RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 PXDNQ92626 1479 aa21.96■■□□□ 1.11
CROCCP2-202ENST00000412962 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
CROCCP2-202ENST00000412962 CACNA1FO60840 1977 aa21.96■■□□□ 1.11
CROCCP2-202ENST00000412962 FLIIQ13045 1269 aa21.95■■□□□ 1.1
CROCCP2-202ENST00000412962 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
CROCCP2-202ENST00000412962 KDM3BQ7LBC6 1761 aa21.95■■□□□ 1.1
CROCCP2-202ENST00000412962 CCT4P50991 539 aaKnown RBP21.94■■□□□ 1.1
CROCCP2-202ENST00000412962 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
CROCCP2-202ENST00000412962 CEP85Q6P2H3 762 aa21.94■■□□□ 1.1
CROCCP2-202ENST00000412962 MPRIPQ6WCQ1 1025 aa21.94■■□□□ 1.1
CROCCP2-202ENST00000412962 ERBB3P21860 1342 aa21.94■■□□□ 1.1
CROCCP2-202ENST00000412962 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
CROCCP2-202ENST00000412962 C1orf141Q5JVX7 400 aa21.93■■□□□ 1.1
CROCCP2-202ENST00000412962 RPAP2Q8IXW5 612 aaPredicted RBP21.93■■□□□ 1.1
CROCCP2-202ENST00000412962 TEFQ10587 303 aa21.93■■□□□ 1.1
CROCCP2-202ENST00000412962 TBC1D32Q96NH3 1257 aa21.93■■□□□ 1.1
CROCCP2-202ENST00000412962 DCTPP1Q9H773 170 aa21.93■■□□□ 1.1
CROCCP2-202ENST00000412962 HDGFL1Q5TGJ6 251 aa21.92■■□□□ 1.1
CROCCP2-202ENST00000412962 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
CROCCP2-202ENST00000412962 TNS3Q68CZ2 1445 aa21.91■■□□□ 1.1
CROCCP2-202ENST00000412962 EIF4A1P60842 406 aaKnown RBP21.91■■□□□ 1.1
CROCCP2-202ENST00000412962 RNMTO43148 476 aaKnown RBP21.9■■□□□ 1.1
CROCCP2-202ENST00000412962 BTBD11A6QL63 1104 aa21.89■■□□□ 1.1
CROCCP2-202ENST00000412962 BMP2KLQ5H9B9 411 aa21.89■■□□□ 1.1
CROCCP2-202ENST00000412962 CABLES1Q8TDN4 633 aa21.89■■□□□ 1.1
CROCCP2-202ENST00000412962 KCNQ3O43525 872 aa21.89■■□□□ 1.09
CROCCP2-202ENST00000412962 MFAP1P55081 439 aaKnown RBP21.89■■□□□ 1.09
CROCCP2-202ENST00000412962 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.09
CROCCP2-202ENST00000412962 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
CROCCP2-202ENST00000412962 OVOS2A0A0G2JMS6 1433 aa21.87■■□□□ 1.09
CROCCP2-202ENST00000412962 EIF2S2P20042 333 aaKnown RBP21.87■■□□□ 1.09
CROCCP2-202ENST00000412962 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
CROCCP2-202ENST00000412962 NLRP2Q9NX02 1062 aa21.87■■□□□ 1.09
CROCCP2-202ENST00000412962 COL18A1P39060 1754 aa21.86■■□□□ 1.09
CROCCP2-202ENST00000412962 HOXB7P09629 217 aa21.86■■□□□ 1.09
CROCCP2-202ENST00000412962 PHAXQ9H814 394 aaKnown RBP21.86■■□□□ 1.09
CROCCP2-202ENST00000412962 SPATA31A3Q5VYP0 1347 aa21.85■■□□□ 1.09
CROCCP2-202ENST00000412962 CRYBG1Q9Y4K1 1723 aa21.85■■□□□ 1.09
CROCCP2-202ENST00000412962 PXDNLA1KZ92 1463 aa21.85■■□□□ 1.09
CROCCP2-202ENST00000412962 KDM4FA0A1W2PPD8 638 aa21.84■■□□□ 1.09
CROCCP2-202ENST00000412962 GNAI2P04899 355 aa21.84■■□□□ 1.09
CROCCP2-202ENST00000412962 HMMRO75330 724 aa21.84■■□□□ 1.09
CROCCP2-202ENST00000412962 RAPGEF4Q8WZA2 1011 aa21.84■■□□□ 1.09
CROCCP2-202ENST00000412962 C22orf23Q9BZE7 217 aa21.84■■□□□ 1.09
CROCCP2-202ENST00000412962 CHRNA2Q15822 529 aa21.83■■□□□ 1.09
CROCCP2-202ENST00000412962 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.09
CROCCP2-202ENST00000412962 BRINP3Q76B58 766 aa21.83■■□□□ 1.08
CROCCP2-202ENST00000412962 BECN1Q14457 450 aa21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 PLEKHM2Q8IWE5 1019 aa21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 SIPA1L3O60292 1781 aaPredicted RBP21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 APBB1O00213 710 aa21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 GNAI3P08754 354 aa21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 CSB-PGBD3P0DP91 1061 aa21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
CROCCP2-202ENST00000412962 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
CROCCP2-202ENST00000412962 C16orf71Q8IYS4 520 aaPredicted RBP21.81■■□□□ 1.08
CROCCP2-202ENST00000412962 BRPF3Q9ULD4 1205 aa21.81■■□□□ 1.08
CROCCP2-202ENST00000412962 MEGF6O75095 1541 aa21.8■■□□□ 1.08
CROCCP2-202ENST00000412962 ABCC6O95255 1503 aa21.8■■□□□ 1.08
CROCCP2-202ENST00000412962 SMARCA5O60264 1052 aaPredicted RBP21.8■■□□□ 1.08
CROCCP2-202ENST00000412962 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
CROCCP2-202ENST00000412962 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
CROCCP2-202ENST00000412962 GSPT1P15170 499 aaKnown RBP21.78■■□□□ 1.08
CROCCP2-202ENST00000412962 OTUD7AQ8TE49 926 aaPredicted RBP21.78■■□□□ 1.08
CROCCP2-202ENST00000412962 ANXA1P04083 346 aa21.78■■□□□ 1.08
CROCCP2-202ENST00000412962 CPDO75976 1380 aa21.77■■□□□ 1.08
CROCCP2-202ENST00000412962 TBC1D9Q6ZT07 1266 aa21.77■■□□□ 1.08
CROCCP2-202ENST00000412962 USP44Q9H0E7 712 aa21.77■■□□□ 1.08
CROCCP2-202ENST00000412962 GIGYF1O75420 1035 aaPredicted RBP21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 USP35Q9P2H5 1018 aa21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 SPG7Q9UQ90 795 aa21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 LRRFIP2Q9Y608 721 aaKnown RBP21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 HEG1Q9ULI3 1381 aa21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 TTC22Q5TAA0 569 aa21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 KDM6AO15550 1401 aaPredicted RBP21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 SRCIN1Q9C0H9 1055 aa21.76■■□□□ 1.07
CROCCP2-202ENST00000412962 UBTFL1P0CB47 393 aaPredicted RBP21.75■■□□□ 1.07
CROCCP2-202ENST00000412962 PHKG2P15735 406 aa21.75■■□□□ 1.07
CROCCP2-202ENST00000412962 DBF4Q9UBU7 674 aaPredicted RBP21.75■■□□□ 1.07
CROCCP2-202ENST00000412962 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
CROCCP2-202ENST00000412962 SLAIN2Q9P270 581 aa21.75■■□□□ 1.07
CROCCP2-202ENST00000412962 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 CDC45O75419 566 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 ATP8B2P98198 1209 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 DNAAF4Q8WXU2 420 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 TBC1D2Q9BYX2 928 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 EXOC6BQ9Y2D4 811 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 PRAMEF22A3QJZ6 481 aa21.74■■□□□ 1.07
CROCCP2-202ENST00000412962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.74■■□□□ 1.071e-6■■■■□ 19.8
CROCCP2-202ENST00000412962 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
CROCCP2-202ENST00000412962 ADCY9O60503 1353 aa21.72■■□□□ 1.07
CROCCP2-202ENST00000412962 RBM25P49756 843 aaKnown RBP21.72■■□□□ 1.07
CROCCP2-202ENST00000412962 IFNL2Q8IZJ0 200 aa21.72■■□□□ 1.07
CROCCP2-202ENST00000412962 PROSER3Q2NL68 480 aa21.71■■□□□ 1.07
CROCCP2-202ENST00000412962 SOS2Q07890 1332 aaPredicted RBP21.71■■□□□ 1.07
CROCCP2-202ENST00000412962 BEND3Q5T5X7 828 aa21.71■■□□□ 1.07
CROCCP2-202ENST00000412962 PKD1L3Q7Z443 1732 aa21.71■■□□□ 1.07
CROCCP2-202ENST00000412962 SLC39A6Q13433 755 aa21.7■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms