RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CCDC146Q8IYE0 955 aa30.48■■■□□ 2.47
SMARCB1-205ENST00000417137 PNISRQ8TF01 805 aaKnown RBP30.47■■■□□ 2.47
SMARCB1-205ENST00000417137 LRRC4BQ9NT99 713 aa30.47■■■□□ 2.47
SMARCB1-205ENST00000417137 PSDA5PKW4 1024 aaPredicted RBP30.46■■■□□ 2.47
SMARCB1-205ENST00000417137 DIEXFQ68CQ4 756 aaKnown RBP30.46■■■□□ 2.47
SMARCB1-205ENST00000417137 RREB1Q92766 1687 aa30.46■■■□□ 2.47
SMARCB1-205ENST00000417137 CEMIPQ8WUJ3 1361 aa30.45■■■□□ 2.47
SMARCB1-205ENST00000417137 STK32BQ9NY57 414 aa30.45■■■□□ 2.47
SMARCB1-205ENST00000417137 SCN11AQ9UI33 1791 aa30.45■■■□□ 2.46
SMARCB1-205ENST00000417137 LOC102724428A0A0B4J2F2 783 aa30.44■■■□□ 2.46
SMARCB1-205ENST00000417137 TMPOP42166 694 aaKnown RBP30.44■■■□□ 2.46
SMARCB1-205ENST00000417137 SIK1P57059 783 aa30.44■■■□□ 2.46
SMARCB1-205ENST00000417137 RIPK4P57078 832 aa30.44■■■□□ 2.46
SMARCB1-205ENST00000417137 MCM10Q7L590 875 aa30.44■■■□□ 2.46
SMARCB1-205ENST00000417137 LMOD3Q0VAK6 560 aa30.43■■■□□ 2.46
SMARCB1-205ENST00000417137 KCNQ4P56696 695 aa30.42■■■□□ 2.46
SMARCB1-205ENST00000417137 RBM42Q9BTD8 480 aaKnown RBP30.42■■■□□ 2.46
SMARCB1-205ENST00000417137 MRC1P22897 1456 aa30.42■■■□□ 2.46
SMARCB1-205ENST00000417137 R3HDM1Q15032 1099 aaKnown RBP30.41■■■□□ 2.46
SMARCB1-205ENST00000417137 ADAMTS7Q9UKP4 1686 aa30.41■■■□□ 2.46
SMARCB1-205ENST00000417137 NUP188Q5SRE5 1749 aa30.4■■■□□ 2.46
SMARCB1-205ENST00000417137 ATP6V1AP38606 617 aa30.4■■■□□ 2.46
SMARCB1-205ENST00000417137 DCTN1Q14203 1278 aa30.4■■■□□ 2.46
SMARCB1-205ENST00000417137 SLC15A2Q16348 729 aa30.39■■■□□ 2.46
SMARCB1-205ENST00000417137 TTC5Q8N0Z6 440 aa30.39■■■□□ 2.46
SMARCB1-205ENST00000417137 PTCD1O75127 700 aaKnown RBP30.38■■■□□ 2.45
SMARCB1-205ENST00000417137 ANO8Q9HCE9 1232 aaPredicted RBP30.38■■■□□ 2.45
SMARCB1-205ENST00000417137 LY75O60449 1722 aa30.38■■■□□ 2.45
SMARCB1-205ENST00000417137 BTBD11A6QL63 1104 aa30.37■■■□□ 2.45
SMARCB1-205ENST00000417137 SLC39A6Q13433 755 aa30.37■■■□□ 2.45
SMARCB1-205ENST00000417137 NEUROD2Q15784 382 aa30.37■■■□□ 2.45
SMARCB1-205ENST00000417137 TAF7Q15545 349 aaPredicted RBP30.36■■■□□ 2.45
SMARCB1-205ENST00000417137 RRP7AQ9Y3A4 280 aaKnown RBP30.36■■■□□ 2.45
SMARCB1-205ENST00000417137 CCER2I3L3R5 266 aa30.34■■■□□ 2.45
SMARCB1-205ENST00000417137 ZNF790Q6PG37 636 aa30.34■■■□□ 2.45
SMARCB1-205ENST00000417137 AKT1S1Q96B36 256 aa30.34■■■□□ 2.45
SMARCB1-205ENST00000417137 APAF1O14727 1248 aa30.33■■■□□ 2.45
SMARCB1-205ENST00000417137 FAM9BQ8IZU0 186 aa30.32■■■□□ 2.44
SMARCB1-205ENST00000417137 TFCP2L1Q9NZI6 479 aa30.32■■■□□ 2.44
SMARCB1-205ENST00000417137 ITPK1Q13572 414 aa30.3■■■□□ 2.44
SMARCB1-205ENST00000417137 ZNF827Q17R98 1081 aa30.3■■■□□ 2.44
SMARCB1-205ENST00000417137 VSIG10Q8N0Z9 540 aa30.3■■■□□ 2.44
SMARCB1-205ENST00000417137 SLC4A9Q96Q91 983 aa30.3■■■□□ 2.44
SMARCB1-205ENST00000417137 AK7Q96M32 723 aa30.29■■■□□ 2.44
SMARCB1-205ENST00000417137 THUMPD2Q9BTF0 503 aaKnown RBP30.29■■■□□ 2.44
SMARCB1-205ENST00000417137 LINC00116Q8NCU8 138 aa30.28■■■□□ 2.44
SMARCB1-205ENST00000417137 VIRMAQ69YN4 1812 aaKnown RBP30.28■■■□□ 2.44
SMARCB1-205ENST00000417137 PAPPAQ13219 1627 aa30.27■■■□□ 2.44
SMARCB1-205ENST00000417137 FMNL2Q96PY5 1086 aa30.27■■■□□ 2.44
SMARCB1-205ENST00000417137 TRIM35Q9UPQ4 493 aa30.27■■■□□ 2.44
SMARCB1-205ENST00000417137 DLG5Q8TDM6 1919 aa30.26■■■□□ 2.43
SMARCB1-205ENST00000417137 RC3H1Q5TC82 1133 aaKnown RBP30.25■■■□□ 2.43
SMARCB1-205ENST00000417137 ZNF496Q96IT1 587 aaPredicted RBP30.25■■■□□ 2.43
SMARCB1-205ENST00000417137 TEX13AQ9BXU3 409 aaPredicted RBP30.25■■■□□ 2.43
SMARCB1-205ENST00000417137 FLAD1Q8NFF5 587 aa30.24■■■□□ 2.43
SMARCB1-205ENST00000417137 BABAM1Q9NWV8 329 aa30.24■■■□□ 2.43
SMARCB1-205ENST00000417137 MIS18AQ9NYP9 233 aa30.23■■■□□ 2.43
SMARCB1-205ENST00000417137 KCNQ3O43525 872 aa30.22■■■□□ 2.43
SMARCB1-205ENST00000417137 CALD1Q05682 793 aaKnown RBP30.22■■■□□ 2.43
SMARCB1-205ENST00000417137 DNAJC10Q8IXB1 793 aa30.22■■■□□ 2.43
SMARCB1-205ENST00000417137 ZNF831Q5JPB2 1677 aa30.22■■■□□ 2.43
SMARCB1-205ENST00000417137 SIPA1L3O60292 1781 aaPredicted RBP30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 C5P01031 1676 aa30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 HEG1Q9ULI3 1381 aa30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 NCBP3Q53F19 620 aaKnown RBP30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 MIER1Q8N108 512 aa30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 KCPQ6ZWJ8 1503 aa30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 CNTNAP4Q9C0A0 1308 aa30.21■■■□□ 2.43
SMARCB1-205ENST00000417137 STARD3NLO95772 234 aa30.2■■■□□ 2.43
SMARCB1-205ENST00000417137 GNPATO15228 680 aa30.19■■■□□ 2.42
SMARCB1-205ENST00000417137 TSPYL4Q9UJ04 414 aa30.19■■■□□ 2.42
SMARCB1-205ENST00000417137 PNPLA7Q6ZV29 1317 aa30.19■■■□□ 2.42
SMARCB1-205ENST00000417137 CRKLP46109 303 aaKnown RBP30.18■■■□□ 2.42
SMARCB1-205ENST00000417137 RTCBQ9Y3I0 505 aaKnown RBP30.18■■■□□ 2.42
SMARCB1-205ENST00000417137 C4BP0C0L5 1744 aa30.18■■■□□ 2.42
SMARCB1-205ENST00000417137 MSH5O43196 834 aa30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 SNRPA1P09661 255 aaKnown RBP30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 CYP19A1P11511 503 aaPredicted RBP30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 SSFA2P28290 1259 aa30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 CCDC27Q2M243 656 aa30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 SLC16A10Q8TF71 515 aa30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 TAF1LQ8IZX4 1826 aa30.17■■■□□ 2.42
SMARCB1-205ENST00000417137 NGEFQ8N5V2 710 aa30.16■■■□□ 2.42
SMARCB1-205ENST00000417137 LAS1LQ9Y4W2 734 aaKnown RBP30.16■■■□□ 2.42
SMARCB1-205ENST00000417137 RPS6KA4O75676 772 aa30.15■■■□□ 2.42
SMARCB1-205ENST00000417137 PDGFDQ9GZP0 370 aaPredicted RBP30.15■■■□□ 2.42
SMARCB1-205ENST00000417137 CCDC87Q9NVE4 849 aa30.15■■■□□ 2.42
SMARCB1-205ENST00000417137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.14■■■□□ 2.42
SMARCB1-205ENST00000417137 CHL1O00533 1208 aa30.14■■■□□ 2.42
SMARCB1-205ENST00000417137 COL23A1Q86Y22 540 aaPredicted RBP30.14■■■□□ 2.42
SMARCB1-205ENST00000417137 PHF14O94880 888 aa30.13■■■□□ 2.41
SMARCB1-205ENST00000417137 EIF4A1P60842 406 aaKnown RBP30.13■■■□□ 2.41
SMARCB1-205ENST00000417137 TRAPPC3LQ5T215 181 aa30.13■■■□□ 2.41
SMARCB1-205ENST00000417137 CFAP44Q96MT7 982 aa30.13■■■□□ 2.41
SMARCB1-205ENST00000417137 SPON1Q9HCB6 807 aa30.13■■■□□ 2.41
SMARCB1-205ENST00000417137 UBR2Q8IWV8 1755 aa30.13■■■□□ 2.41
SMARCB1-205ENST00000417137 ADRA2BP18089 450 aa30.12■■■□□ 2.41
SMARCB1-205ENST00000417137 INTS5Q6P9B9 1019 aaKnown RBP30.12■■■□□ 2.41
SMARCB1-205ENST00000417137 MTFR1LQ9H019 292 aa30.12■■■□□ 2.41
SMARCB1-205ENST00000417137 WWC1Q8IX03 1113 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms