RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
LITAF-203ENST00000413364 ALS2Q96Q42 1657 aa16.19■□□□□ 0.18
LITAF-203ENST00000413364 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
LITAF-203ENST00000413364 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
LITAF-203ENST00000413364 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
LITAF-203ENST00000413364 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
LITAF-203ENST00000413364 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
LITAF-203ENST00000413364 LNPKQ9C0E8 428 aa16.17■□□□□ 0.18
LITAF-203ENST00000413364 NAP1L2Q9ULW6 460 aaPredicted RBP16.17■□□□□ 0.18
LITAF-203ENST00000413364 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
LITAF-203ENST00000413364 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
LITAF-203ENST00000413364 G2E3Q7L622 706 aa16.17■□□□□ 0.18
LITAF-203ENST00000413364 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
LITAF-203ENST00000413364 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
LITAF-203ENST00000413364 LMO7Q8WWI1 1683 aa16.16■□□□□ 0.18
LITAF-203ENST00000413364 FAM208AQ9UK61 1670 aaKnown RBP16.16■□□□□ 0.18
LITAF-203ENST00000413364 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
LITAF-203ENST00000413364 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
LITAF-203ENST00000413364 CADPS2Q86UW7 1296 aa16.16■□□□□ 0.18
LITAF-203ENST00000413364 HSPA2P54652 639 aa16.15■□□□□ 0.18
LITAF-203ENST00000413364 ZNF530Q6P9A1 599 aaPredicted RBP16.15■□□□□ 0.18
LITAF-203ENST00000413364 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
LITAF-203ENST00000413364 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
LITAF-203ENST00000413364 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
LITAF-203ENST00000413364 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
LITAF-203ENST00000413364 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
LITAF-203ENST00000413364 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
LITAF-203ENST00000413364 ARXQ96QS3 562 aa16.14■□□□□ 0.17
LITAF-203ENST00000413364 LGR6Q9HBX8 967 aa16.14■□□□□ 0.17
LITAF-203ENST00000413364 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
LITAF-203ENST00000413364 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
LITAF-203ENST00000413364 MEIS3Q99687 375 aa16.13■□□□□ 0.17
LITAF-203ENST00000413364 DCTPP1Q9H773 170 aa16.13■□□□□ 0.17
LITAF-203ENST00000413364 FLIIQ13045 1269 aa16.12■□□□□ 0.17
LITAF-203ENST00000413364 CEP85Q6P2H3 762 aa16.12■□□□□ 0.17
LITAF-203ENST00000413364 IPO4Q8TEX9 1081 aaKnown RBP16.12■□□□□ 0.17
LITAF-203ENST00000413364 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
LITAF-203ENST00000413364 OVOS2A0A0G2JMS6 1433 aa16.12■□□□□ 0.17
LITAF-203ENST00000413364 F6X3S4 739 aa16.12■□□□□ 0.17
LITAF-203ENST00000413364 ERBB3P21860 1342 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 ZC3H6P61129 1189 aaKnown RBP16.11■□□□□ 0.17
LITAF-203ENST00000413364 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 SMAP1Q8IYB5 467 aaPredicted RBP16.11■□□□□ 0.17
LITAF-203ENST00000413364 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
LITAF-203ENST00000413364 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 PXDNQ92626 1479 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 HOXB7P09629 217 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 EIF4A1P60842 406 aaKnown RBP16.11■□□□□ 0.17
LITAF-203ENST00000413364 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
LITAF-203ENST00000413364 TEFQ10587 303 aa16.1■□□□□ 0.17
LITAF-203ENST00000413364 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
LITAF-203ENST00000413364 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
LITAF-203ENST00000413364 RNMTO43148 476 aaKnown RBP16.1■□□□□ 0.17
LITAF-203ENST00000413364 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
LITAF-203ENST00000413364 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
LITAF-203ENST00000413364 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
LITAF-203ENST00000413364 HDGFL1Q5TGJ6 251 aa16.1■□□□□ 0.17
LITAF-203ENST00000413364 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
LITAF-203ENST00000413364 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
LITAF-203ENST00000413364 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
LITAF-203ENST00000413364 GTF2E1P29083 439 aaPredicted RBP16.08■□□□□ 0.17
LITAF-203ENST00000413364 PXDNLA1KZ92 1463 aa16.08■□□□□ 0.16
LITAF-203ENST00000413364 BTBD11A6QL63 1104 aa16.07■□□□□ 0.16
LITAF-203ENST00000413364 ABCC6O95255 1503 aa16.07■□□□□ 0.16
LITAF-203ENST00000413364 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
LITAF-203ENST00000413364 XIRP1Q702N8 1843 aaKnown RBP16.06■□□□□ 0.16
LITAF-203ENST00000413364 COL18A1P39060 1754 aa16.06■□□□□ 0.16
LITAF-203ENST00000413364 HMMRO75330 724 aa16.06■□□□□ 0.16
LITAF-203ENST00000413364 N4BP2Q86UW6 1770 aaPredicted RBP16.06■□□□□ 0.16
LITAF-203ENST00000413364 KCNQ3O43525 872 aa16.06■□□□□ 0.16
LITAF-203ENST00000413364 GNAI2P04899 355 aa16.06■□□□□ 0.16
LITAF-203ENST00000413364 GNAI3P08754 354 aa16.06■□□□□ 0.16
LITAF-203ENST00000413364 MFAP1P55081 439 aaKnown RBP16.05■□□□□ 0.16
LITAF-203ENST00000413364 BECN1Q14457 450 aa16.05■□□□□ 0.16
LITAF-203ENST00000413364 NLRP2Q9NX02 1062 aa16.05■□□□□ 0.16
LITAF-203ENST00000413364 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
LITAF-203ENST00000413364 STRCQ7RTU9 1775 aa16.05■□□□□ 0.16
LITAF-203ENST00000413364 RAPGEF4Q8WZA2 1011 aa16.05■□□□□ 0.16
LITAF-203ENST00000413364 C22orf23Q9BZE7 217 aa16.05■□□□□ 0.16
LITAF-203ENST00000413364 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
LITAF-203ENST00000413364 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
LITAF-203ENST00000413364 CRYBG1Q9Y4K1 1723 aa16.04■□□□□ 0.16
LITAF-203ENST00000413364 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
LITAF-203ENST00000413364 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
LITAF-203ENST00000413364 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
LITAF-203ENST00000413364 CPDO75976 1380 aa16.03■□□□□ 0.16
LITAF-203ENST00000413364 PLEKHG2Q9H7P9 1386 aa16.03■□□□□ 0.16
LITAF-203ENST00000413364 CHPF2Q9P2E5 772 aa16.02■□□□□ 0.16
LITAF-203ENST00000413364 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.16
LITAF-203ENST00000413364 SIPA1L3O60292 1781 aaPredicted RBP16.02■□□□□ 0.15
LITAF-203ENST00000413364 TATP17735 454 aaPredicted RBP16.02■□□□□ 0.15
LITAF-203ENST00000413364 UTP14CQ5TAP6 766 aaKnown RBP16.02■□□□□ 0.15
LITAF-203ENST00000413364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.15
LITAF-203ENST00000413364 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
LITAF-203ENST00000413364 CHRNA2Q15822 529 aa16.01■□□□□ 0.15
LITAF-203ENST00000413364 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms