RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CEP63Q96MT8 703 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 EPAS1Q99814 870 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 ZBTB3Q9H5J0 574 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 VTI1BQ9UEU0 232 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 SFMBT1Q9UHJ3 866 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 BOLA1Q9Y3E2 137 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 IFRD1O00458 451 aaPredicted RBP3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 PRPF40AO75400 957 aaKnown RBP3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 LDHAP00338 332 aaKnown RBP3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 TNNI2P48788 182 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 FAM193AP78312 1265 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 HLTFQ14527 1009 aaKnown RBP eCLIP3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 PPP2R5AQ15172 486 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 ARSHQ5FYA8 562 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 ICE2Q659A1 982 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 TMC4Q7Z404 712 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 PLPP6Q8IY26 295 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 PXYLP1Q8TE99 480 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 STAG1Q8WVM7 1258 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 APBA2Q99767 749 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 ZHX3Q9H4I2 956 aa3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 MKRN1Q9UHC7 482 aaKnown RBP3.99□□□□□ -1.77
CTDSPL-203ENST00000416688 MOXD2PA6NHM9 499 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L5A8MUK1 530 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 TCERG1O14776 1098 aaKnown RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 GPR37L1O60883 481 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 RGS20O76081 388 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 FOSP01100 380 aaPredicted RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 P4HBP07237 508 aaKnown RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 SKIP12755 728 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 NOS2P35228 1153 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 EVA1CP58658 441 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 AMPD3Q01432 767 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 FKBP4Q02790 459 aaKnown RBP eCLIP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 PSMD2Q13200 908 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 PTK7Q13308 1070 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 ZNF211Q13398 564 aaPredicted RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 RAPGEF1Q13905 1077 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 MAPRE1Q15691 268 aaKnown RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 MAP9Q49MG5 647 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 CRTC2Q53ET0 693 aaPredicted RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 C3orf67Q6ZVT6 689 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 ANKMY2Q8IV38 441 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 SULF1Q8IWU6 871 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 DRC7Q8IY82 874 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 RUNDC1Q96C34 613 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 MPHOSPH6Q99547 160 aaKnown RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 INO80BQ9C086 356 aaPredicted RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 ARHGEF10LQ9HCE6 1279 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 NPDC1Q9NQX5 325 aaPredicted RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 HOMER2Q9NSB8 354 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 MAP3K20Q9NYL2 800 aaKnown RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 SLAIN2Q9P270 581 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 PARP2Q9UGN5 583 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 TPX2Q9ULW0 747 aaKnown RBP3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 FRMD4BQ9Y2L6 1034 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 NUB1Q9Y5A7 615 aa3.98□□□□□ -1.77
CTDSPL-203ENST00000416688 CFAP69A5D8W1 941 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 PPP1R3GB7ZBB8 358 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 SNPHO15079 494 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 MAP3K7O43318 606 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 NR1I2O75469 434 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 MYL1P05976 194 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 LDHBP07195 334 aaKnown RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 COL6A1P12109 1028 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 HOXB3P14651 431 aaPredicted RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 CHMP4BP1P59074 171 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 RBM10P98175 930 aaKnown RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 ATP2B2Q01814 1243 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 AXDND1Q5T1B0 1012 aaPredicted RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 EFCAB2Q5VUJ9 269 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 PPP4R4Q6NUP7 873 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 TMEM92Q6UXU6 159 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 TAS1R3Q7RTX0 852 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 MCF2L2Q86YR7 1114 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 CDAN1Q8IWY9 1227 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 SECISBP2LQ93073 1101 aaKnown RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 YTHDC1Q96MU7 727 aaKnown RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 HMX1Q9NP08 348 aaPredicted RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 CASS4Q9NQ75 786 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 ANO2Q9NQ90 1003 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 CYLDQ9NQC7 956 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 AVENQ9NQS1 362 aaPredicted RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 TTF2Q9UNY4 1162 aaKnown RBP3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 EID1Q9Y6B2 187 aa3.97□□□□□ -1.77
CTDSPL-203ENST00000416688 PRMT3O60678 531 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 CDC45O75419 566 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 FGAP02671 866 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 VDRP11473 427 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 GNALP38405 381 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 USP5P45974 858 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 DAB2P98082 770 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 ARHGAP4P98171 946 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 EXOSC10Q01780 885 aaKnown RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 EN1Q05925 392 aaPredicted RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 CTDSPL2Q05D32 466 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 WDR75Q8IWA0 830 aaKnown RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 C1orf131Q8NDD1 294 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms