RNA–Protein interactions for RNA: ENST00000413878.1

CDH2-203, Transcript of cadherin 2, humanhuman

TSL 4

Gene CDH2, Length 563 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-203ENST00000413878 TMOD3Q9NYL9 352 aa18.78■□□□□ 0.6
CDH2-203ENST00000413878 LY75O60449 1722 aa18.77■□□□□ 0.6
CDH2-203ENST00000413878 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
CDH2-203ENST00000413878 FCHSD2O94868 740 aa18.77■□□□□ 0.6
CDH2-203ENST00000413878 SCN11AQ9UI33 1791 aa18.77■□□□□ 0.6
CDH2-203ENST00000413878 KDM6AO15550 1401 aaPredicted RBP18.76■□□□□ 0.59
CDH2-203ENST00000413878 SLC27A3Q5K4L6 730 aa18.76■□□□□ 0.59
CDH2-203ENST00000413878 CABP4P57796 275 aa18.75■□□□□ 0.59
CDH2-203ENST00000413878 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
CDH2-203ENST00000413878 SLC16A10Q8TF71 515 aa18.75■□□□□ 0.59
CDH2-203ENST00000413878 SMARCC1Q92922 1105 aaPredicted RBP18.75■□□□□ 0.59
CDH2-203ENST00000413878 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
CDH2-203ENST00000413878 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
CDH2-203ENST00000413878 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
CDH2-203ENST00000413878 NLGN2Q8NFZ4 835 aa18.73■□□□□ 0.59
CDH2-203ENST00000413878 PALLDQ8WX93 1383 aa18.72■□□□□ 0.59
CDH2-203ENST00000413878 GPR162Q16538 588 aa18.72■□□□□ 0.59
CDH2-203ENST00000413878 TFCP2L1Q9NZI6 479 aa18.72■□□□□ 0.59
CDH2-203ENST00000413878 CCNL1Q9UK58 526 aaPredicted RBP18.72■□□□□ 0.59
CDH2-203ENST00000413878 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
CDH2-203ENST00000413878 NEFMP07197 916 aa18.71■□□□□ 0.59
CDH2-203ENST00000413878 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
CDH2-203ENST00000413878 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.59
CDH2-203ENST00000413878 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
CDH2-203ENST00000413878 ANP32CO43423 234 aa18.7■□□□□ 0.58
CDH2-203ENST00000413878 POLD1P28340 1107 aa18.7■□□□□ 0.58
CDH2-203ENST00000413878 C1QTNF8P60827 252 aa18.7■□□□□ 0.58
CDH2-203ENST00000413878 NFATC2IPQ8NCF5 419 aa18.7■□□□□ 0.58
CDH2-203ENST00000413878 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
CDH2-203ENST00000413878 ATG3Q9NT62 314 aa18.7■□□□□ 0.58
CDH2-203ENST00000413878 TAF1LQ8IZX4 1826 aa18.69■□□□□ 0.58
CDH2-203ENST00000413878 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
CDH2-203ENST00000413878 SLC52A2Q9HAB3 445 aa18.68■□□□□ 0.58
CDH2-203ENST00000413878 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
CDH2-203ENST00000413878 ADAMTS7Q9UKP4 1686 aa18.67■□□□□ 0.58
CDH2-203ENST00000413878 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
CDH2-203ENST00000413878 LOC102724428A0A0B4J2F2 783 aa18.67■□□□□ 0.58
CDH2-203ENST00000413878 SIK1P57059 783 aa18.67■□□□□ 0.58
CDH2-203ENST00000413878 WDR43Q15061 677 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDH2-203ENST00000413878 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
CDH2-203ENST00000413878 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
CDH2-203ENST00000413878 YBX3P16989 372 aaKnown RBP eCLIP18.66■□□□□ 0.58
CDH2-203ENST00000413878 HMGB2P26583 209 aaKnown RBP18.66■□□□□ 0.58
CDH2-203ENST00000413878 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
CDH2-203ENST00000413878 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
CDH2-203ENST00000413878 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
CDH2-203ENST00000413878 C5P01031 1676 aa18.65■□□□□ 0.58
CDH2-203ENST00000413878 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
CDH2-203ENST00000413878 MRC1P22897 1456 aa18.65■□□□□ 0.58
CDH2-203ENST00000413878 TEFQ10587 303 aa18.64■□□□□ 0.57
CDH2-203ENST00000413878 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
CDH2-203ENST00000413878 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
CDH2-203ENST00000413878 MSH5O43196 834 aa18.62■□□□□ 0.57
CDH2-203ENST00000413878 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
CDH2-203ENST00000413878 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
CDH2-203ENST00000413878 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
CDH2-203ENST00000413878 SIPA1L3O60292 1781 aaPredicted RBP18.62■□□□□ 0.57
CDH2-203ENST00000413878 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
CDH2-203ENST00000413878 PTCD1O75127 700 aaKnown RBP18.61■□□□□ 0.57
CDH2-203ENST00000413878 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 ITPK1Q13572 414 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 MCM10Q7L590 875 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 CCDC146Q8IYE0 955 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
CDH2-203ENST00000413878 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
CDH2-203ENST00000413878 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
CDH2-203ENST00000413878 LINC00116Q8NCU8 138 aa18.59■□□□□ 0.57
CDH2-203ENST00000413878 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
CDH2-203ENST00000413878 CEP350Q5VT06 3117 aa18.59■□□□□ 0.57
CDH2-203ENST00000413878 ZNF831Q5JPB2 1677 aa18.59■□□□□ 0.57
CDH2-203ENST00000413878 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
CDH2-203ENST00000413878 AK7Q96M32 723 aa18.58■□□□□ 0.56
CDH2-203ENST00000413878 MYH14Q7Z406 1995 aaKnown RBP18.57■□□□□ 0.56
CDH2-203ENST00000413878 SMIM5Q71RC9 77 aa18.57■□□□□ 0.56
CDH2-203ENST00000413878 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
CDH2-203ENST00000413878 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
CDH2-203ENST00000413878 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
CDH2-203ENST00000413878 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
CDH2-203ENST00000413878 RIPK4P57078 832 aa18.56■□□□□ 0.56
CDH2-203ENST00000413878 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
CDH2-203ENST00000413878 UBR2Q8IWV8 1755 aa18.55■□□□□ 0.56
CDH2-203ENST00000413878 COL5A3P25940 1745 aaPredicted RBP18.55■□□□□ 0.56
CDH2-203ENST00000413878 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
CDH2-203ENST00000413878 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
CDH2-203ENST00000413878 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
CDH2-203ENST00000413878 ATP10DQ9P241 1426 aa18.54■□□□□ 0.56
CDH2-203ENST00000413878 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
CDH2-203ENST00000413878 TJP1Q07157 1748 aa18.53■□□□□ 0.56
CDH2-203ENST00000413878 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
CDH2-203ENST00000413878 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
CDH2-203ENST00000413878 CD2APQ9Y5K6 639 aa18.53■□□□□ 0.56
CDH2-203ENST00000413878 GNPATO15228 680 aa18.52■□□□□ 0.56
CDH2-203ENST00000413878 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
CDH2-203ENST00000413878 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
CDH2-203ENST00000413878 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
CDH2-203ENST00000413878 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
CDH2-203ENST00000413878 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
CDH2-203ENST00000413878 THUMPD2Q9BTF0 503 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms