RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 BTBD11A6QL63 1104 aa10.87□□□□□ -0.67
RBM39-208ENST00000416108 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
RBM39-208ENST00000416108 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
RBM39-208ENST00000416108 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
RBM39-208ENST00000416108 MBIPQ9NS73 344 aa10.87□□□□□ -0.67
RBM39-208ENST00000416108 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 LAMB4A4D0S4 1761 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 UBR2Q8IWV8 1755 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 CHL1O00533 1208 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 ZNF853P0CG23 659 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 TRMT2AQ8IZ69 625 aaKnown RBP10.86□□□□□ -0.67
RBM39-208ENST00000416108 SLC52A2Q9HAB3 445 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 TMOD3Q9NYL9 352 aa10.86□□□□□ -0.67
RBM39-208ENST00000416108 CT47B1P0C2W7 299 aaPredicted RBP10.85□□□□□ -0.67
RBM39-208ENST00000416108 RXRBP28702 533 aa10.85□□□□□ -0.67
RBM39-208ENST00000416108 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
RBM39-208ENST00000416108 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
RBM39-208ENST00000416108 TTC5Q8N0Z6 440 aa10.85□□□□□ -0.67
RBM39-208ENST00000416108 BTAF1O14981 1849 aa10.84□□□□□ -0.67
RBM39-208ENST00000416108 EXOSC9Q06265 439 aaKnown RBP10.84□□□□□ -0.67
RBM39-208ENST00000416108 MARCH10Q8NA82 808 aaPredicted RBP10.84□□□□□ -0.67
RBM39-208ENST00000416108 NFATC2IPQ8NCF5 419 aa10.84□□□□□ -0.67
RBM39-208ENST00000416108 SYTL4Q96C24 671 aaPredicted RBP10.84□□□□□ -0.67
RBM39-208ENST00000416108 MIS18AQ9NYP9 233 aa10.84□□□□□ -0.67
RBM39-208ENST00000416108 RCAN3Q9UKA8 241 aa10.84□□□□□ -0.67
RBM39-208ENST00000416108 C5P01031 1676 aa10.83□□□□□ -0.68
RBM39-208ENST00000416108 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
RBM39-208ENST00000416108 TWISTNBQ3B726 338 aaPredicted RBP10.82□□□□□ -0.68
RBM39-208ENST00000416108 CHMP4AQ9BY43 222 aa10.82□□□□□ -0.68
RBM39-208ENST00000416108 SOS1Q07889 1333 aaPredicted RBP10.82□□□□□ -0.68
RBM39-208ENST00000416108 ZNF790Q6PG37 636 aa10.81□□□□□ -0.68
RBM39-208ENST00000416108 KRT27Q7Z3Y8 459 aa10.81□□□□□ -0.68
RBM39-208ENST00000416108 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.81□□□□□ -0.68
RBM39-208ENST00000416108 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
RBM39-208ENST00000416108 ACSBG1Q96GR2 724 aa10.81□□□□□ -0.68
RBM39-208ENST00000416108 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
RBM39-208ENST00000416108 NEFLP07196 543 aa10.8□□□□□ -0.68
RBM39-208ENST00000416108 CANXP27824 592 aaKnown RBP10.8□□□□□ -0.68
RBM39-208ENST00000416108 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
RBM39-208ENST00000416108 SLC39A6Q13433 755 aa10.8□□□□□ -0.68
RBM39-208ENST00000416108 FMNL2Q96PY5 1086 aa10.8□□□□□ -0.68
RBM39-208ENST00000416108 BCL9O00512 1426 aa10.8□□□□□ -0.68
RBM39-208ENST00000416108 RGS12O14924 1447 aa10.79□□□□□ -0.68
RBM39-208ENST00000416108 HOXB7P09629 217 aa10.79□□□□□ -0.68
RBM39-208ENST00000416108 EIF4A1P60842 406 aaKnown RBP10.79□□□□□ -0.68
RBM39-208ENST00000416108 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
RBM39-208ENST00000416108 STK31Q9BXU1 1019 aa10.79□□□□□ -0.68
RBM39-208ENST00000416108 RGS17Q9UGC6 210 aaPredicted RBP10.79□□□□□ -0.68
RBM39-208ENST00000416108 KCNQ3O43525 872 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 VAMP4O75379 141 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 ALDH1L2Q3SY69 923 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 POTEAQ6S8J7 498 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 FAM196AQ6ZSG2 479 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 PIGBQ92521 554 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
RBM39-208ENST00000416108 SMC4Q9NTJ3 1288 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
RBM39-208ENST00000416108 KCPQ6ZWJ8 1503 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 LY75O60449 1722 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 TJP1Q07157 1748 aa10.78□□□□□ -0.68
RBM39-208ENST00000416108 ZNF831Q5JPB2 1677 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
RBM39-208ENST00000416108 KRT24Q2M2I5 525 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 HDGFL1Q5TGJ6 251 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 CCDC30Q5VVM6 783 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
RBM39-208ENST00000416108 KIF16BQ96L93 1317 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.69
RBM39-208ENST00000416108 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
RBM39-208ENST00000416108 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
RBM39-208ENST00000416108 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
RBM39-208ENST00000416108 ZNF496Q96IT1 587 aaPredicted RBP10.76□□□□□ -0.69
RBM39-208ENST00000416108 BCL2L13Q9BXK5 485 aa10.76□□□□□ -0.69
RBM39-208ENST00000416108 ATG3Q9NT62 314 aa10.76□□□□□ -0.69
RBM39-208ENST00000416108 TAF1LQ8IZX4 1826 aa10.76□□□□□ -0.69
RBM39-208ENST00000416108 COL5A3P25940 1745 aaPredicted RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 IPO8O15397 1037 aaKnown RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 PTCD1O75127 700 aaKnown RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 GIGYF1O75420 1035 aaPredicted RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 RRP1P56182 461 aaKnown RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
RBM39-208ENST00000416108 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 TEX13AQ9BXU3 409 aaPredicted RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 ASAP1Q9ULH1 1129 aa10.75□□□□□ -0.69
RBM39-208ENST00000416108 PALLDQ8WX93 1383 aa10.75□□□□□ -0.69
RBM39-208ENST00000416108 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
RBM39-208ENST00000416108 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
RBM39-208ENST00000416108 KCNQ2O43526 872 aa10.74□□□□□ -0.69
RBM39-208ENST00000416108 BCAR3O75815 825 aa10.74□□□□□ -0.69
RBM39-208ENST00000416108 ZKSCAN2Q63HK3 967 aa10.74□□□□□ -0.69
RBM39-208ENST00000416108 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
RBM39-208ENST00000416108 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
RBM39-208ENST00000416108 N4BP2Q86UW6 1770 aaPredicted RBP10.73□□□□□ -0.69
RBM39-208ENST00000416108 MS4A1P11836 297 aa10.73□□□□□ -0.69
RBM39-208ENST00000416108 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
RBM39-208ENST00000416108 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
RBM39-208ENST00000416108 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
RBM39-208ENST00000416108 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms