RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 SPAG9O60271 1321 aaKnown RBP12.57□□□□□ -0.4
TRA2B-204ENST00000414862 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-204ENST00000414862 SAMD9LQ8IVG5 1584 aa12.56□□□□□ -0.4
TRA2B-204ENST00000414862 RGS20O76081 388 aa12.56□□□□□ -0.4
TRA2B-204ENST00000414862 SOX11P35716 441 aa12.56□□□□□ -0.4
TRA2B-204ENST00000414862 FOXC1Q12948 553 aa12.55□□□□□ -0.4
TRA2B-204ENST00000414862 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
TRA2B-204ENST00000414862 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
TRA2B-204ENST00000414862 SYCP2Q9BX26 1530 aa12.55□□□□□ -0.4
TRA2B-204ENST00000414862 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
TRA2B-204ENST00000414862 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
TRA2B-204ENST00000414862 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
TRA2B-204ENST00000414862 MRGPRX2Q96LB1 330 aa12.54□□□□□ -0.4
TRA2B-204ENST00000414862 ALG2Q9H553 416 aa12.54□□□□□ -0.4
TRA2B-204ENST00000414862 ATP7AQ04656 1500 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 HSPA1LP34931 641 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 MCCD1P59942 119 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-204ENST00000414862 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 TRMT44Q8IYL2 757 aaKnown RBP12.53□□□□□ -0.4
TRA2B-204ENST00000414862 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 GLMNQ92990 594 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 SLC10A4Q96EP9 437 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 CALR3Q96L12 384 aaKnown RBP12.53□□□□□ -0.4
TRA2B-204ENST00000414862 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 CASKIN1Q8WXD9 1431 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 A2MP01023 1474 aa12.53□□□□□ -0.4
TRA2B-204ENST00000414862 CPS1P31327 1500 aa12.52□□□□□ -0.4
TRA2B-204ENST00000414862 CLTCQ00610 1675 aaKnown RBP12.52□□□□□ -0.4
TRA2B-204ENST00000414862 TOM1O60784 492 aa12.52□□□□□ -0.41
TRA2B-204ENST00000414862 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.41
TRA2B-204ENST00000414862 SIAH2O43255 324 aa12.51□□□□□ -0.41
TRA2B-204ENST00000414862 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
TRA2B-204ENST00000414862 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
TRA2B-204ENST00000414862 LRRIQ1Q96JM4 1722 aa12.51□□□□□ -0.41
TRA2B-204ENST00000414862 GGT6Q6P531 493 aa12.5□□□□□ -0.41
TRA2B-204ENST00000414862 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
TRA2B-204ENST00000414862 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
TRA2B-204ENST00000414862 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
TRA2B-204ENST00000414862 FYCO1Q9BQS8 1478 aa12.49□□□□□ -0.41
TRA2B-204ENST00000414862 ARID5BQ14865 1188 aa12.49□□□□□ -0.41
TRA2B-204ENST00000414862 C1orf115Q9H7X2 142 aa12.49□□□□□ -0.41
TRA2B-204ENST00000414862 CDV3Q9UKY7 258 aaKnown RBP12.49□□□□□ -0.41
TRA2B-204ENST00000414862 GDF9O60383 454 aa12.48□□□□□ -0.41
TRA2B-204ENST00000414862 CEP126Q9P2H0 1117 aa12.48□□□□□ -0.41
TRA2B-204ENST00000414862 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
TRA2B-204ENST00000414862 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
TRA2B-204ENST00000414862 SHANK2Q9UPX8 1470 aa12.47□□□□□ -0.41
TRA2B-204ENST00000414862 TNFRSF10AO00220 468 aa12.47□□□□□ -0.41
TRA2B-204ENST00000414862 HNRNPMP52272 730 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRA2B-204ENST00000414862 VASH1Q7L8A9 365 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-204ENST00000414862 MPNDQ8N594 471 aa12.47□□□□□ -0.41
TRA2B-204ENST00000414862 CDK15Q96Q40 435 aa12.47□□□□□ -0.41
TRA2B-204ENST00000414862 MAP4K5Q9Y4K4 846 aa12.47□□□□□ -0.41
TRA2B-204ENST00000414862 NBPF20Q3BBV1 942 aa12.46□□□□□ -0.41
TRA2B-204ENST00000414862 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
TRA2B-204ENST00000414862 TNRQ92752 1358 aa12.45□□□□□ -0.42
TRA2B-204ENST00000414862 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
TRA2B-204ENST00000414862 TRIM67Q6ZTA4 783 aa12.45□□□□□ -0.42
TRA2B-204ENST00000414862 KCTD15Q96SI1 283 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-204ENST00000414862 CCNB3Q8WWL7 1395 aa12.44□□□□□ -0.42
TRA2B-204ENST00000414862 NEURL4Q96JN8 1562 aa12.44□□□□□ -0.42
TRA2B-204ENST00000414862 GIGYF1O75420 1035 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-204ENST00000414862 CYP4X1Q8N118 509 aa12.44□□□□□ -0.42
TRA2B-204ENST00000414862 SNIP1Q8TAD8 396 aaKnown RBP12.44□□□□□ -0.42
TRA2B-204ENST00000414862 POLR1AO95602 1720 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-204ENST00000414862 ADGBQ8N7X0 1667 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 PRR20EP86478 221 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 PRR20CP86479 221 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 PRR20DP86480 221 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 PRR20BP86481 221 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 PRR20AP86496 221 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
TRA2B-204ENST00000414862 FAM135AQ9P2D6 1515 aa12.42□□□□□ -0.42
TRA2B-204ENST00000414862 PZPP20742 1482 aa12.42□□□□□ -0.42
TRA2B-204ENST00000414862 TTC24A2A3L6 582 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-204ENST00000414862 GRM5P41594 1212 aa12.42□□□□□ -0.42
TRA2B-204ENST00000414862 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
TRA2B-204ENST00000414862 ESPNB1AK53 854 aa12.41□□□□□ -0.42
TRA2B-204ENST00000414862 ADH1CP00326 375 aa12.41□□□□□ -0.42
TRA2B-204ENST00000414862 ANKLE2Q86XL3 938 aa12.41□□□□□ -0.42
TRA2B-204ENST00000414862 CCDC82Q8N4S0 544 aa12.41□□□□□ -0.42
TRA2B-204ENST00000414862 CCDC97Q96F63 343 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-204ENST00000414862 VWDEQ8N2E2 1590 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 NPHP4O75161 1426 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-204ENST00000414862 FSHRP23945 695 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 PHTF2Q8N3S3 785 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 UCN2Q96RP3 112 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 TOR4AQ9NXH8 423 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
TRA2B-204ENST00000414862 NLRP1Q9C000 1473 aa12.4□□□□□ -0.43
TRA2B-204ENST00000414862 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
TRA2B-204ENST00000414862 RAB15P59190 212 aa12.39□□□□□ -0.43
TRA2B-204ENST00000414862 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
TRA2B-204ENST00000414862 RNF20Q5VTR2 975 aa12.39□□□□□ -0.43
TRA2B-204ENST00000414862 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
TRA2B-204ENST00000414862 THEMISQ8N1K5 641 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms