RNA–Protein interactions for RNA: ENST00000417023.5

DDX39B-203, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-203ENST00000417023 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
DDX39B-203ENST00000417023 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
DDX39B-203ENST00000417023 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
DDX39B-203ENST00000417023 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
DDX39B-203ENST00000417023 CICQ96RK0 1608 aaPredicted RBP17.12■□□□□ 0.33
DDX39B-203ENST00000417023 ANP32CO43423 234 aa17.12■□□□□ 0.33
DDX39B-203ENST00000417023 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
DDX39B-203ENST00000417023 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
DDX39B-203ENST00000417023 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
DDX39B-203ENST00000417023 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
DDX39B-203ENST00000417023 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
DDX39B-203ENST00000417023 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
DDX39B-203ENST00000417023 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
DDX39B-203ENST00000417023 NEFMP07197 916 aa17.11■□□□□ 0.33
DDX39B-203ENST00000417023 KCNQ4P56696 695 aa17.11■□□□□ 0.33
DDX39B-203ENST00000417023 SIK1P57059 783 aa17.11■□□□□ 0.33
DDX39B-203ENST00000417023 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
DDX39B-203ENST00000417023 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
DDX39B-203ENST00000417023 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDX39B-203ENST00000417023 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
DDX39B-203ENST00000417023 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
DDX39B-203ENST00000417023 LRP5O75197 1615 aa17.08■□□□□ 0.32
DDX39B-203ENST00000417023 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.32
DDX39B-203ENST00000417023 NFE2L2Q16236 605 aa17.08■□□□□ 0.32
DDX39B-203ENST00000417023 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
DDX39B-203ENST00000417023 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
DDX39B-203ENST00000417023 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
DDX39B-203ENST00000417023 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
DDX39B-203ENST00000417023 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
DDX39B-203ENST00000417023 TEFQ10587 303 aa17.06■□□□□ 0.32
DDX39B-203ENST00000417023 ITPK1Q13572 414 aa17.06■□□□□ 0.32
DDX39B-203ENST00000417023 RTF1Q92541 710 aaKnown RBP17.06■□□□□ 0.32
DDX39B-203ENST00000417023 TJP1Q07157 1748 aa17.06■□□□□ 0.32
DDX39B-203ENST00000417023 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
DDX39B-203ENST00000417023 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
DDX39B-203ENST00000417023 UBR3Q6ZT12 1888 aa17.05■□□□□ 0.32
DDX39B-203ENST00000417023 MCM10Q7L590 875 aa17.04■□□□□ 0.32
DDX39B-203ENST00000417023 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
DDX39B-203ENST00000417023 PNPLA7Q6ZV29 1317 aa17.03■□□□□ 0.32
DDX39B-203ENST00000417023 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
DDX39B-203ENST00000417023 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
DDX39B-203ENST00000417023 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
DDX39B-203ENST00000417023 PNISRQ8TF01 805 aaKnown RBP17.03■□□□□ 0.32
DDX39B-203ENST00000417023 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
DDX39B-203ENST00000417023 PDGFDQ9GZP0 370 aaPredicted RBP17.03■□□□□ 0.32
DDX39B-203ENST00000417023 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
DDX39B-203ENST00000417023 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
DDX39B-203ENST00000417023 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
DDX39B-203ENST00000417023 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
DDX39B-203ENST00000417023 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
DDX39B-203ENST00000417023 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
DDX39B-203ENST00000417023 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
DDX39B-203ENST00000417023 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
DDX39B-203ENST00000417023 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
DDX39B-203ENST00000417023 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
DDX39B-203ENST00000417023 BTBD11A6QL63 1104 aa17■□□□□ 0.31
DDX39B-203ENST00000417023 RIPK4P57078 832 aa17■□□□□ 0.31
DDX39B-203ENST00000417023 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
DDX39B-203ENST00000417023 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
DDX39B-203ENST00000417023 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
DDX39B-203ENST00000417023 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
DDX39B-203ENST00000417023 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
DDX39B-203ENST00000417023 FLAD1Q8NFF5 587 aa16.99■□□□□ 0.31
DDX39B-203ENST00000417023 SLC16A10Q8TF71 515 aa16.99■□□□□ 0.31
DDX39B-203ENST00000417023 AK7Q96M32 723 aa16.99■□□□□ 0.31
DDX39B-203ENST00000417023 SSFA2P28290 1259 aa16.98■□□□□ 0.31
DDX39B-203ENST00000417023 AMIGO3Q86WK7 504 aa16.98■□□□□ 0.31
DDX39B-203ENST00000417023 COL23A1Q86Y22 540 aaPredicted RBP16.98■□□□□ 0.31
DDX39B-203ENST00000417023 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
DDX39B-203ENST00000417023 MTFR1LQ9H019 292 aa16.98■□□□□ 0.31
DDX39B-203ENST00000417023 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
DDX39B-203ENST00000417023 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
DDX39B-203ENST00000417023 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
DDX39B-203ENST00000417023 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
DDX39B-203ENST00000417023 GNPATO15228 680 aa16.96■□□□□ 0.31
DDX39B-203ENST00000417023 KCNQ3O43525 872 aa16.96■□□□□ 0.31
DDX39B-203ENST00000417023 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
DDX39B-203ENST00000417023 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.31
DDX39B-203ENST00000417023 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
DDX39B-203ENST00000417023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.95■□□□□ 0.3
DDX39B-203ENST00000417023 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
DDX39B-203ENST00000417023 ZBTB7AO95365 584 aa16.95■□□□□ 0.3
DDX39B-203ENST00000417023 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
DDX39B-203ENST00000417023 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
DDX39B-203ENST00000417023 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
DDX39B-203ENST00000417023 APAF1O14727 1248 aa16.94■□□□□ 0.3
DDX39B-203ENST00000417023 ADRA2BP18089 450 aa16.94■□□□□ 0.3
DDX39B-203ENST00000417023 PTGER2P43116 358 aa16.94■□□□□ 0.3
DDX39B-203ENST00000417023 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
DDX39B-203ENST00000417023 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
DDX39B-203ENST00000417023 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
DDX39B-203ENST00000417023 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
DDX39B-203ENST00000417023 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
DDX39B-203ENST00000417023 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
DDX39B-203ENST00000417023 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
DDX39B-203ENST00000417023 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
DDX39B-203ENST00000417023 PHF14O94880 888 aa16.91■□□□□ 0.3
DDX39B-203ENST00000417023 STARD3NLO95772 234 aa16.91■□□□□ 0.3
DDX39B-203ENST00000417023 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
DDX39B-203ENST00000417023 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms