RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SIAH2O43255 324 aa7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 C21orf2O43822 256 aa7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 FKBP4Q02790 459 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 NR5A1Q13285 461 aa7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 CYP2U1Q7Z449 544 aa7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 TSPAN10Q9H1Z9 355 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 RAB6BQ9NRW1 208 aa7.93□□□□□ -1.14
HMGB3P31-201ENST00000413333 ANKRD33BA6NCL7 494 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 FOXO3O43524 673 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 LILRA1O75019 489 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 MAPK1P28482 360 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 TBCELQ5QJ74 424 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 MPNDQ8N594 471 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
HMGB3P31-201ENST00000413333 RBM47A0AV96 593 aaKnown RBP7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 UNCXA6NJT0 531 aa7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 WASLO00401 505 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 PPP1R12BO60237 982 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 NR3C2P08235 984 aa7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 ADD1P35611 737 aaKnown RBP7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 SLC19A1P41440 591 aa7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 ESCO1Q5FWF5 840 aa7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 EMID1Q96A84 441 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 BCL2L13Q9BXK5 485 aa7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 ARHGEF10LQ9HCE6 1279 aa7.91□□□□□ -1.14
HMGB3P31-201ENST00000413333 WNT7AO00755 349 aa7.9□□□□□ -1.14
HMGB3P31-201ENST00000413333 GNRH1P01148 92 aa7.9□□□□□ -1.14
HMGB3P31-201ENST00000413333 A0A1W2PRU2 124 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 ALDH1A1P00352 501 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 EPHA4P54764 986 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 SLC9A9Q8IVB4 645 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 HELQQ8TDG4 1101 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 COL26A1Q96A83 441 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 EMILIN1Q9Y6C2 1016 aa7.89□□□□□ -1.15
HMGB3P31-201ENST00000413333 A6NJY4 79 aa7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 ECM1Q16610 540 aa7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 GIPC2Q8TF65 315 aa7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 SLC4A9Q96Q91 983 aa7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 DCTN4Q9UJW0 460 aa7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
HMGB3P31-201ENST00000413333 SMTNP53814 917 aa7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 ARHGAP4P98171 946 aa7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 FOXC1Q12948 553 aa7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 NPAS4Q8IUM7 802 aa7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 ZSCAN29Q8IWY8 852 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 SAP130Q9H0E3 1048 aa7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 SCHIP1Q9P0W5 487 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P31-201ENST00000413333 FAM13AO94988 1023 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 IL2RAP01589 272 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 MPSTP25325 297 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 FOXK2Q01167 660 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 CBLBQ13191 982 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 NNTQ13423 1086 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 AAMPQ13685 434 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 TLR1Q15399 786 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 SPRYD7Q5W111 196 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 C16orf46Q6P387 395 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 XAGE2Q96GT9 111 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 CHMP3Q9Y3E7 222 aa7.86□□□□□ -1.15
HMGB3P31-201ENST00000413333 ADH1AP07327 375 aa7.85□□□□□ -1.15
HMGB3P31-201ENST00000413333 ZNF697Q5TEC3 545 aa7.85□□□□□ -1.15
HMGB3P31-201ENST00000413333 CNKSR1Q969H4 720 aa7.85□□□□□ -1.15
HMGB3P31-201ENST00000413333 MRRFQ96E11 262 aaKnown RBP7.85□□□□□ -1.15
HMGB3P31-201ENST00000413333 ASB16Q96NS5 453 aa7.85□□□□□ -1.15
HMGB3P31-201ENST00000413333 PSMA6P60900 246 aaKnown RBP7.84□□□□□ -1.15
HMGB3P31-201ENST00000413333 MTFR1Q15390 333 aa7.84□□□□□ -1.15
HMGB3P31-201ENST00000413333 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
HMGB3P31-201ENST00000413333 NGLY1Q96IV0 654 aa7.84□□□□□ -1.15
HMGB3P31-201ENST00000413333 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P31-201ENST00000413333 USP3Q9Y6I4 520 aa7.84□□□□□ -1.15
HMGB3P31-201ENST00000413333 MEN1O00255 615 aa7.83□□□□□ -1.16
HMGB3P31-201ENST00000413333 COX20Q5RI15 118 aa7.83□□□□□ -1.16
HMGB3P31-201ENST00000413333 AGBL1Q96MI9 1066 aa7.83□□□□□ -1.16
HMGB3P31-201ENST00000413333 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
HMGB3P31-201ENST00000413333 CDK2AP1O14519 115 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 TAGLNQ01995 201 aaKnown RBP7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZNF598Q86UK7 904 aaKnown RBP7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 STAG2Q8N3U4 1231 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 TMC1Q8TDI8 760 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 NLRP3Q96P20 1036 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 CABP1Q9NZU7 370 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 BRPF3Q9ULD4 1205 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZNF232Q9UNY5 417 aa7.82□□□□□ -1.16
HMGB3P31-201ENST00000413333 NDUFB5O43674 189 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZIC2O95409 532 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 NPR3P17342 541 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 RELBQ01201 579 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 CENPCQ03188 943 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 NBPF15Q8N660 670 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 KDF1Q8NAX2 398 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 SNIP1Q8TAD8 396 aaKnown RBP7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 ITPKCQ96DU7 683 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZNF395Q9H8N7 513 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 KIAA1522Q9P206 1035 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 STIM2Q9P246 746 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms