RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 PKD1L3Q7Z443 1732 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 HTATSF1O43719 755 aaKnown RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 GCP02774 474 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 PRKCSHP14314 528 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 C14orf37Q86TY3 774 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 STK24Q9Y6E0 443 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 ABCC4O15439 1325 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 MAP3K5Q99683 1374 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 CHRM1P11229 460 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 ARHGAP45Q92619 1136 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 TAOK2Q9UL54 1235 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 SCN11AQ9UI33 1791 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 CANXP27824 592 aaKnown RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 KRT24Q2M2I5 525 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 TWISTNBQ3B726 338 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 TMEM57Q8N5G2 664 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 GAS2L2Q8NHY3 880 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 DDX17Q92841 729 aaKnown RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 AXIN2Q9Y2T1 843 aa5.67□□□□□ -1.5
GTDC1-208ENST00000415569 LAS1LQ9Y4W2 734 aaKnown RBP5.67□□□□□ -1.5
GTDC1-208ENST00000415569 OVOS2A0A0G2JMS6 1433 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 GTPBP6O43824 516 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-208ENST00000415569 USHBP1Q8N6Y0 703 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 IL17REQ8NFR9 667 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 ZBTB40Q9NUA8 1239 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 FARP1Q9Y4F1 1045 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-208ENST00000415569 ATF3P18847 181 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 CADPS2Q86UW7 1296 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 BACH2Q9BYV9 841 aa5.66□□□□□ -1.5
GTDC1-208ENST00000415569 ZNF335Q9H4Z2 1342 aaPredicted RBP5.65□□□□□ -1.5
GTDC1-208ENST00000415569 SHANK3Q9BYB0 1731 aa5.65□□□□□ -1.5
GTDC1-208ENST00000415569 PARP4Q9UKK3 1724 aaKnown RBP5.65□□□□□ -1.5
GTDC1-208ENST00000415569 LRRC59Q96AG4 307 aaKnown RBP5.65□□□□□ -1.5
GTDC1-208ENST00000415569 SPATA31A3Q5VYP0 1347 aa5.65□□□□□ -1.5
GTDC1-208ENST00000415569 CPDO75976 1380 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 GNAT3A8MTJ3 354 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 PRKAR2AP13861 404 aaKnown RBP5.65□□□□□ -1.51
GTDC1-208ENST00000415569 PDE4AP27815 886 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 HDAC1Q13547 482 aaPredicted RBP5.65□□□□□ -1.51
GTDC1-208ENST00000415569 BRINP3Q76B58 766 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 LTV1Q96GA3 475 aaPredicted RBP5.65□□□□□ -1.51
GTDC1-208ENST00000415569 BABAM1Q9NWV8 329 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 DDX19BQ9UMR2 479 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 GLI3P10071 1580 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 ERBB3P21860 1342 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 NPHP3Q7Z494 1330 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 PLEKHG2Q9H7P9 1386 aa5.65□□□□□ -1.51
GTDC1-208ENST00000415569 ELL2O00472 640 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-208ENST00000415569 ZBTB7BO15156 539 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-208ENST00000415569 IPO8O15397 1037 aaKnown RBP5.64□□□□□ -1.51
GTDC1-208ENST00000415569 FTSJ3Q8IY81 847 aaKnown RBP5.64□□□□□ -1.51
GTDC1-208ENST00000415569 ANKRD24Q8TF21 1146 aa5.64□□□□□ -1.51
GTDC1-208ENST00000415569 MIS18AQ9NYP9 233 aa5.64□□□□□ -1.51
GTDC1-208ENST00000415569 SOS2Q07890 1332 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-208ENST00000415569 C8orf34Q49A92 452 aa5.64□□□□□ -1.51
GTDC1-208ENST00000415569 ARXQ96QS3 562 aa5.64□□□□□ -1.51
GTDC1-208ENST00000415569 MRC1P22897 1456 aa5.64□□□□□ -1.51
GTDC1-208ENST00000415569 MEGF6O75095 1541 aa5.64□□□□□ -1.51
GTDC1-208ENST00000415569 C5P01031 1676 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 ITPRIPQ8IWB1 547 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 ATP10DQ9P241 1426 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 LTBP4Q8N2S1 1624 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 INTS3Q68E01 1043 aaKnown RBP5.63□□□□□ -1.51
GTDC1-208ENST00000415569 SMC5Q8IY18 1101 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 TSPYL4Q9UJ04 414 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 HEG1Q9ULI3 1381 aa5.63□□□□□ -1.51
GTDC1-208ENST00000415569 COL22A1Q8NFW1 1626 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-208ENST00000415569 SOS1Q07889 1333 aaPredicted RBP5.62□□□□□ -1.51
GTDC1-208ENST00000415569 RTF1Q92541 710 aaKnown RBP5.62□□□□□ -1.51
GTDC1-208ENST00000415569 LGR6Q9HBX8 967 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 PAPPAQ13219 1627 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 KDM6AO15550 1401 aaPredicted RBP5.62□□□□□ -1.51
GTDC1-208ENST00000415569 PTPRCP08575 1304 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 TAF7Q15545 349 aaPredicted RBP5.62□□□□□ -1.51
GTDC1-208ENST00000415569 AKAP4Q5JQC9 854 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 SIRT2Q8IXJ6 389 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 API5Q9BZZ5 524 aaKnown RBP5.62□□□□□ -1.51
GTDC1-208ENST00000415569 PCDHB8Q9UN66 801 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 PDZRN3Q9UPQ7 1066 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 PCDHB13Q9Y5F0 798 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 AHDC1Q5TGY3 1603 aaPredicted RBP5.62□□□□□ -1.51
GTDC1-208ENST00000415569 PXDNLA1KZ92 1463 aa5.62□□□□□ -1.51
GTDC1-208ENST00000415569 ZC3H6P61129 1189 aaKnown RBP5.61□□□□□ -1.51
GTDC1-208ENST00000415569 AMOTQ4VCS5 1084 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 G2E3Q7L622 706 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 CABLES1Q8TDN4 633 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 RWDD1Q9H446 243 aaPredicted RBP5.61□□□□□ -1.51
GTDC1-208ENST00000415569 SLAIN2Q9P270 581 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 ROBO1Q9Y6N7 1651 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 COL16A1Q07092 1604 aaPredicted RBP5.61□□□□□ -1.51
GTDC1-208ENST00000415569 TUBGCP6Q96RT7 1819 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 UBR2Q8IWV8 1755 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 SGIP1Q9BQI5 828 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 COL5A2P05997 1499 aaPredicted RBP5.61□□□□□ -1.51
GTDC1-208ENST00000415569 WNK3Q9BYP7 1800 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 SOCS7O14512 581 aa5.61□□□□□ -1.51
GTDC1-208ENST00000415569 RNMTO43148 476 aaKnown RBP5.61□□□□□ -1.51
GTDC1-208ENST00000415569 EIF4A1P60842 406 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms