RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
NCKIPSD-204ENST00000416649 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
NCKIPSD-204ENST00000416649 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
NCKIPSD-204ENST00000416649 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
NCKIPSD-204ENST00000416649 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
NCKIPSD-204ENST00000416649 CCDC61Q9Y6R9 512 aa17.78■□□□□ 0.44
NCKIPSD-204ENST00000416649 SDSP20132 328 aa17.78■□□□□ 0.44
NCKIPSD-204ENST00000416649 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.44
NCKIPSD-204ENST00000416649 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
NCKIPSD-204ENST00000416649 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.43
NCKIPSD-204ENST00000416649 USP48Q86UV5 1035 aa17.76■□□□□ 0.43
NCKIPSD-204ENST00000416649 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
NCKIPSD-204ENST00000416649 DTNBO60941 627 aa17.76■□□□□ 0.43
NCKIPSD-204ENST00000416649 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 REC8O95072 547 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 KCNJ4P48050 445 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 FAM184AQ8NB25 1140 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 PLEKHF1Q96S99 279 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 ADAMTS13Q76LX8 1427 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 SPTLC3Q9NUV7 552 aa17.75■□□□□ 0.43
NCKIPSD-204ENST00000416649 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
NCKIPSD-204ENST00000416649 BRD1O95696 1058 aa17.74■□□□□ 0.43
NCKIPSD-204ENST00000416649 KCNA6P17658 529 aa17.74■□□□□ 0.43
NCKIPSD-204ENST00000416649 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
NCKIPSD-204ENST00000416649 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
NCKIPSD-204ENST00000416649 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
NCKIPSD-204ENST00000416649 TAF3Q5VWG9 929 aa17.73■□□□□ 0.43
NCKIPSD-204ENST00000416649 UVSSAQ2YD98 709 aa17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 UBR1Q8IWV7 1749 aa17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 NAA30Q147X3 362 aaPredicted RBP17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 ANKRD7Q92527 254 aa17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 COG3Q96JB2 828 aa17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 ACEP12821 1306 aa17.72■□□□□ 0.43
NCKIPSD-204ENST00000416649 KIAA1524Q8TCG1 905 aa17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 OGFRQ9NZT2 677 aa17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 PTPRUQ92729 1446 aa17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 ERC2O15083 957 aa17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 KDM4AO75164 1064 aa17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 MRPL50Q8N5N7 158 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 C16orf45Q96MC5 204 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-204ENST00000416649 ERICH4A6NGS2 130 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 FEZ1Q99689 392 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 KCNF1Q9H3M0 494 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 C3P01024 1663 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 IL16Q14005 1332 aa17.7■□□□□ 0.42
NCKIPSD-204ENST00000416649 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-204ENST00000416649 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
NCKIPSD-204ENST00000416649 NCBP1Q09161 790 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-204ENST00000416649 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
NCKIPSD-204ENST00000416649 CNPY2Q9Y2B0 182 aa17.69■□□□□ 0.42
NCKIPSD-204ENST00000416649 NSD2O96028 1365 aa17.69■□□□□ 0.42
NCKIPSD-204ENST00000416649 VAMP4O75379 141 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 FIBPO43427 364 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 PLEKHG1Q9ULL1 1385 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 SETD1AO15047 1707 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 PHACTR3Q96KR7 559 aa17.68■□□□□ 0.42
NCKIPSD-204ENST00000416649 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-204ENST00000416649 IPO4Q8TEX9 1081 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-204ENST00000416649 ZNF592Q92610 1267 aa17.67■□□□□ 0.42
NCKIPSD-204ENST00000416649 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
NCKIPSD-204ENST00000416649 IFT57Q9NWB7 429 aa17.67■□□□□ 0.42
NCKIPSD-204ENST00000416649 AP5Z1O43299 807 aa17.66■□□□□ 0.42
NCKIPSD-204ENST00000416649 IRX5P78411 483 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-204ENST00000416649 DRC7Q8IY82 874 aa17.66■□□□□ 0.42
NCKIPSD-204ENST00000416649 PTGS1P23219 599 aa17.66■□□□□ 0.42
NCKIPSD-204ENST00000416649 ANO2Q9NQ90 1003 aa17.66■□□□□ 0.42
NCKIPSD-204ENST00000416649 PALD1Q9ULE6 856 aa17.66■□□□□ 0.42
NCKIPSD-204ENST00000416649 MX1P20591 662 aa17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 CHMP3Q9Y3E7 222 aa17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 MED14O60244 1454 aa17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 CPS1P31327 1500 aa17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 GOLGA6L6A8MZA4 724 aa17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 CTIFO43310 598 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-204ENST00000416649 LARP6Q9BRS8 491 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-204ENST00000416649 SRCIN1Q9C0H9 1055 aa17.64■□□□□ 0.41
NCKIPSD-204ENST00000416649 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-204ENST00000416649 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-204ENST00000416649 ADGRB2O60241 1585 aa17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 SLFN14P0C7P3 912 aa17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 GABPB1Q06547 395 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 TBX22Q9Y458 520 aa17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 V9GYY5 206 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 ANKLE2Q86XL3 938 aa17.63■□□□□ 0.41
NCKIPSD-204ENST00000416649 MCCP23508 829 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 LRMPQ12912 555 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms