RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 RGPD4Q7Z3J3 1758 aa26.05■■□□□ 1.76
FAM3A-207ENST00000416319 BTAF1O14981 1849 aa26.05■■□□□ 1.76
FAM3A-207ENST00000416319 ATG3Q9NT62 314 aa26.05■■□□□ 1.76
FAM3A-207ENST00000416319 RRP7AQ9Y3A4 280 aaKnown RBP26.05■■□□□ 1.76
FAM3A-207ENST00000416319 ASAP1Q9ULH1 1129 aa26.04■■□□□ 1.76
FAM3A-207ENST00000416319 ITGB4P16144 1822 aa26.03■■□□□ 1.76
FAM3A-207ENST00000416319 DCTN1Q14203 1278 aa26.03■■□□□ 1.76
FAM3A-207ENST00000416319 EZH2Q15910 746 aaKnown RBP26.03■■□□□ 1.76
FAM3A-207ENST00000416319 SLC27A3Q5K4L6 730 aa26.03■■□□□ 1.76
FAM3A-207ENST00000416319 TRIM35Q9UPQ4 493 aa26.03■■□□□ 1.76
FAM3A-207ENST00000416319 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
FAM3A-207ENST00000416319 NEUROD2Q15784 382 aa26.02■■□□□ 1.76
FAM3A-207ENST00000416319 PROM2Q8N271 834 aa26.02■■□□□ 1.76
FAM3A-207ENST00000416319 NGEFQ8N5V2 710 aa26.02■■□□□ 1.76
FAM3A-207ENST00000416319 KAT6BQ8WYB5 2073 aa26.02■■□□□ 1.76
FAM3A-207ENST00000416319 HMGB2P26583 209 aaKnown RBP26.01■■□□□ 1.75
FAM3A-207ENST00000416319 TXNRD1Q16881 649 aa26.01■■□□□ 1.75
FAM3A-207ENST00000416319 CCDC27Q2M243 656 aa26.01■■□□□ 1.75
FAM3A-207ENST00000416319 TAF7Q15545 349 aaPredicted RBP25.99■■□□□ 1.75
FAM3A-207ENST00000416319 BTBD11A6QL63 1104 aa25.97■■□□□ 1.75
FAM3A-207ENST00000416319 THUMPD2Q9BTF0 503 aaKnown RBP25.97■■□□□ 1.75
FAM3A-207ENST00000416319 BABAM1Q9NWV8 329 aa25.97■■□□□ 1.75
FAM3A-207ENST00000416319 LOC102724428A0A0B4J2F2 783 aa25.96■■□□□ 1.75
FAM3A-207ENST00000416319 SIK1P57059 783 aa25.96■■□□□ 1.75
FAM3A-207ENST00000416319 ZNF790Q6PG37 636 aa25.96■■□□□ 1.75
FAM3A-207ENST00000416319 CCNL1Q9UK58 526 aaPredicted RBP25.96■■□□□ 1.75
FAM3A-207ENST00000416319 DLG5Q8TDM6 1919 aa25.96■■□□□ 1.75
FAM3A-207ENST00000416319 CALD1Q05682 793 aaKnown RBP25.95■■□□□ 1.74
FAM3A-207ENST00000416319 SLC39A6Q13433 755 aa25.94■■□□□ 1.74
FAM3A-207ENST00000416319 TTC5Q8N0Z6 440 aa25.94■■□□□ 1.74
FAM3A-207ENST00000416319 LRRC4BQ9NT99 713 aa25.94■■□□□ 1.74
FAM3A-207ENST00000416319 SIPA1L3O60292 1781 aaPredicted RBP25.93■■□□□ 1.74
FAM3A-207ENST00000416319 LY75O60449 1722 aa25.93■■□□□ 1.74
FAM3A-207ENST00000416319 PAPPAQ13219 1627 aa25.92■■□□□ 1.74
FAM3A-207ENST00000416319 VSIG10Q8N0Z9 540 aa25.92■■□□□ 1.74
FAM3A-207ENST00000416319 RREB1Q92766 1687 aa25.92■■□□□ 1.74
FAM3A-207ENST00000416319 WWC1Q8IX03 1113 aa25.91■■□□□ 1.74
FAM3A-207ENST00000416319 PTCD1O75127 700 aaKnown RBP25.9■■□□□ 1.74
FAM3A-207ENST00000416319 SLC4A9Q96Q91 983 aa25.9■■□□□ 1.74
FAM3A-207ENST00000416319 RBM42Q9BTD8 480 aaKnown RBP25.9■■□□□ 1.74
FAM3A-207ENST00000416319 VIRMAQ69YN4 1812 aaKnown RBP25.9■■□□□ 1.74
FAM3A-207ENST00000416319 KCPQ6ZWJ8 1503 aa25.89■■□□□ 1.74
FAM3A-207ENST00000416319 ATP6V1AP38606 617 aa25.89■■□□□ 1.74
FAM3A-207ENST00000416319 ZNF831Q5JPB2 1677 aa25.88■■□□□ 1.73
FAM3A-207ENST00000416319 CHL1O00533 1208 aa25.88■■□□□ 1.73
FAM3A-207ENST00000416319 NBPF14Q5TI25 921 aa25.88■■□□□ 1.73
FAM3A-207ENST00000416319 ZNF496Q96IT1 587 aaPredicted RBP25.88■■□□□ 1.73
FAM3A-207ENST00000416319 CFAP44Q96MT7 982 aa25.88■■□□□ 1.73
FAM3A-207ENST00000416319 FMNL2Q96PY5 1086 aa25.88■■□□□ 1.73
FAM3A-207ENST00000416319 ZNF853P0CG23 659 aa25.87■■□□□ 1.73
FAM3A-207ENST00000416319 IFT57Q9NWB7 429 aa25.87■■□□□ 1.73
FAM3A-207ENST00000416319 TSPYL4Q9UJ04 414 aa25.87■■□□□ 1.73
FAM3A-207ENST00000416319 IL16Q14005 1332 aa25.87■■□□□ 1.73
FAM3A-207ENST00000416319 KCNQ3O43525 872 aa25.86■■□□□ 1.73
FAM3A-207ENST00000416319 ITPK1Q13572 414 aa25.86■■□□□ 1.73
FAM3A-207ENST00000416319 WDR63Q8IWG1 891 aa25.86■■□□□ 1.73
FAM3A-207ENST00000416319 MIS18AQ9NYP9 233 aa25.86■■□□□ 1.73
FAM3A-207ENST00000416319 HEG1Q9ULI3 1381 aa25.85■■□□□ 1.73
FAM3A-207ENST00000416319 KCNQ4P56696 695 aa25.85■■□□□ 1.73
FAM3A-207ENST00000416319 NUP188Q5SRE5 1749 aa25.85■■□□□ 1.73
FAM3A-207ENST00000416319 GNAI1P63096 354 aa25.84■■□□□ 1.73
FAM3A-207ENST00000416319 AKT1S1Q96B36 256 aa25.84■■□□□ 1.73
FAM3A-207ENST00000416319 TEX13AQ9BXU3 409 aaPredicted RBP25.84■■□□□ 1.73
FAM3A-207ENST00000416319 UBR2Q8IWV8 1755 aa25.84■■□□□ 1.73
FAM3A-207ENST00000416319 STK32BQ9NY57 414 aa25.83■■□□□ 1.73
FAM3A-207ENST00000416319 CICQ96RK0 1608 aaPredicted RBP25.83■■□□□ 1.73
FAM3A-207ENST00000416319 ZNF521Q96K83 1311 aa25.83■■□□□ 1.73
FAM3A-207ENST00000416319 EIF4A1P60842 406 aaKnown RBP25.82■■□□□ 1.72
FAM3A-207ENST00000416319 LINC00116Q8NCU8 138 aa25.82■■□□□ 1.72
FAM3A-207ENST00000416319 ANO8Q9HCE9 1232 aaPredicted RBP25.82■■□□□ 1.72
FAM3A-207ENST00000416319 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
FAM3A-207ENST00000416319 SLC15A2Q16348 729 aa25.81■■□□□ 1.72
FAM3A-207ENST00000416319 RC3H1Q5TC82 1133 aaKnown RBP25.81■■□□□ 1.72
FAM3A-207ENST00000416319 SNRPA1P09661 255 aaKnown RBP25.8■■□□□ 1.72
FAM3A-207ENST00000416319 SALL2Q9Y467 1007 aaPredicted RBP25.8■■□□□ 1.72
FAM3A-207ENST00000416319 CNTNAP4Q9C0A0 1308 aa25.8■■□□□ 1.72
FAM3A-207ENST00000416319 DNAJC10Q8IXB1 793 aa25.79■■□□□ 1.72
FAM3A-207ENST00000416319 LAS1LQ9Y4W2 734 aaKnown RBP25.79■■□□□ 1.72
FAM3A-207ENST00000416319 KDM3BQ7LBC6 1761 aa25.79■■□□□ 1.72
FAM3A-207ENST00000416319 C5P01031 1676 aa25.78■■□□□ 1.72
FAM3A-207ENST00000416319 STARD3NLO95772 234 aa25.78■■□□□ 1.72
FAM3A-207ENST00000416319 ZNF827Q17R98 1081 aa25.78■■□□□ 1.72
FAM3A-207ENST00000416319 MBIPQ9NS73 344 aa25.78■■□□□ 1.72
FAM3A-207ENST00000416319 GIGYF1O75420 1035 aaPredicted RBP25.77■■□□□ 1.72
FAM3A-207ENST00000416319 CYP19A1P11511 503 aaPredicted RBP25.77■■□□□ 1.72
FAM3A-207ENST00000416319 AK7Q96M32 723 aa25.76■■□□□ 1.71
FAM3A-207ENST00000416319 C4BP0C0L5 1744 aa25.74■■□□□ 1.71
FAM3A-207ENST00000416319 CRKLP46109 303 aaKnown RBP25.74■■□□□ 1.71
FAM3A-207ENST00000416319 TFCP2L1Q9NZI6 479 aa25.74■■□□□ 1.71
FAM3A-207ENST00000416319 TJP1Q07157 1748 aa25.74■■□□□ 1.71
FAM3A-207ENST00000416319 TAF1LQ8IZX4 1826 aa25.73■■□□□ 1.71
FAM3A-207ENST00000416319 INTS5Q6P9B9 1019 aaKnown RBP25.73■■□□□ 1.71
FAM3A-207ENST00000416319 CCDC87Q9NVE4 849 aa25.73■■□□□ 1.71
FAM3A-207ENST00000416319 HOXB7P09629 217 aa25.72■■□□□ 1.71
FAM3A-207ENST00000416319 R3HDM1Q15032 1099 aaKnown RBP25.72■■□□□ 1.71
FAM3A-207ENST00000416319 FLAD1Q8NFF5 587 aa25.72■■□□□ 1.71
FAM3A-207ENST00000416319 COL5A3P25940 1745 aaPredicted RBP25.71■■□□□ 1.71
FAM3A-207ENST00000416319 RPS6KA4O75676 772 aa25.71■■□□□ 1.71
FAM3A-207ENST00000416319 SSFA2P28290 1259 aa25.71■■□□□ 1.71
FAM3A-207ENST00000416319 GOLGA2Q08379 1002 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms