RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 BCCIPQ9P287 314 aaKnown RBP eCLIP7.71□□□□□ -1.18
CCNT1-202ENST00000417344 CC2D2AQ9P2K1 1620 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 WDR7Q9Y4E6 1490 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 CYP2C19P33261 490 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 CHD1LQ86WJ1 897 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 CHAMP1Q96JM3 812 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 LNPKQ9C0E8 428 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 KCNF1Q9H3M0 494 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 SLC24A3Q9HC58 644 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 RSPH14Q9UHP6 348 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 DDX19BQ9UMR2 479 aa7.7□□□□□ -1.18
CCNT1-202ENST00000417344 PBX2P40425 430 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 NOP2P46087 812 aaKnown RBP7.69□□□□□ -1.18
CCNT1-202ENST00000417344 ZGPATQ8N5A5 531 aaKnown RBP7.69□□□□□ -1.18
CCNT1-202ENST00000417344 ZNF397Q8NF99 534 aaPredicted RBP7.69□□□□□ -1.18
CCNT1-202ENST00000417344 LAMC1P11047 1609 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 EIF4G3O43432 1585 aaKnown RBP7.69□□□□□ -1.18
CCNT1-202ENST00000417344 ASXL1Q8IXJ9 1541 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 NUP155O75694 1391 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 LOC102724159A0A0B4J2E5 919 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 KDM4AO75164 1064 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 PWP2Q15269 919 aaKnown RBP7.69□□□□□ -1.18
CCNT1-202ENST00000417344 ZNF622Q969S3 477 aaKnown RBP eCLIP7.69□□□□□ -1.181e-8■■□□□ 13.8
CCNT1-202ENST00000417344 RASSF4Q9H2L5 321 aa7.69□□□□□ -1.18
CCNT1-202ENST00000417344 ADGRL2O95490 1459 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 ABCC10Q5T3U5 1492 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 GTF2A1P52655 376 aaPredicted RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 KMT5BQ4FZB7 885 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 CTR9Q6PD62 1173 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 ITPRIPQ8IWB1 547 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 WDR63Q8IWG1 891 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 NOL10Q9BSC4 688 aaKnown RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 PAXBP1Q9Y5B6 917 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 CFAP74Q9C0B2 1584 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 LAMC3Q9Y6N6 1575 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 UHRF1BP1LA0JNW5 1464 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 ANKRD50Q9ULJ7 1429 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 GOLGA6L6A8MZA4 724 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 IRF6O14896 467 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 DHX16O60231 1041 aaKnown RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 REC8O95072 547 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 CCDC112Q8NEF3 446 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 KIF1BPQ96EK5 621 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 FAM163AQ96GL9 167 aaPredicted RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 KCNG1Q9UIX4 513 aa7.68□□□□□ -1.18
CCNT1-202ENST00000417344 CDK13Q14004 1512 aaKnown RBP7.68□□□□□ -1.18
CCNT1-202ENST00000417344 KANK1Q14678 1352 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 CDC45O75419 566 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 NEUROD2Q15784 382 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 MYCBPQ99417 103 aaPredicted RBP7.67□□□□□ -1.18
CCNT1-202ENST00000417344 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 CCDC141Q6ZP82 1450 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 YEATS2Q9ULM3 1422 aa7.67□□□□□ -1.18
CCNT1-202ENST00000417344 HMGXB3Q12766 1538 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 ABCA10Q8WWZ4 1543 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 HCLS1P14317 486 aaPredicted RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 TRIM27P14373 513 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 PRSS12P56730 875 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 RBM6P78332 1123 aaKnown RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 ICE2Q659A1 982 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 SIRT1Q96EB6 747 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 ZBTB40Q9NUA8 1239 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 ADGBQ8N7X0 1667 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 BRD1O95696 1058 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 TNNT1P13805 278 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 MLECQ14165 292 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 MUM1L1Q5H9M0 696 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 FOXD4L5Q5VV16 416 aaPredicted RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 FOXD4L4Q8WXT5 416 aaPredicted RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 C16orf45Q96MC5 204 aaPredicted RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 NCAPGQ9BPX3 1015 aa7.66□□□□□ -1.18
CCNT1-202ENST00000417344 RRP7AQ9Y3A4 280 aaKnown RBP7.66□□□□□ -1.18
CCNT1-202ENST00000417344 AK9Q5TCS8 1911 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 SCAF11Q99590 1463 aaKnown RBP7.65□□□□□ -1.18
CCNT1-202ENST00000417344 SYNMO15061 1565 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 CCDC183Q5T5S1 534 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 FBXO38Q6PIJ6 1188 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 CNPY4Q8N129 248 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 ZNF687Q8N1G0 1237 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 CCDC102AQ96A19 550 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 TMX1Q9H3N1 280 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 SMC4Q9NTJ3 1288 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 ITSN2Q9NZM3 1697 aa7.65□□□□□ -1.18
CCNT1-202ENST00000417344 ARHGAP33O14559 1287 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 CT47B1P0C2W7 299 aaPredicted RBP7.64□□□□□ -1.19
CCNT1-202ENST00000417344 CASQ1P31415 396 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 BRPF1P55201 1214 aaPredicted RBP7.64□□□□□ -1.19
CCNT1-202ENST00000417344 LMOD3Q0VAK6 560 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 ANKRD45Q5TZF3 282 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 SPC24Q8NBT2 197 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 MARVELD3Q96A59 401 aa7.64□□□□□ -1.19
CCNT1-202ENST00000417344 RUNDC1Q96C34 613 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms