RNA–Protein interactions for RNA: ENST00000413963.2

AP001888.1-201, humanhuman

BASIC

Gene AP001888.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001888.1-201ENST00000413963 IL16Q14005 1332 aa13.97□□□□□ -0.17
AP001888.1-201ENST00000413963 TRIM37O94972 964 aa13.97□□□□□ -0.17
AP001888.1-201ENST00000413963 SMARCC1Q92922 1105 aaPredicted RBP13.97□□□□□ -0.17
AP001888.1-201ENST00000413963 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.17
AP001888.1-201ENST00000413963 BTBD11A6QL63 1104 aa13.96□□□□□ -0.17
AP001888.1-201ENST00000413963 KCNQ2O43526 872 aa13.96□□□□□ -0.17
AP001888.1-201ENST00000413963 PIGBQ92521 554 aa13.96□□□□□ -0.17
AP001888.1-201ENST00000413963 HMGB2P26583 209 aaKnown RBP13.95□□□□□ -0.18
AP001888.1-201ENST00000413963 GNAI1P63096 354 aa13.95□□□□□ -0.18
AP001888.1-201ENST00000413963 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
AP001888.1-201ENST00000413963 CFAP44Q96MT7 982 aa13.95□□□□□ -0.18
AP001888.1-201ENST00000413963 THUMPD2Q9BTF0 503 aaKnown RBP13.95□□□□□ -0.18
AP001888.1-201ENST00000413963 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
AP001888.1-201ENST00000413963 BTAF1O14981 1849 aa13.94□□□□□ -0.18
AP001888.1-201ENST00000413963 SENP3-EIF4A1A0A087X0R7 540 aa13.94□□□□□ -0.18
AP001888.1-201ENST00000413963 ZBED9Q6R2W3 1325 aa13.93□□□□□ -0.18
AP001888.1-201ENST00000413963 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
AP001888.1-201ENST00000413963 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
AP001888.1-201ENST00000413963 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
AP001888.1-201ENST00000413963 EP400Q96L91 3159 aa13.93□□□□□ -0.18
AP001888.1-201ENST00000413963 ZNF521Q96K83 1311 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 CHL1O00533 1208 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 PLSCR1O15162 318 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 APBA3O96018 575 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 ZNF790Q6PG37 636 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 ILDR2Q71H61 639 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 TNS1Q9HBL0 1735 aaKnown RBP13.92□□□□□ -0.18
AP001888.1-201ENST00000413963 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
AP001888.1-201ENST00000413963 E9PSI1 815 aa13.91□□□□□ -0.18
AP001888.1-201ENST00000413963 ZNF853P0CG23 659 aa13.91□□□□□ -0.18
AP001888.1-201ENST00000413963 BAG6P46379 1132 aa13.91□□□□□ -0.18
AP001888.1-201ENST00000413963 ASAP1Q9ULH1 1129 aa13.91□□□□□ -0.18
AP001888.1-201ENST00000413963 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
AP001888.1-201ENST00000413963 PALLDQ8WX93 1383 aa13.9□□□□□ -0.18
AP001888.1-201ENST00000413963 RGPD3A6NKT7 1758 aaPredicted RBP13.9□□□□□ -0.18
AP001888.1-201ENST00000413963 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
AP001888.1-201ENST00000413963 RGPD4Q7Z3J3 1758 aa13.9□□□□□ -0.18
AP001888.1-201ENST00000413963 SLC39A6Q13433 755 aa13.89□□□□□ -0.19
AP001888.1-201ENST00000413963 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
AP001888.1-201ENST00000413963 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
AP001888.1-201ENST00000413963 MIS18AQ9NYP9 233 aa13.89□□□□□ -0.19
AP001888.1-201ENST00000413963 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 MBIPQ9NS73 344 aa13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 UBR2Q8IWV8 1755 aa13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 ZNF831Q5JPB2 1677 aa13.88□□□□□ -0.19
AP001888.1-201ENST00000413963 LY75O60449 1722 aa13.87□□□□□ -0.19
AP001888.1-201ENST00000413963 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
AP001888.1-201ENST00000413963 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
AP001888.1-201ENST00000413963 SIK1P57059 783 aa13.87□□□□□ -0.19
AP001888.1-201ENST00000413963 SLFN5Q08AF3 891 aa13.87□□□□□ -0.19
AP001888.1-201ENST00000413963 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
AP001888.1-201ENST00000413963 KCPQ6ZWJ8 1503 aa13.86□□□□□ -0.19
AP001888.1-201ENST00000413963 SNRPA1P09661 255 aaKnown RBP13.86□□□□□ -0.19
AP001888.1-201ENST00000413963 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
AP001888.1-201ENST00000413963 ZNF496Q96IT1 587 aaPredicted RBP13.86□□□□□ -0.19
AP001888.1-201ENST00000413963 CCNL1Q9UK58 526 aaPredicted RBP13.86□□□□□ -0.19
AP001888.1-201ENST00000413963 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
AP001888.1-201ENST00000413963 HEG1Q9ULI3 1381 aa13.85□□□□□ -0.19
AP001888.1-201ENST00000413963 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
AP001888.1-201ENST00000413963 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
AP001888.1-201ENST00000413963 TSR2Q969E8 191 aaKnown RBP13.85□□□□□ -0.19
AP001888.1-201ENST00000413963 KCNQ3O43525 872 aa13.84□□□□□ -0.19
AP001888.1-201ENST00000413963 STARD3NLO95772 234 aa13.84□□□□□ -0.19
AP001888.1-201ENST00000413963 HOXB7P09629 217 aa13.84□□□□□ -0.19
AP001888.1-201ENST00000413963 CICQ96RK0 1608 aaPredicted RBP13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 TRMT2AQ8IZ69 625 aaKnown RBP13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 CDCA7LQ96GN5 454 aa13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 CAMKK2Q96RR4 588 aa13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
AP001888.1-201ENST00000413963 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
AP001888.1-201ENST00000413963 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
AP001888.1-201ENST00000413963 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
AP001888.1-201ENST00000413963 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
AP001888.1-201ENST00000413963 DUSP27Q5VZP5 1158 aa13.81□□□□□ -0.2
AP001888.1-201ENST00000413963 DEFB132Q7Z7B7 95 aa13.81□□□□□ -0.2
AP001888.1-201ENST00000413963 C5P01031 1676 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 RREB1Q92766 1687 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 PROM2Q8N271 834 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 TJP1Q07157 1748 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 LAMB4A4D0S4 1761 aa13.8□□□□□ -0.2
AP001888.1-201ENST00000413963 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
AP001888.1-201ENST00000413963 ITPK1Q13572 414 aa13.79□□□□□ -0.2
AP001888.1-201ENST00000413963 RC3H1Q5TC82 1133 aaKnown RBP13.79□□□□□ -0.2
AP001888.1-201ENST00000413963 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
AP001888.1-201ENST00000413963 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
AP001888.1-201ENST00000413963 ERBB4Q15303 1308 aa13.79□□□□□ -0.2
AP001888.1-201ENST00000413963 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms