RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
HCG27-202ENST00000414008 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
HCG27-202ENST00000414008 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
HCG27-202ENST00000414008 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
HCG27-202ENST00000414008 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
HCG27-202ENST00000414008 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
HCG27-202ENST00000414008 SOS2Q07890 1332 aaPredicted RBP13.52□□□□□ -0.25
HCG27-202ENST00000414008 JCADQ9P266 1359 aa13.52□□□□□ -0.25
HCG27-202ENST00000414008 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
HCG27-202ENST00000414008 PHLPP1O60346 1717 aa13.52□□□□□ -0.25
HCG27-202ENST00000414008 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
HCG27-202ENST00000414008 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
HCG27-202ENST00000414008 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
HCG27-202ENST00000414008 PSME1Q06323 249 aa13.5□□□□□ -0.25
HCG27-202ENST00000414008 KRT28Q7Z3Y7 464 aa13.5□□□□□ -0.25
HCG27-202ENST00000414008 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
HCG27-202ENST00000414008 PHOX2BQ99453 314 aa13.5□□□□□ -0.25
HCG27-202ENST00000414008 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
HCG27-202ENST00000414008 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
HCG27-202ENST00000414008 USP47Q96K76 1375 aa13.49□□□□□ -0.25
HCG27-202ENST00000414008 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
HCG27-202ENST00000414008 NHSL1Q5SYE7 1610 aa13.49□□□□□ -0.25
HCG27-202ENST00000414008 ATP7BP35670 1465 aa13.48□□□□□ -0.25
HCG27-202ENST00000414008 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
HCG27-202ENST00000414008 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
HCG27-202ENST00000414008 TESK2Q96S53 571 aa13.47□□□□□ -0.25
HCG27-202ENST00000414008 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
HCG27-202ENST00000414008 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
HCG27-202ENST00000414008 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
HCG27-202ENST00000414008 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
HCG27-202ENST00000414008 PRR14Q9BWN1 585 aa13.46□□□□□ -0.25
HCG27-202ENST00000414008 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
HCG27-202ENST00000414008 PXDNQ92626 1479 aa13.46□□□□□ -0.25
HCG27-202ENST00000414008 ACEP12821 1306 aa13.45□□□□□ -0.26
HCG27-202ENST00000414008 SULF1Q8IWU6 871 aa13.45□□□□□ -0.26
HCG27-202ENST00000414008 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
HCG27-202ENST00000414008 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
HCG27-202ENST00000414008 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
HCG27-202ENST00000414008 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
HCG27-202ENST00000414008 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
HCG27-202ENST00000414008 NUTM2AQ8IVF1 878 aaPredicted RBP13.44□□□□□ -0.26
HCG27-202ENST00000414008 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
HCG27-202ENST00000414008 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
HCG27-202ENST00000414008 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
HCG27-202ENST00000414008 ATAD2Q6PL18 1390 aa13.44□□□□□ -0.26
HCG27-202ENST00000414008 TMF1P82094 1093 aa13.43□□□□□ -0.26
HCG27-202ENST00000414008 AK7Q96M32 723 aa13.43□□□□□ -0.26
HCG27-202ENST00000414008 POLR3AO14802 1390 aaPredicted RBP13.43□□□□□ -0.26
HCG27-202ENST00000414008 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
HCG27-202ENST00000414008 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
HCG27-202ENST00000414008 KMT5BQ4FZB7 885 aa13.42□□□□□ -0.26
HCG27-202ENST00000414008 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
HCG27-202ENST00000414008 CLCN1P35523 988 aa13.41□□□□□ -0.26
HCG27-202ENST00000414008 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
HCG27-202ENST00000414008 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
HCG27-202ENST00000414008 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
HCG27-202ENST00000414008 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
HCG27-202ENST00000414008 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 APLP1P51693 650 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
HCG27-202ENST00000414008 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
HCG27-202ENST00000414008 CFHP08603 1231 aa13.39□□□□□ -0.27
HCG27-202ENST00000414008 SLC10A3P09131 477 aa13.39□□□□□ -0.27
HCG27-202ENST00000414008 SLC12A5Q9H2X9 1139 aa13.39□□□□□ -0.27
HCG27-202ENST00000414008 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
HCG27-202ENST00000414008 TOPAZ1Q8N9V7 1692 aa13.39□□□□□ -0.27
HCG27-202ENST00000414008 ADAMTS2O95450 1211 aa13.38□□□□□ -0.27
HCG27-202ENST00000414008 SLC24A3Q9HC58 644 aa13.38□□□□□ -0.27
HCG27-202ENST00000414008 LRP6O75581 1613 aa13.38□□□□□ -0.27
HCG27-202ENST00000414008 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
HCG27-202ENST00000414008 TTLL12Q14166 644 aaPredicted RBP13.37□□□□□ -0.27
HCG27-202ENST00000414008 AMHR2Q16671 573 aa13.36□□□□□ -0.27
HCG27-202ENST00000414008 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
HCG27-202ENST00000414008 ABTB2Q8N961 1025 aa13.36□□□□□ -0.27
HCG27-202ENST00000414008 CABLES1Q8TDN4 633 aa13.36□□□□□ -0.27
HCG27-202ENST00000414008 TERF2IPQ9NYB0 399 aa13.36□□□□□ -0.27
HCG27-202ENST00000414008 USP6P35125 1406 aa13.36□□□□□ -0.27
HCG27-202ENST00000414008 NINLQ9Y2I6 1382 aa13.35□□□□□ -0.27
HCG27-202ENST00000414008 CPSF1Q10570 1443 aaKnown RBP13.35□□□□□ -0.27
HCG27-202ENST00000414008 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
HCG27-202ENST00000414008 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
HCG27-202ENST00000414008 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
HCG27-202ENST00000414008 TRIM66O15016 1216 aa13.34□□□□□ -0.27
HCG27-202ENST00000414008 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
HCG27-202ENST00000414008 NGLY1Q96IV0 654 aa13.34□□□□□ -0.27
HCG27-202ENST00000414008 C8orf37Q96NL8 207 aa13.34□□□□□ -0.27
HCG27-202ENST00000414008 SSH2Q76I76 1423 aa13.33□□□□□ -0.28
HCG27-202ENST00000414008 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
HCG27-202ENST00000414008 ITGBL1O95965 494 aaPredicted RBP13.33□□□□□ -0.28
HCG27-202ENST00000414008 KCNC4Q03721 635 aa13.33□□□□□ -0.28
HCG27-202ENST00000414008 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
HCG27-202ENST00000414008 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
HCG27-202ENST00000414008 PCDHB3Q9Y5E6 796 aa13.33□□□□□ -0.28
HCG27-202ENST00000414008 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.28
HCG27-202ENST00000414008 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
HCG27-202ENST00000414008 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms