RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 IL17REQ8NFR9 667 aa15.21■□□□□ 0.03
HDAC9-206ENST00000413380 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
HDAC9-206ENST00000413380 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
HDAC9-206ENST00000413380 RNMTO43148 476 aaKnown RBP15.19■□□□□ 0.02
HDAC9-206ENST00000413380 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
HDAC9-206ENST00000413380 POTEAQ6S8J7 498 aa15.19■□□□□ 0.02
HDAC9-206ENST00000413380 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
HDAC9-206ENST00000413380 NHSQ6T4R5 1651 aa15.19■□□□□ 0.02
HDAC9-206ENST00000413380 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
HDAC9-206ENST00000413380 RGS12O14924 1447 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 RXRBP28702 533 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 MCM10Q7L590 875 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 SEPT12Q8IYM1 358 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
HDAC9-206ENST00000413380 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 SALL2Q9Y467 1007 aaPredicted RBP15.18■□□□□ 0.02
HDAC9-206ENST00000413380 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
HDAC9-206ENST00000413380 EP400Q96L91 3159 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 ERVV-2B6SEH9 535 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 DCTN1Q14203 1278 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 MPRIPQ6WCQ1 1025 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
HDAC9-206ENST00000413380 E9PSI1 815 aa15.16■□□□□ 0.02
HDAC9-206ENST00000413380 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
HDAC9-206ENST00000413380 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
HDAC9-206ENST00000413380 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
HDAC9-206ENST00000413380 THUMPD2Q9BTF0 503 aaKnown RBP15.16■□□□□ 0.02
HDAC9-206ENST00000413380 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
HDAC9-206ENST00000413380 CHL1O00533 1208 aa15.14■□□□□ 0.01
HDAC9-206ENST00000413380 GNAI1P63096 354 aa15.14■□□□□ 0.01
HDAC9-206ENST00000413380 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-206ENST00000413380 CICQ96RK0 1608 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-206ENST00000413380 TEFQ10587 303 aa15.13■□□□□ 0.01
HDAC9-206ENST00000413380 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
HDAC9-206ENST00000413380 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
HDAC9-206ENST00000413380 BTAF1O14981 1849 aa15.13■□□□□ 0.01
HDAC9-206ENST00000413380 ZNF831Q5JPB2 1677 aa15.12■□□□□ 0.01
HDAC9-206ENST00000413380 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
HDAC9-206ENST00000413380 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
HDAC9-206ENST00000413380 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
HDAC9-206ENST00000413380 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
HDAC9-206ENST00000413380 A0A0G2JS52 829 aa15.11■□□□□ 0.01
HDAC9-206ENST00000413380 MYT1Q01538 1121 aa15.11■□□□□ 0.01
HDAC9-206ENST00000413380 CACNA1FO60840 1977 aa15.11■□□□□ 0.01
HDAC9-206ENST00000413380 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
HDAC9-206ENST00000413380 KCPQ6ZWJ8 1503 aa15.1■□□□□ 0.01
HDAC9-206ENST00000413380 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
HDAC9-206ENST00000413380 LAMB4A4D0S4 1761 aa15.09■□□□□ 0.01
HDAC9-206ENST00000413380 CABP4P57796 275 aa15.09■□□□□ 0.01
HDAC9-206ENST00000413380 NFATC2IPQ8NCF5 419 aa15.09■□□□□ 0.01
HDAC9-206ENST00000413380 LY75O60449 1722 aa15.09■□□□□ 0.01
HDAC9-206ENST00000413380 TMOD3Q9NYL9 352 aa15.08■□□□□ 0
HDAC9-206ENST00000413380 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
HDAC9-206ENST00000413380 TNS1Q9HBL0 1735 aaKnown RBP15.08■□□□□ 0
HDAC9-206ENST00000413380 RGPD3A6NKT7 1758 aaPredicted RBP15.08■□□□□ 0
HDAC9-206ENST00000413380 RGPD4Q7Z3J3 1758 aa15.08■□□□□ 0
HDAC9-206ENST00000413380 C5P01031 1676 aa15.07■□□□□ 0
HDAC9-206ENST00000413380 BTBD11A6QL63 1104 aa15.07■□□□□ 0
HDAC9-206ENST00000413380 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
HDAC9-206ENST00000413380 ZNF790Q6PG37 636 aa15.07■□□□□ 0
HDAC9-206ENST00000413380 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
HDAC9-206ENST00000413380 PIGBQ92521 554 aa15.07■□□□□ 0
HDAC9-206ENST00000413380 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
HDAC9-206ENST00000413380 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
HDAC9-206ENST00000413380 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
HDAC9-206ENST00000413380 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ -0
HDAC9-206ENST00000413380 TJP1Q07157 1748 aa15.05■□□□□ -0
HDAC9-206ENST00000413380 HOXB7P09629 217 aa15.04■□□□□ -0
HDAC9-206ENST00000413380 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
HDAC9-206ENST00000413380 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
HDAC9-206ENST00000413380 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
HDAC9-206ENST00000413380 KCNQ2O43526 872 aa15.03■□□□□ -0
HDAC9-206ENST00000413380 ZNF428Q96B54 188 aa15.03■□□□□ -0
HDAC9-206ENST00000413380 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
HDAC9-206ENST00000413380 ATG3Q9NT62 314 aa15.03■□□□□ -0
HDAC9-206ENST00000413380 TAF1LQ8IZX4 1826 aa15.03■□□□□ -0
HDAC9-206ENST00000413380 KCNQ3O43525 872 aa15.02■□□□□ -0
HDAC9-206ENST00000413380 EXOSC9Q06265 439 aaKnown RBP15.02■□□□□ -0
HDAC9-206ENST00000413380 FAM182BQ5T319 152 aa15.02■□□□□ -0
HDAC9-206ENST00000413380 ACSBG1Q96GR2 724 aa15.02■□□□□ -0
HDAC9-206ENST00000413380 RREB1Q92766 1687 aa15.02□□□□□ -0.01
HDAC9-206ENST00000413380 SLC39A6Q13433 755 aa15.01□□□□□ -0.01
HDAC9-206ENST00000413380 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
HDAC9-206ENST00000413380 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
HDAC9-206ENST00000413380 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
HDAC9-206ENST00000413380 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
HDAC9-206ENST00000413380 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
HDAC9-206ENST00000413380 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
HDAC9-206ENST00000413380 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
HDAC9-206ENST00000413380 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
HDAC9-206ENST00000413380 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
HDAC9-206ENST00000413380 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
HDAC9-206ENST00000413380 VAMP4O75379 141 aa14.99□□□□□ -0.01
HDAC9-206ENST00000413380 KRT24Q2M2I5 525 aa14.99□□□□□ -0.01
HDAC9-206ENST00000413380 TWISTNBQ3B726 338 aaPredicted RBP14.99□□□□□ -0.01
HDAC9-206ENST00000413380 TSPYL6Q8N831 410 aa14.99□□□□□ -0.01
HDAC9-206ENST00000413380 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms