RNA–Protein interactions for RNA: ENST00000414302.6

VNN3-204, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-204ENST00000414302 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
VNN3-204ENST00000414302 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
VNN3-204ENST00000414302 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
VNN3-204ENST00000414302 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
VNN3-204ENST00000414302 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
VNN3-204ENST00000414302 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
VNN3-204ENST00000414302 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
VNN3-204ENST00000414302 C4BP0C0L5 1744 aa13.2□□□□□ -0.3
VNN3-204ENST00000414302 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
VNN3-204ENST00000414302 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
VNN3-204ENST00000414302 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
VNN3-204ENST00000414302 POLD1P28340 1107 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 ARXQ96QS3 562 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 SGIP1Q9BQI5 828 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
VNN3-204ENST00000414302 GNPATO15228 680 aa13.18□□□□□ -0.3
VNN3-204ENST00000414302 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
VNN3-204ENST00000414302 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
VNN3-204ENST00000414302 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
VNN3-204ENST00000414302 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
VNN3-204ENST00000414302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
VNN3-204ENST00000414302 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
VNN3-204ENST00000414302 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
VNN3-204ENST00000414302 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
VNN3-204ENST00000414302 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
VNN3-204ENST00000414302 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
VNN3-204ENST00000414302 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
VNN3-204ENST00000414302 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
VNN3-204ENST00000414302 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
VNN3-204ENST00000414302 SLC39A6Q13433 755 aa13.15□□□□□ -0.3
VNN3-204ENST00000414302 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
VNN3-204ENST00000414302 SSFA2P28290 1259 aa13.14□□□□□ -0.31
VNN3-204ENST00000414302 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
VNN3-204ENST00000414302 MRC1P22897 1456 aa13.14□□□□□ -0.31
VNN3-204ENST00000414302 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
VNN3-204ENST00000414302 TEFQ10587 303 aa13.13□□□□□ -0.31
VNN3-204ENST00000414302 RALBP1Q15311 655 aa13.13□□□□□ -0.31
VNN3-204ENST00000414302 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
VNN3-204ENST00000414302 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
VNN3-204ENST00000414302 FCHSD2O94868 740 aa13.13□□□□□ -0.31
VNN3-204ENST00000414302 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
VNN3-204ENST00000414302 NEFMP07197 916 aa13.12□□□□□ -0.31
VNN3-204ENST00000414302 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
VNN3-204ENST00000414302 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
VNN3-204ENST00000414302 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
VNN3-204ENST00000414302 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
VNN3-204ENST00000414302 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
VNN3-204ENST00000414302 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
VNN3-204ENST00000414302 MCM10Q7L590 875 aa13.11□□□□□ -0.31
VNN3-204ENST00000414302 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
VNN3-204ENST00000414302 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
VNN3-204ENST00000414302 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
VNN3-204ENST00000414302 TJP1Q07157 1748 aa13.1□□□□□ -0.31
VNN3-204ENST00000414302 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
VNN3-204ENST00000414302 ZNF831Q5JPB2 1677 aa13.1□□□□□ -0.31
VNN3-204ENST00000414302 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
VNN3-204ENST00000414302 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
VNN3-204ENST00000414302 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
VNN3-204ENST00000414302 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
VNN3-204ENST00000414302 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
VNN3-204ENST00000414302 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
VNN3-204ENST00000414302 RFC4P35249 363 aa13.09□□□□□ -0.31
VNN3-204ENST00000414302 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
VNN3-204ENST00000414302 COL24A1Q17RW2 1714 aa13.09□□□□□ -0.31
VNN3-204ENST00000414302 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.31
VNN3-204ENST00000414302 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.32
VNN3-204ENST00000414302 ADRA2BP18089 450 aa13.08□□□□□ -0.32
VNN3-204ENST00000414302 INTS5Q6P9B9 1019 aaKnown RBP13.08□□□□□ -0.32
VNN3-204ENST00000414302 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
VNN3-204ENST00000414302 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
VNN3-204ENST00000414302 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
VNN3-204ENST00000414302 GPR162Q16538 588 aa13.07□□□□□ -0.32
VNN3-204ENST00000414302 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
VNN3-204ENST00000414302 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
VNN3-204ENST00000414302 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
VNN3-204ENST00000414302 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
VNN3-204ENST00000414302 KCNQ3O43525 872 aa13.06□□□□□ -0.32
VNN3-204ENST00000414302 MMP10P09238 476 aa13.06□□□□□ -0.32
VNN3-204ENST00000414302 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
VNN3-204ENST00000414302 ZBTB1Q9Y2K1 713 aa13.06□□□□□ -0.32
VNN3-204ENST00000414302 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
VNN3-204ENST00000414302 GYS1P13807 737 aa13.05□□□□□ -0.32
VNN3-204ENST00000414302 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
VNN3-204ENST00000414302 FMNL2Q96PY5 1086 aa13.05□□□□□ -0.32
VNN3-204ENST00000414302 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
VNN3-204ENST00000414302 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
VNN3-204ENST00000414302 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
VNN3-204ENST00000414302 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
VNN3-204ENST00000414302 WDR43Q15061 677 aaKnown RBP eCLIP13.04□□□□□ -0.32
VNN3-204ENST00000414302 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
VNN3-204ENST00000414302 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
VNN3-204ENST00000414302 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
VNN3-204ENST00000414302 WWC3Q9ULE0 1092 aa13.04□□□□□ -0.32
VNN3-204ENST00000414302 ZNF330Q9Y3S2 320 aaPredicted RBP13.04□□□□□ -0.32
VNN3-204ENST00000414302 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
VNN3-204ENST00000414302 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
VNN3-204ENST00000414302 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms