RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 SCN11AQ9UI33 1791 aa16.95■□□□□ 0.3
SEC22C-205ENST00000417572 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
SEC22C-205ENST00000417572 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
SEC22C-205ENST00000417572 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
SEC22C-205ENST00000417572 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
SEC22C-205ENST00000417572 CHL1O00533 1208 aa16.94■□□□□ 0.3
SEC22C-205ENST00000417572 GNAI1P63096 354 aa16.94■□□□□ 0.3
SEC22C-205ENST00000417572 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
SEC22C-205ENST00000417572 TOGARAM1Q9Y4F4 1720 aa16.94■□□□□ 0.3
SEC22C-205ENST00000417572 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
SEC22C-205ENST00000417572 MRC1P22897 1456 aa16.93■□□□□ 0.3
SEC22C-205ENST00000417572 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
SEC22C-205ENST00000417572 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
SEC22C-205ENST00000417572 BABAM1Q9NWV8 329 aa16.92■□□□□ 0.3
SEC22C-205ENST00000417572 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
SEC22C-205ENST00000417572 E9PSI1 815 aa16.91■□□□□ 0.3
SEC22C-205ENST00000417572 KCNQ3O43525 872 aa16.91■□□□□ 0.3
SEC22C-205ENST00000417572 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
SEC22C-205ENST00000417572 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
SEC22C-205ENST00000417572 TRIM37O94972 964 aa16.91■□□□□ 0.3
SEC22C-205ENST00000417572 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
SEC22C-205ENST00000417572 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
SEC22C-205ENST00000417572 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
SEC22C-205ENST00000417572 ASAP1Q9ULH1 1129 aa16.91■□□□□ 0.3
SEC22C-205ENST00000417572 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
SEC22C-205ENST00000417572 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
SEC22C-205ENST00000417572 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
SEC22C-205ENST00000417572 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
SEC22C-205ENST00000417572 ITGB4P16144 1822 aa16.88■□□□□ 0.29
SEC22C-205ENST00000417572 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
SEC22C-205ENST00000417572 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
SEC22C-205ENST00000417572 TTC5Q8N0Z6 440 aa16.87■□□□□ 0.29
SEC22C-205ENST00000417572 EIF4A1P60842 406 aaKnown RBP16.86■□□□□ 0.29
SEC22C-205ENST00000417572 KAT6BQ8WYB5 2073 aa16.86■□□□□ 0.29
SEC22C-205ENST00000417572 NHSQ6T4R5 1651 aa16.86■□□□□ 0.29
SEC22C-205ENST00000417572 SBF2Q86WG5 1849 aa16.86■□□□□ 0.29
SEC22C-205ENST00000417572 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
SEC22C-205ENST00000417572 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
SEC22C-205ENST00000417572 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
SEC22C-205ENST00000417572 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
SEC22C-205ENST00000417572 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
SEC22C-205ENST00000417572 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
SEC22C-205ENST00000417572 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
SEC22C-205ENST00000417572 ELL2O00472 640 aaPredicted RBP16.83■□□□□ 0.28
SEC22C-205ENST00000417572 APBA3O96018 575 aa16.83■□□□□ 0.28
SEC22C-205ENST00000417572 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
SEC22C-205ENST00000417572 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
SEC22C-205ENST00000417572 PALLDQ8WX93 1383 aa16.82■□□□□ 0.28
SEC22C-205ENST00000417572 TSPYL6Q8N831 410 aa16.82■□□□□ 0.28
SEC22C-205ENST00000417572 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
SEC22C-205ENST00000417572 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
SEC22C-205ENST00000417572 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
SEC22C-205ENST00000417572 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
SEC22C-205ENST00000417572 PRAMEF22A3QJZ6 481 aa16.8■□□□□ 0.28
SEC22C-205ENST00000417572 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
SEC22C-205ENST00000417572 SIK1P57059 783 aa16.8■□□□□ 0.28
SEC22C-205ENST00000417572 BTAF1O14981 1849 aa16.8■□□□□ 0.28
SEC22C-205ENST00000417572 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
SEC22C-205ENST00000417572 PAPPAQ13219 1627 aa16.8■□□□□ 0.28
SEC22C-205ENST00000417572 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
SEC22C-205ENST00000417572 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
SEC22C-205ENST00000417572 PLSCR1O15162 318 aa16.79■□□□□ 0.28
SEC22C-205ENST00000417572 VAMP4O75379 141 aa16.79■□□□□ 0.28
SEC22C-205ENST00000417572 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
SEC22C-205ENST00000417572 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
SEC22C-205ENST00000417572 KCNQ4P56696 695 aa16.78■□□□□ 0.28
SEC22C-205ENST00000417572 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
SEC22C-205ENST00000417572 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
SEC22C-205ENST00000417572 CCDC125Q86Z20 511 aa16.77■□□□□ 0.28
SEC22C-205ENST00000417572 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
SEC22C-205ENST00000417572 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.27
SEC22C-205ENST00000417572 HOXB7P09629 217 aa16.76■□□□□ 0.27
SEC22C-205ENST00000417572 EIF2S2P20042 333 aaKnown RBP16.76■□□□□ 0.27
SEC22C-205ENST00000417572 ITPK1Q13572 414 aa16.76■□□□□ 0.27
SEC22C-205ENST00000417572 PROM2Q8N271 834 aa16.76■□□□□ 0.27
SEC22C-205ENST00000417572 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
SEC22C-205ENST00000417572 NECTIN2Q92692 538 aa16.75■□□□□ 0.27
SEC22C-205ENST00000417572 TEX13AQ9BXU3 409 aaPredicted RBP16.75■□□□□ 0.27
SEC22C-205ENST00000417572 SOS1Q07889 1333 aaPredicted RBP16.75■□□□□ 0.27
SEC22C-205ENST00000417572 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
SEC22C-205ENST00000417572 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
SEC22C-205ENST00000417572 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■□□□□ 10.1
SEC22C-205ENST00000417572 LRRC4BQ9NT99 713 aa16.75■□□□□ 0.27
SEC22C-205ENST00000417572 TNS1Q9HBL0 1735 aaKnown RBP16.74■□□□□ 0.27
SEC22C-205ENST00000417572 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
SEC22C-205ENST00000417572 BAG6P46379 1132 aa16.74■□□□□ 0.27
SEC22C-205ENST00000417572 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
SEC22C-205ENST00000417572 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
SEC22C-205ENST00000417572 CAMKK2Q96RR4 588 aa16.74■□□□□ 0.27
SEC22C-205ENST00000417572 TCERG1O14776 1098 aaKnown RBP16.73■□□□□ 0.27
SEC22C-205ENST00000417572 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
SEC22C-205ENST00000417572 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
SEC22C-205ENST00000417572 SLC27A3Q5K4L6 730 aa16.73■□□□□ 0.27
SEC22C-205ENST00000417572 EP400Q96L91 3159 aa16.73■□□□□ 0.27
SEC22C-205ENST00000417572 STARD3NLO95772 234 aa16.72■□□□□ 0.27
SEC22C-205ENST00000417572 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
SEC22C-205ENST00000417572 LINC00116Q8NCU8 138 aa16.72■□□□□ 0.27
SEC22C-205ENST00000417572 A1BGP04217 495 aa16.71■□□□□ 0.27
SEC22C-205ENST00000417572 LY75O60449 1722 aa16.71■□□□□ 0.27
SEC22C-205ENST00000417572 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms