□□□□ -1.07
ECHDC1-206ENST00000417628 KIF1AQ12756 1690 aa8.39□□□□□ -1.07
ECHDC1-206ENST00000417628 ARHGEF10O15013 1369 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 ROBO2Q9HCK4 1378 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 KIAA1210Q9ULL0 1709 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 SPATA31A1Q5TZJ5 1347 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 SLC15A2Q16348 729 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 LHX8Q68G74 356 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 FAM198AQ9UFP1 575 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 IQGAP3Q86VI3 1631 aa8.38□□□□□ -1.07
ECHDC1-206ENST00000417628 C11orf95C9JLR9 678 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-206ENST00000417628 COL9A1P20849 921 aa8.37□□□□□ -1.07
ECHDC1-206ENST00000417628 NLGN2Q8NFZ4 835 aa8.37□□□□□ -1.07
ECHDC1-206ENST00000417628 CDCA7LQ96GN5 454 aa8.37□□□□□ -1.07
ECHDC1-206ENST00000417628 HFM1A2PYH4 1435 aa8.37□□□□□ -1.07
ECHDC1-206ENST00000417628 PRAG1Q86YV5 1406 aa8.37□□□□□ -1.07
ECHDC1-206ENST00000417628 USP19O94966 1318 aa8.36□□□□□ -1.07
ECHDC1-206ENST00000417628 TULP4Q9NRJ4 1543 aa8.36□□□□□ -1.07
ECHDC1-206ENST00000417628 KRT28Q7Z3Y7 464 aa8.36□□□□□ -1.07
ECHDC1-206ENST00000417628 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 ZNF710Q8N1W2 664 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 OVOS2A0A0G2JMS6 1433 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 OVOS2A0A0J9YW53 1432 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 TECPR2O15040 1411 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 OVOS2Q6IE36 1432 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 SBNO1A3KN83 1393 aa8.35□□□□□ -1.07
ECHDC1-206ENST00000417628 POLD1P28340 1107 aa8.34□□□□□ -1.07
ECHDC1-206ENST00000417628 PSME1Q06323 249 aa8.34□□□□□ -1.07
ECHDC1-206ENST00000417628 BCL2L12Q9HB09 334 aa8.34□□□□□ -1.07
ECHDC1-206ENST00000417628 C3orf80F5H4A9 247 aa8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 FLIIQ13045 1269 aa8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 PPP4R3BQ5MIZ7 849 aa8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 ARHGEF28Q8N1W1 1705 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 PROCA1Q8NCQ7 364 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 EYA1Q99502 592 aa8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 TOPAZ1Q8N9V7 1692 aa8.33□□□□□ -1.08
ECHDC1-206ENST00000417628 TSKSQ9UJT2 592 aa8.32□□□□□ -1.08
ECHDC1-206ENST00000417628 NAIPQ13075 1403 aa8.31□□□□□ -1.08
ECHDC1-206ENST00000417628 RCCD1A6NED2 376 aa8.31□□□□□ -1.08
ECHDC1-206ENST00000417628 FSTL1Q12841 308 aa8.31□□□□□ -1.08
ECHDC1-206ENST00000417628 MYSM1Q5VVJ2 828 aa8.31□□□□□ -1.08
ECHDC1-206ENST00000417628 POLR3EQ9NVU0 708 aa8.31□□□□□ -1.08
ECHDC1-206ENST00000417628 PEAK1Q9H792 1746 aa8.31□□□□□ -1.08
ECHDC1-206ENST00000417628 MYOM3Q5VTT5 1437 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 PPP1R3GB7ZBB8 358 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 HOXB1P14653 301 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 TXNRD1Q16881 649 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 HOMEZQ8IX15 550 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 ABHD8Q96I13 439 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 USP35Q9P2H5 1018 aa8.3□□□□□ -1.08
ECHDC1-206ENST00000417628 RGS19P49795 217 aa8.29□□□□□ -1.08
ECHDC1-206ENST00000417628 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
ECHDC1-206ENST00000417628 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
ECHDC1-206ENST00000417628 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
ECHDC1-206ENST00000417628 ATP7BP35670 1465 aa8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 PTPREP23469 700 aa8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 NUDT18Q6ZVK8 323 aa8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 C16orf71Q8IYS4 520 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 PARP4Q9UKK3 1724 aaKnown RBP8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 PAPPAQ13219 1627 aa8.28□□□□□ -1.08
ECHDC1-206ENST00000417628 COL24A1Q17RW2 1714 aa8.27□□□□□ -1.09
ECHDC1-206ENST00000417628 MCM6Q14566 821 aa8.27□□□□□ -1.09
ECHDC1-206ENST00000417628 PMFBP1Q8TBY8 1022 aa8.27□□□□□ -1.09
ECHDC1-206ENST00000417628 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
ECHDC1-206ENST00000417628 C1orf115Q9H7X2 142 aa8.27□□□□□ -1.09
ECHDC1-206ENST00000417628 SSH2Q76I76 1423 aa8.27□□□□□ -1.09
ECHDC1-206ENST00000417628 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 FMN2Q9NZ56 1722 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 SNPHO15079 494 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 TCP11L2Q8N4U5 519 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 TATDN2Q93075 761 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 NMRK2Q9NPI5 230 aa8.26□□□□□ -1.09
ECHDC1-206ENST00000417628 SBF2Q86WG5 1849 aa8.25□□□□□ -1.09
ECHDC1-206ENST00000417628 CD46P15529 392 aa8.25□□□□□ -1.09
ECHDC1-206ENST00000417628 CLK2P49760 499 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-206ENST00000417628 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
ECHDC1-206ENST00000417628 PNMA3Q9UL41 463 aa8.25□□□□□ -1.09
ECHDC1-206ENST00000417628 A6NJR5 290 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 FOXN1O15353 648 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 DNAJB2P25686 324 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 PROX2Q3B8N5 592 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 CLUAP1Q96AJ1 413 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
ECHDC1-206ENST00000417628 THRAP3Q9Y2W1 955 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms