RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DOT1LQ8TEK3 1739 aa18.89■□□□□ 0.61
SGCE-202ENST00000415788 TOGARAM1Q9Y4F4 1720 aa18.89■□□□□ 0.61
SGCE-202ENST00000415788 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
SGCE-202ENST00000415788 WDR63Q8IWG1 891 aa18.88■□□□□ 0.61
SGCE-202ENST00000415788 NFATC2IPQ8NCF5 419 aa18.88■□□□□ 0.61
SGCE-202ENST00000415788 THUMPD2Q9BTF0 503 aaKnown RBP18.88■□□□□ 0.61
SGCE-202ENST00000415788 NHSQ6T4R5 1651 aa18.88■□□□□ 0.61
SGCE-202ENST00000415788 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
SGCE-202ENST00000415788 IL16Q14005 1332 aa18.87■□□□□ 0.61
SGCE-202ENST00000415788 KCNQ2O43526 872 aa18.87■□□□□ 0.61
SGCE-202ENST00000415788 PIGBQ92521 554 aa18.87■□□□□ 0.61
SGCE-202ENST00000415788 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
SGCE-202ENST00000415788 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
SGCE-202ENST00000415788 TRIM37O94972 964 aa18.86■□□□□ 0.61
SGCE-202ENST00000415788 MSH5O43196 834 aa18.85■□□□□ 0.61
SGCE-202ENST00000415788 BTBD11A6QL63 1104 aa18.84■□□□□ 0.61
SGCE-202ENST00000415788 CFAP44Q96MT7 982 aa18.84■□□□□ 0.61
SGCE-202ENST00000415788 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
SGCE-202ENST00000415788 ZBED9Q6R2W3 1325 aa18.84■□□□□ 0.61
SGCE-202ENST00000415788 GNAI1P63096 354 aa18.84■□□□□ 0.61
SGCE-202ENST00000415788 CCDC125Q86Z20 511 aa18.84■□□□□ 0.61
SGCE-202ENST00000415788 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
SGCE-202ENST00000415788 SBF2Q86WG5 1849 aa18.83■□□□□ 0.61
SGCE-202ENST00000415788 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
SGCE-202ENST00000415788 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
SGCE-202ENST00000415788 ITGB4P16144 1822 aa18.82■□□□□ 0.6
SGCE-202ENST00000415788 CHL1O00533 1208 aa18.82■□□□□ 0.6
SGCE-202ENST00000415788 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
SGCE-202ENST00000415788 SF3B2Q13435 895 aaKnown RBP18.82■□□□□ 0.6
SGCE-202ENST00000415788 VIRMAQ69YN4 1812 aaKnown RBP18.81■□□□□ 0.6
SGCE-202ENST00000415788 SIPA1L3O60292 1781 aaPredicted RBP18.81■□□□□ 0.6
SGCE-202ENST00000415788 ZNF790Q6PG37 636 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 PPP4R2Q9NY27 417 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
SGCE-202ENST00000415788 LAS1LQ9Y4W2 734 aaKnown RBP18.8■□□□□ 0.6
SGCE-202ENST00000415788 ASAP1Q9ULH1 1129 aa18.8■□□□□ 0.6
SGCE-202ENST00000415788 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
SGCE-202ENST00000415788 E9PSI1 815 aa18.79■□□□□ 0.6
SGCE-202ENST00000415788 PLSCR1O15162 318 aa18.79■□□□□ 0.6
SGCE-202ENST00000415788 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
SGCE-202ENST00000415788 APBA3O96018 575 aa18.78■□□□□ 0.6
SGCE-202ENST00000415788 SLC39A6Q13433 755 aa18.78■□□□□ 0.6
SGCE-202ENST00000415788 BTAF1O14981 1849 aa18.78■□□□□ 0.6
SGCE-202ENST00000415788 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
SGCE-202ENST00000415788 MIS18AQ9NYP9 233 aa18.77■□□□□ 0.6
SGCE-202ENST00000415788 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.6
SGCE-202ENST00000415788 PAPPAQ13219 1627 aa18.77■□□□□ 0.6
SGCE-202ENST00000415788 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
SGCE-202ENST00000415788 TNS1Q9HBL0 1735 aaKnown RBP18.76■□□□□ 0.59
SGCE-202ENST00000415788 HMGB2P26583 209 aaKnown RBP18.75■□□□□ 0.59
SGCE-202ENST00000415788 BAG6P46379 1132 aa18.75■□□□□ 0.59
SGCE-202ENST00000415788 SLFN5Q08AF3 891 aa18.75■□□□□ 0.59
SGCE-202ENST00000415788 UPF1Q92900 1129 aaKnown RBP eCLIP18.75■□□□□ 0.59
SGCE-202ENST00000415788 KDM3BQ7LBC6 1761 aa18.74■□□□□ 0.59
SGCE-202ENST00000415788 EIF4A1P60842 406 aaKnown RBP18.74■□□□□ 0.59
SGCE-202ENST00000415788 VSIG10Q8N0Z9 540 aa18.74■□□□□ 0.59
SGCE-202ENST00000415788 ZNF496Q96IT1 587 aaPredicted RBP18.74■□□□□ 0.59
SGCE-202ENST00000415788 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
SGCE-202ENST00000415788 LOC102724428A0A0B4J2F2 783 aa18.73■□□□□ 0.59
SGCE-202ENST00000415788 KCNQ3O43525 872 aa18.73■□□□□ 0.59
SGCE-202ENST00000415788 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
SGCE-202ENST00000415788 SIK1P57059 783 aa18.73■□□□□ 0.59
SGCE-202ENST00000415788 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
SGCE-202ENST00000415788 RBM42Q9BTD8 480 aaKnown RBP18.73■□□□□ 0.59
SGCE-202ENST00000415788 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
SGCE-202ENST00000415788 HEG1Q9ULI3 1381 aa18.72■□□□□ 0.59
SGCE-202ENST00000415788 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
SGCE-202ENST00000415788 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
SGCE-202ENST00000415788 CDCA7LQ96GN5 454 aa18.72■□□□□ 0.59
SGCE-202ENST00000415788 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
SGCE-202ENST00000415788 RGPD3A6NKT7 1758 aaPredicted RBP18.71■□□□□ 0.59
SGCE-202ENST00000415788 RGPD4Q7Z3J3 1758 aa18.71■□□□□ 0.59
SGCE-202ENST00000415788 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
SGCE-202ENST00000415788 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
SGCE-202ENST00000415788 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
SGCE-202ENST00000415788 CCNL1Q9UK58 526 aaPredicted RBP18.71■□□□□ 0.59
SGCE-202ENST00000415788 HOXB7P09629 217 aa18.7■□□□□ 0.58
SGCE-202ENST00000415788 ATP6V1AP38606 617 aa18.7■□□□□ 0.58
SGCE-202ENST00000415788 TXNRD1Q16881 649 aa18.7■□□□□ 0.58
SGCE-202ENST00000415788 CAMKK2Q96RR4 588 aa18.7■□□□□ 0.58
SGCE-202ENST00000415788 EP400Q96L91 3159 aa18.7■□□□□ 0.58
SGCE-202ENST00000415788 GIGYF1O75420 1035 aaPredicted RBP18.69■□□□□ 0.58
SGCE-202ENST00000415788 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
SGCE-202ENST00000415788 LY75O60449 1722 aa18.69■□□□□ 0.58
SGCE-202ENST00000415788 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
SGCE-202ENST00000415788 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
SGCE-202ENST00000415788 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
SGCE-202ENST00000415788 SLC4A9Q96Q91 983 aa18.68■□□□□ 0.58
SGCE-202ENST00000415788 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
SGCE-202ENST00000415788 DEFB132Q7Z7B7 95 aa18.67■□□□□ 0.58
SGCE-202ENST00000415788 PROM2Q8N271 834 aa18.67■□□□□ 0.58
SGCE-202ENST00000415788 STARD3NLO95772 234 aa18.66■□□□□ 0.58
SGCE-202ENST00000415788 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
SGCE-202ENST00000415788 EZH2Q15910 746 aaKnown RBP18.66■□□□□ 0.58
SGCE-202ENST00000415788 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
SGCE-202ENST00000415788 KRT24Q2M2I5 525 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms