RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 RNF216Q9NWF9 866 aaPredicted RBP9.4□□□□□ -0.9
SIK3-203ENST00000415541 SBNO2Q9Y2G9 1366 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 NEURL4Q96JN8 1562 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 TULP2O00295 520 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 KRT28Q7Z3Y7 464 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.9
SIK3-203ENST00000415541 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
SIK3-203ENST00000415541 KDM5AP29375 1690 aaKnown RBP9.4□□□□□ -0.9
SIK3-203ENST00000415541 IFT172Q9UG01 1749 aa9.4□□□□□ -0.91
SIK3-203ENST00000415541 SYCE3A1L190 88 aa9.4□□□□□ -0.91
SIK3-203ENST00000415541 ERICH4A6NGS2 130 aa9.4□□□□□ -0.91
SIK3-203ENST00000415541 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.91
SIK3-203ENST00000415541 ZNF428Q96B54 188 aa9.4□□□□□ -0.91
SIK3-203ENST00000415541 POLR3AO14802 1390 aaPredicted RBP9.4□□□□□ -0.91
SIK3-203ENST00000415541 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
SIK3-203ENST00000415541 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 NPC1L1Q9UHC9 1359 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
SIK3-203ENST00000415541 GTF2A1P52655 376 aaPredicted RBP9.39□□□□□ -0.91
SIK3-203ENST00000415541 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
SIK3-203ENST00000415541 LMBRD1Q9NUN5 540 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 ROBO2Q9HCK4 1378 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 SPTLC3Q9NUV7 552 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
SIK3-203ENST00000415541 A2ML1A8K2U0 1454 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 EIF4A2Q14240 407 aaKnown RBP9.38□□□□□ -0.91
SIK3-203ENST00000415541 JARID2Q92833 1246 aaPredicted RBP9.38□□□□□ -0.91
SIK3-203ENST00000415541 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
SIK3-203ENST00000415541 MORC2Q9Y6X9 1032 aaPredicted RBP9.38□□□□□ -0.91
SIK3-203ENST00000415541 MROH2AA6NES4 1674 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 ANKRD45Q5TZF3 282 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 CABLES1Q8TDN4 633 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 PRDM11Q9NQV5 511 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 CHRNA2Q15822 529 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 TEX35Q5T0J7 233 aa9.38□□□□□ -0.91
SIK3-203ENST00000415541 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
SIK3-203ENST00000415541 SLC4A2P04920 1241 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 RASSF4Q9H2L5 321 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 MAP3K19Q56UN5 1328 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 PRR36Q9H6K5 1346 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 CTIFO43310 598 aaKnown RBP9.37□□□□□ -0.91
SIK3-203ENST00000415541 API5Q9BZZ5 524 aaKnown RBP9.37□□□□□ -0.91
SIK3-203ENST00000415541 CTNNA3Q9UI47 895 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
SIK3-203ENST00000415541 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
SIK3-203ENST00000415541 ATF7IPQ6VMQ6 1270 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 SYTL4Q96C24 671 aaPredicted RBP9.36□□□□□ -0.91
SIK3-203ENST00000415541 MYCBPQ99417 103 aaPredicted RBP9.36□□□□□ -0.91
SIK3-203ENST00000415541 NRXN1Q9ULB1 1477 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 AIMP1Q12904 312 aaKnown RBP9.36□□□□□ -0.91
SIK3-203ENST00000415541 KCNH5Q8NCM2 988 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
SIK3-203ENST00000415541 TNNQ9UQP3 1299 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 LMTK2Q8IWU2 1503 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 CWC15Q9P013 229 aaKnown RBP9.36□□□□□ -0.91
SIK3-203ENST00000415541 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
SIK3-203ENST00000415541 HTATSF1O43719 755 aaKnown RBP9.35□□□□□ -0.91
SIK3-203ENST00000415541 FEZ2Q9UHY8 353 aaPredicted RBP9.35□□□□□ -0.91
SIK3-203ENST00000415541 FRMPD1Q5SYB0 1578 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 PIP4K2BP78356 416 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 TOM1L2Q6ZVM7 507 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 ADGRB3O60242 1522 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 CAPN2P17655 700 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 RABEP1Q15276 862 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 TTC5Q8N0Z6 440 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 DDX54Q8TDD1 881 aaKnown RBP9.35□□□□□ -0.91
SIK3-203ENST00000415541 LRRC59Q96AG4 307 aaKnown RBP9.35□□□□□ -0.91
SIK3-203ENST00000415541 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
SIK3-203ENST00000415541 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 CCDC112Q8NEF3 446 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 TTC12Q9H892 705 aaPredicted RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 RSPH14Q9UHP6 348 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 TTC21AQ8NDW8 1320 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 SMTNL1A8MU46 457 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 HSP90B1P14625 803 aaKnown RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 TMEM57Q8N5G2 664 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 ZNF397Q8NF99 534 aaPredicted RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 NOL10Q9BSC4 688 aaKnown RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 PAXBP1Q9Y5B6 917 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 ZC3H13Q5T200 1668 aaKnown RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 PLEKHG3A1L390 1219 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 GPS2Q13227 327 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 KRT24Q2M2I5 525 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
SIK3-203ENST00000415541 EYA1Q99502 592 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 BRMS1Q9HCU9 246 aa9.34□□□□□ -0.91
SIK3-203ENST00000415541 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms