RNA–Protein interactions for RNA: ENST00000412777.6

LRTOMT-204, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4

Gene LRTOMT, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-204ENST00000412777 MRC1P22897 1456 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
LRTOMT-204ENST00000412777 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
LRTOMT-204ENST00000412777 MAP3K5Q99683 1374 aa11.98□□□□□ -0.49
LRTOMT-204ENST00000412777 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
LRTOMT-204ENST00000412777 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
LRTOMT-204ENST00000412777 SIK1P57059 783 aa11.98□□□□□ -0.49
LRTOMT-204ENST00000412777 NFATC2IPQ8NCF5 419 aa11.98□□□□□ -0.49
LRTOMT-204ENST00000412777 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
LRTOMT-204ENST00000412777 ZNF831Q5JPB2 1677 aa11.97□□□□□ -0.49
LRTOMT-204ENST00000412777 GNAT3A8MTJ3 354 aa11.97□□□□□ -0.49
LRTOMT-204ENST00000412777 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
LRTOMT-204ENST00000412777 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
LRTOMT-204ENST00000412777 SIPA1L3O60292 1781 aaPredicted RBP11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 ITPK1Q13572 414 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 SLC4A9Q96Q91 983 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 TFCP2L1Q9NZI6 479 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
LRTOMT-204ENST00000412777 CEMIPQ8WUJ3 1361 aa11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 DLG5Q8TDM6 1919 aa11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 ATP6V1AP38606 617 aa11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 SPON1Q9HCB6 807 aa11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
LRTOMT-204ENST00000412777 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
LRTOMT-204ENST00000412777 MYH14Q7Z406 1995 aaKnown RBP11.93□□□□□ -0.5
LRTOMT-204ENST00000412777 MTFR1LQ9H019 292 aa11.93□□□□□ -0.5
LRTOMT-204ENST00000412777 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
LRTOMT-204ENST00000412777 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 PTCD1O75127 700 aaKnown RBP11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 NEFMP07197 916 aa11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 TEFQ10587 303 aa11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 AK7Q96M32 723 aa11.92□□□□□ -0.5
LRTOMT-204ENST00000412777 TJP1Q07157 1748 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 PTGER2P43116 358 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
LRTOMT-204ENST00000412777 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
LRTOMT-204ENST00000412777 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
LRTOMT-204ENST00000412777 MCM10Q7L590 875 aa11.9□□□□□ -0.5
LRTOMT-204ENST00000412777 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
LRTOMT-204ENST00000412777 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
LRTOMT-204ENST00000412777 GNPATO15228 680 aa11.89□□□□□ -0.51
LRTOMT-204ENST00000412777 SSFA2P28290 1259 aa11.89□□□□□ -0.51
LRTOMT-204ENST00000412777 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
LRTOMT-204ENST00000412777 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRTOMT-204ENST00000412777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 TTC5Q8N0Z6 440 aa11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 ADAMTS8Q9UP79 889 aa11.88□□□□□ -0.51
LRTOMT-204ENST00000412777 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 MSH5O43196 834 aa11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 ANP32CO43423 234 aa11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 PHF14O94880 888 aa11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 CRKLP46109 303 aaKnown RBP11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 PPP1R1BQ9UD71 204 aaPredicted RBP11.87□□□□□ -0.51
LRTOMT-204ENST00000412777 KCNQ3O43525 872 aa11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 CCDC184Q52MB2 194 aa11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 RUNDC1Q96C34 613 aa11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
LRTOMT-204ENST00000412777 HEG1Q9ULI3 1381 aa11.85□□□□□ -0.51
LRTOMT-204ENST00000412777 CYP19A1P11511 503 aaPredicted RBP11.85□□□□□ -0.51
LRTOMT-204ENST00000412777 RIPK4P57078 832 aa11.85□□□□□ -0.51
LRTOMT-204ENST00000412777 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
LRTOMT-204ENST00000412777 INTS5Q6P9B9 1019 aaKnown RBP11.85□□□□□ -0.51
LRTOMT-204ENST00000412777 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
LRTOMT-204ENST00000412777 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 POLD1P28340 1107 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 ARXQ96QS3 562 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 CCDC87Q9NVE4 849 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
LRTOMT-204ENST00000412777 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
LRTOMT-204ENST00000412777 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
LRTOMT-204ENST00000412777 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
LRTOMT-204ENST00000412777 RRP7AQ9Y3A4 280 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms