RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
ATG4C-204ENST00000414558 GTF2IP78347 998 aa11.25□□□□□ -0.61
ATG4C-204ENST00000414558 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
ATG4C-204ENST00000414558 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
ATG4C-204ENST00000414558 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
ATG4C-204ENST00000414558 PSME1Q06323 249 aa11.24□□□□□ -0.61
ATG4C-204ENST00000414558 VWA5B2Q8N398 1253 aa11.24□□□□□ -0.61
ATG4C-204ENST00000414558 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
ATG4C-204ENST00000414558 CALR3Q96L12 384 aaKnown RBP11.24□□□□□ -0.61
ATG4C-204ENST00000414558 RHBDD1Q8TEB9 315 aa11.23□□□□□ -0.61
ATG4C-204ENST00000414558 TMEM229AB2RXF0 380 aa11.22□□□□□ -0.61
ATG4C-204ENST00000414558 H7C1W4 665 aa11.22□□□□□ -0.61
ATG4C-204ENST00000414558 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
ATG4C-204ENST00000414558 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
ATG4C-204ENST00000414558 GPR161Q8N6U8 529 aaKnown RBP11.22□□□□□ -0.61
ATG4C-204ENST00000414558 GAS2L1Q99501 681 aaPredicted RBP11.22□□□□□ -0.61
ATG4C-204ENST00000414558 ATP1A2P50993 1020 aa11.21□□□□□ -0.61
ATG4C-204ENST00000414558 SMTNP53814 917 aa11.21□□□□□ -0.61
ATG4C-204ENST00000414558 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.61
ATG4C-204ENST00000414558 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
ATG4C-204ENST00000414558 BACH1O14867 736 aa11.2□□□□□ -0.62
ATG4C-204ENST00000414558 F11P03951 625 aa11.2□□□□□ -0.62
ATG4C-204ENST00000414558 C4orf17Q53FE4 359 aa11.2□□□□□ -0.62
ATG4C-204ENST00000414558 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
ATG4C-204ENST00000414558 CUEDC1Q9NWM3 386 aaPredicted RBP11.2□□□□□ -0.62
ATG4C-204ENST00000414558 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
ATG4C-204ENST00000414558 PHKA2P46019 1235 aa11.19□□□□□ -0.62
ATG4C-204ENST00000414558 COL25A1Q9BXS0 654 aaPredicted RBP11.19□□□□□ -0.62
ATG4C-204ENST00000414558 STK17AQ9UEE5 414 aa11.19□□□□□ -0.62
ATG4C-204ENST00000414558 FOXR1Q6PIV2 292 aa11.18□□□□□ -0.62
ATG4C-204ENST00000414558 ZSCAN1Q8NBB4 408 aa11.18□□□□□ -0.62
ATG4C-204ENST00000414558 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
ATG4C-204ENST00000414558 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
ATG4C-204ENST00000414558 MTFR1Q15390 333 aa11.17□□□□□ -0.62
ATG4C-204ENST00000414558 NIFKQ9BYG3 293 aaKnown RBP11.17□□□□□ -0.62
ATG4C-204ENST00000414558 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
ATG4C-204ENST00000414558 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
ATG4C-204ENST00000414558 PALM3A6NDB9 673 aaPredicted RBP11.16□□□□□ -0.62
ATG4C-204ENST00000414558 A6NJY4 79 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 KRT76Q01546 638 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 DBN1Q16643 649 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 CNTNAP3Q9BZ76 1288 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 PPP1R12CQ9BZL4 782 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
ATG4C-204ENST00000414558 ZNF358Q9NW07 568 aa11.16□□□□□ -0.62
ATG4C-204ENST00000414558 CDK2AP1O14519 115 aa11.15□□□□□ -0.62
ATG4C-204ENST00000414558 PLA2G4AP47712 749 aa11.15□□□□□ -0.62
ATG4C-204ENST00000414558 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
ATG4C-204ENST00000414558 TPCN2Q8NHX9 752 aa11.15□□□□□ -0.62
ATG4C-204ENST00000414558 FAM181BA6NEQ2 426 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 CLDN10P78369 228 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 RNFT1Q5M7Z0 435 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 CCDC102BQ68D86 513 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 NUCKS1Q9H1E3 243 aaKnown RBP11.14□□□□□ -0.63
ATG4C-204ENST00000414558 GPAMQ9HCL2 828 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
ATG4C-204ENST00000414558 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
ATG4C-204ENST00000414558 CSB-PGBD3P0DP91 1061 aa11.13□□□□□ -0.63
ATG4C-204ENST00000414558 LORP23490 312 aaPredicted RBP11.13□□□□□ -0.63
ATG4C-204ENST00000414558 PGBD3Q8N328 593 aa11.13□□□□□ -0.63
ATG4C-204ENST00000414558 TRERF1Q96PN7 1200 aa11.13□□□□□ -0.63
ATG4C-204ENST00000414558 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
ATG4C-204ENST00000414558 KIAA1024Q9UPX6 916 aa11.13□□□□□ -0.63
ATG4C-204ENST00000414558 ZBTB7BO15156 539 aaPredicted RBP11.12□□□□□ -0.63
ATG4C-204ENST00000414558 MSX1P28360 303 aa11.12□□□□□ -0.63
ATG4C-204ENST00000414558 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
ATG4C-204ENST00000414558 GTPBP3Q969Y2 492 aaKnown RBP11.12□□□□□ -0.63
ATG4C-204ENST00000414558 RBM19Q9Y4C8 960 aaKnown RBP11.12□□□□□ -0.63
ATG4C-204ENST00000414558 C1orf216Q8TAB5 229 aa11.11□□□□□ -0.63
ATG4C-204ENST00000414558 SCHIP1Q9P0W5 487 aaPredicted RBP11.11□□□□□ -0.63
ATG4C-204ENST00000414558 RASA1P20936 1047 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 EFHC2Q5JST6 749 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 SIX5Q8N196 739 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 CABP1Q9NZU7 370 aa11.1□□□□□ -0.63
ATG4C-204ENST00000414558 GPR25O00155 361 aa11.09□□□□□ -0.63
ATG4C-204ENST00000414558 GAS6Q14393 721 aa11.09□□□□□ -0.63
ATG4C-204ENST00000414558 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
ATG4C-204ENST00000414558 RUBCNLQ9H714 662 aa11.09□□□□□ -0.63
ATG4C-204ENST00000414558 USP3Q9Y6I4 520 aa11.09□□□□□ -0.63
ATG4C-204ENST00000414558 M0R2N6 131 aa11.08□□□□□ -0.64
ATG4C-204ENST00000414558 LMOD1P29536 600 aaPredicted RBP11.08□□□□□ -0.64
ATG4C-204ENST00000414558 EPHA4P54764 986 aa11.08□□□□□ -0.64
ATG4C-204ENST00000414558 FOXK2Q01167 660 aa11.08□□□□□ -0.64
ATG4C-204ENST00000414558 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
ATG4C-204ENST00000414558 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
ATG4C-204ENST00000414558 CRISPLD1Q9H336 500 aa11.08□□□□□ -0.64
ATG4C-204ENST00000414558 SRSF11Q05519 484 aaKnown RBP11.07□□□□□ -0.64
ATG4C-204ENST00000414558 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
ATG4C-204ENST00000414558 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
ATG4C-204ENST00000414558 ZDHHC3Q9NYG2 299 aa11.07□□□□□ -0.64
ATG4C-204ENST00000414558 SLURP2P0DP57 97 aa11.06□□□□□ -0.64
ATG4C-204ENST00000414558 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
ATG4C-204ENST00000414558 ATP4AP20648 1035 aa11.06□□□□□ -0.64
ATG4C-204ENST00000414558 SLC9A9Q8IVB4 645 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms