RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
YIPF3-203ENST00000416380 MCM10Q7L590 875 aa16.88■□□□□ 0.29
YIPF3-203ENST00000416380 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-203ENST00000416380 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
YIPF3-203ENST00000416380 TMOD3Q9NYL9 352 aa16.87■□□□□ 0.29
YIPF3-203ENST00000416380 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
YIPF3-203ENST00000416380 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
YIPF3-203ENST00000416380 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
YIPF3-203ENST00000416380 SF3B2Q13435 895 aaKnown RBP16.85■□□□□ 0.29
YIPF3-203ENST00000416380 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
YIPF3-203ENST00000416380 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
YIPF3-203ENST00000416380 KCNQ4P56696 695 aa16.84■□□□□ 0.29
YIPF3-203ENST00000416380 CABP4P57796 275 aa16.84■□□□□ 0.29
YIPF3-203ENST00000416380 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
YIPF3-203ENST00000416380 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
YIPF3-203ENST00000416380 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
YIPF3-203ENST00000416380 APAF1O14727 1248 aa16.83■□□□□ 0.28
YIPF3-203ENST00000416380 RIPK4P57078 832 aa16.83■□□□□ 0.28
YIPF3-203ENST00000416380 ITPK1Q13572 414 aa16.83■□□□□ 0.28
YIPF3-203ENST00000416380 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
YIPF3-203ENST00000416380 CICQ96RK0 1608 aaPredicted RBP16.83■□□□□ 0.28
YIPF3-203ENST00000416380 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
YIPF3-203ENST00000416380 KCNQ3O43525 872 aa16.82■□□□□ 0.28
YIPF3-203ENST00000416380 SLC39A6Q13433 755 aa16.82■□□□□ 0.28
YIPF3-203ENST00000416380 SLC27A3Q5K4L6 730 aa16.82■□□□□ 0.28
YIPF3-203ENST00000416380 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
YIPF3-203ENST00000416380 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
YIPF3-203ENST00000416380 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
YIPF3-203ENST00000416380 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
YIPF3-203ENST00000416380 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
YIPF3-203ENST00000416380 SIK1P57059 783 aa16.8■□□□□ 0.28
YIPF3-203ENST00000416380 ZNF827Q17R98 1081 aa16.8■□□□□ 0.28
YIPF3-203ENST00000416380 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
YIPF3-203ENST00000416380 AMIGO3Q86WK7 504 aa16.79■□□□□ 0.28
YIPF3-203ENST00000416380 TJP1Q07157 1748 aa16.79■□□□□ 0.28
YIPF3-203ENST00000416380 ZNF853P0CG23 659 aa16.78■□□□□ 0.28
YIPF3-203ENST00000416380 CCDC27Q2M243 656 aa16.78■□□□□ 0.28
YIPF3-203ENST00000416380 ZNF790Q6PG37 636 aa16.78■□□□□ 0.28
YIPF3-203ENST00000416380 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
YIPF3-203ENST00000416380 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
YIPF3-203ENST00000416380 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-203ENST00000416380 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
YIPF3-203ENST00000416380 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
YIPF3-203ENST00000416380 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.27
YIPF3-203ENST00000416380 ZNF521Q96K83 1311 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 C5P01031 1676 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 TEFQ10587 303 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
YIPF3-203ENST00000416380 MIS18AQ9NYP9 233 aa16.76■□□□□ 0.27
YIPF3-203ENST00000416380 COL5A3P25940 1745 aaPredicted RBP16.76■□□□□ 0.27
YIPF3-203ENST00000416380 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
YIPF3-203ENST00000416380 CHL1O00533 1208 aa16.75■□□□□ 0.27
YIPF3-203ENST00000416380 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
YIPF3-203ENST00000416380 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
YIPF3-203ENST00000416380 NEFMP07197 916 aa16.74■□□□□ 0.27
YIPF3-203ENST00000416380 SLC15A2Q16348 729 aa16.74■□□□□ 0.27
YIPF3-203ENST00000416380 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
YIPF3-203ENST00000416380 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
YIPF3-203ENST00000416380 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
YIPF3-203ENST00000416380 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
YIPF3-203ENST00000416380 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
YIPF3-203ENST00000416380 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
YIPF3-203ENST00000416380 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
YIPF3-203ENST00000416380 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
YIPF3-203ENST00000416380 ATP6V1AP38606 617 aa16.72■□□□□ 0.27
YIPF3-203ENST00000416380 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
YIPF3-203ENST00000416380 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
YIPF3-203ENST00000416380 INTS5Q6P9B9 1019 aaKnown RBP16.72■□□□□ 0.27
YIPF3-203ENST00000416380 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
YIPF3-203ENST00000416380 TUBGCP6Q96RT7 1819 aa16.71■□□□□ 0.27
YIPF3-203ENST00000416380 R3HDM1Q15032 1099 aaKnown RBP16.71■□□□□ 0.27
YIPF3-203ENST00000416380 SMIM5Q71RC9 77 aa16.71■□□□□ 0.27
YIPF3-203ENST00000416380 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
YIPF3-203ENST00000416380 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
YIPF3-203ENST00000416380 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
YIPF3-203ENST00000416380 RC3H1Q5TC82 1133 aaKnown RBP16.7■□□□□ 0.26
YIPF3-203ENST00000416380 QSER1Q2KHR3 1735 aa16.7■□□□□ 0.26
YIPF3-203ENST00000416380 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
YIPF3-203ENST00000416380 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
YIPF3-203ENST00000416380 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
YIPF3-203ENST00000416380 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
YIPF3-203ENST00000416380 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
YIPF3-203ENST00000416380 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
YIPF3-203ENST00000416380 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
YIPF3-203ENST00000416380 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
YIPF3-203ENST00000416380 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
YIPF3-203ENST00000416380 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
YIPF3-203ENST00000416380 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
YIPF3-203ENST00000416380 IFT57Q9NWB7 429 aa16.67■□□□□ 0.26
YIPF3-203ENST00000416380 IL16Q14005 1332 aa16.67■□□□□ 0.26
YIPF3-203ENST00000416380 CRKLP46109 303 aaKnown RBP16.66■□□□□ 0.26
YIPF3-203ENST00000416380 COL23A1Q86Y22 540 aaPredicted RBP16.66■□□□□ 0.26
YIPF3-203ENST00000416380 TTC5Q8N0Z6 440 aa16.66■□□□□ 0.26
YIPF3-203ENST00000416380 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
YIPF3-203ENST00000416380 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
YIPF3-203ENST00000416380 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
YIPF3-203ENST00000416380 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms