RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 OVOS2Q6IE36 1432 aa21.45■■□□□ 1.02
SDCBP-202ENST00000413219 ZMYND15Q9H091 742 aa21.44■■□□□ 1.02
SDCBP-202ENST00000413219 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
SDCBP-202ENST00000413219 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
SDCBP-202ENST00000413219 LRRCC1Q9C099 1032 aa21.43■■□□□ 1.02
SDCBP-202ENST00000413219 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
SDCBP-202ENST00000413219 PKNOX2Q96KN3 472 aa21.43■■□□□ 1.02
SDCBP-202ENST00000413219 SRCIN1Q9C0H9 1055 aa21.43■■□□□ 1.02
SDCBP-202ENST00000413219 TSPY26PQ9H489 355 aa21.43■■□□□ 1.02
SDCBP-202ENST00000413219 PHF14O94880 888 aa21.42■■□□□ 1.02
SDCBP-202ENST00000413219 XPCQ01831 940 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-202ENST00000413219 STAP2Q9UGK3 403 aa21.42■■□□□ 1.02
SDCBP-202ENST00000413219 NCKAP5LQ9HCH0 1330 aa21.42■■□□□ 1.02
SDCBP-202ENST00000413219 MX1P20591 662 aa21.41■■□□□ 1.02
SDCBP-202ENST00000413219 CHMLP26374 656 aa21.41■■□□□ 1.02
SDCBP-202ENST00000413219 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
SDCBP-202ENST00000413219 AOX1Q06278 1338 aa21.41■■□□□ 1.02
SDCBP-202ENST00000413219 GNAI3P08754 354 aa21.41■■□□□ 1.02
SDCBP-202ENST00000413219 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
SDCBP-202ENST00000413219 SLC4A10Q6U841 1118 aa21.4■■□□□ 1.02
SDCBP-202ENST00000413219 G2E3Q7L622 706 aa21.4■■□□□ 1.02
SDCBP-202ENST00000413219 CHAMP1Q96JM3 812 aa21.4■■□□□ 1.02
SDCBP-202ENST00000413219 USP31Q70CQ4 1352 aa21.39■■□□□ 1.02
SDCBP-202ENST00000413219 PEAK1Q9H792 1746 aa21.39■■□□□ 1.01
SDCBP-202ENST00000413219 DYNC1I1O14576 645 aa21.39■■□□□ 1.01
SDCBP-202ENST00000413219 MTERF4Q7Z6M4 381 aaKnown RBP21.39■■□□□ 1.01
SDCBP-202ENST00000413219 TSPYL4Q9UJ04 414 aa21.39■■□□□ 1.01
SDCBP-202ENST00000413219 ATP8B2P98198 1209 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 PALD1Q9ULE6 856 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 EXOC6BQ9Y2D4 811 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 F6X3S4 739 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 UVSSAQ2YD98 709 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 FOXD4L5Q5VV16 416 aaPredicted RBP21.38■■□□□ 1.01
SDCBP-202ENST00000413219 SASS6Q6UVJ0 657 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 FAM184AQ8NB25 1140 aa21.38■■□□□ 1.01
SDCBP-202ENST00000413219 FOXD4L4Q8WXT5 416 aaPredicted RBP21.38■■□□□ 1.01
SDCBP-202ENST00000413219 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
SDCBP-202ENST00000413219 UQCRHLA0A096LP55 91 aa21.37■■□□□ 1.01
SDCBP-202ENST00000413219 UQCRHP07919 91 aa21.37■■□□□ 1.01
SDCBP-202ENST00000413219 RTF1Q92541 710 aaKnown RBP21.37■■□□□ 1.01
SDCBP-202ENST00000413219 ANO2Q9NQ90 1003 aa21.37■■□□□ 1.01
SDCBP-202ENST00000413219 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
SDCBP-202ENST00000413219 TOPAZ1Q8N9V7 1692 aa21.36■■□□□ 1.01
SDCBP-202ENST00000413219 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
SDCBP-202ENST00000413219 TMEM87AQ8NBN3 555 aa21.36■■□□□ 1.01
SDCBP-202ENST00000413219 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
SDCBP-202ENST00000413219 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
SDCBP-202ENST00000413219 HSP90AB2PQ58FF8 381 aa21.35■■□□□ 1.01
SDCBP-202ENST00000413219 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
SDCBP-202ENST00000413219 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
SDCBP-202ENST00000413219 RNF214Q8ND24 703 aa21.35■■□□□ 1.01
SDCBP-202ENST00000413219 USP6P35125 1406 aa21.34■■□□□ 1.01
SDCBP-202ENST00000413219 KDRP35968 1356 aa21.34■■□□□ 1.01
SDCBP-202ENST00000413219 XRN1Q8IZH2 1706 aaKnown RBP21.34■■□□□ 1.01
SDCBP-202ENST00000413219 TRIM6-TRIM34B2RNG4 842 aa21.33■■□□□ 1.01
SDCBP-202ENST00000413219 TSHZ3Q63HK5 1081 aa21.33■■□□□ 1.01
SDCBP-202ENST00000413219 RILPL2Q969X0 211 aa21.33■■□□□ 1.01
SDCBP-202ENST00000413219 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
SDCBP-202ENST00000413219 PXDNLA1KZ92 1463 aa21.33■■□□□ 1.01
SDCBP-202ENST00000413219 HTATSF1O43719 755 aaKnown RBP21.33■■□□□ 1
SDCBP-202ENST00000413219 RBM10P98175 930 aaKnown RBP21.33■■□□□ 1
SDCBP-202ENST00000413219 KIAA2012Q0VF49 1180 aa21.33■■□□□ 1
SDCBP-202ENST00000413219 MTHFSDQ2M296 383 aaKnown RBP21.33■■□□□ 1
SDCBP-202ENST00000413219 MIS18AQ9NYP9 233 aa21.33■■□□□ 1
SDCBP-202ENST00000413219 ACEP12821 1306 aa21.33■■□□□ 1
SDCBP-202ENST00000413219 PTMAP06454 111 aaKnown RBP21.32■■□□□ 1
SDCBP-202ENST00000413219 FLIIQ13045 1269 aa21.32■■□□□ 1
SDCBP-202ENST00000413219 CCDC30Q5VVM6 783 aa21.32■■□□□ 1
SDCBP-202ENST00000413219 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
SDCBP-202ENST00000413219 FAM208AQ9UK61 1670 aaKnown RBP21.32■■□□□ 1
SDCBP-202ENST00000413219 PNMA6EA0A0J9YXQ4 647 aa21.32■■□□□ 1
SDCBP-202ENST00000413219 LETM1O95202 739 aaPredicted RBP21.32■■□□□ 1
SDCBP-202ENST00000413219 HSPA4P34932 840 aa21.32■■□□□ 1
SDCBP-202ENST00000413219 FAM13BQ9NYF5 915 aa21.32■■□□□ 1
SDCBP-202ENST00000413219 LRRC37A3O60309 1634 aa21.31■■□□□ 1
SDCBP-202ENST00000413219 USP48Q86UV5 1035 aa21.31■■□□□ 1
SDCBP-202ENST00000413219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.3■■□□□ 14e-6■□□□□ 10.9
SDCBP-202ENST00000413219 FMN2Q9NZ56 1722 aa21.3■■□□□ 1
SDCBP-202ENST00000413219 RPAP1Q9BWH6 1393 aaPredicted RBP21.29■■□□□ 1
SDCBP-202ENST00000413219 FOXO3O43524 673 aa21.29■■□□□ 1
SDCBP-202ENST00000413219 GADD45BO75293 160 aaPredicted RBP21.29■■□□□ 1
SDCBP-202ENST00000413219 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
SDCBP-202ENST00000413219 SBNO1A3KN83 1393 aa21.29■■□□□ 1
SDCBP-202ENST00000413219 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
SDCBP-202ENST00000413219 UPF3BQ9BZI7 483 aaKnown RBP21.28■■□□□ 1
SDCBP-202ENST00000413219 FLT4P35916 1363 aa21.28■■□□□ 1
SDCBP-202ENST00000413219 ROBO2Q9HCK4 1378 aa21.28■■□□□ 1
SDCBP-202ENST00000413219 RAB11FIP3O75154 756 aa21.28■■□□□ 1
SDCBP-202ENST00000413219 NOL8Q76FK4 1167 aaKnown RBP21.28■■□□□ 1
SDCBP-202ENST00000413219 TTC21AQ8NDW8 1320 aa21.27■■□□□ 1
SDCBP-202ENST00000413219 UNC5CLQ8IV45 518 aa21.27■■□□□ 1
SDCBP-202ENST00000413219 IGSF1Q8N6C5 1336 aa21.27■■□□□ 1
SDCBP-202ENST00000413219 SSH3Q8TE77 659 aa21.27■□□□□ 0.99
SDCBP-202ENST00000413219 BABAM1Q9NWV8 329 aa21.27■□□□□ 0.99
SDCBP-202ENST00000413219 LRRFIP2Q9Y608 721 aaKnown RBP21.27■□□□□ 0.99
SDCBP-202ENST00000413219 CACNA1FO60840 1977 aa21.27■□□□□ 0.99
SDCBP-202ENST00000413219 RAD50Q92878 1312 aa21.26■□□□□ 0.99
SDCBP-202ENST00000413219 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.25■□□□□ 0.99
SDCBP-202ENST00000413219 ZSCAN22P10073 491 aaPredicted RBP21.25■□□□□ 0.99
SDCBP-202ENST00000413219 PIBF1Q8WXW3 757 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms