RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
HDAC8-210ENST00000412342 KCNQ4P56696 695 aa17.52■□□□□ 0.4
HDAC8-210ENST00000412342 CABP4P57796 275 aa17.52■□□□□ 0.4
HDAC8-210ENST00000412342 NFATC2IPQ8NCF5 419 aa17.52■□□□□ 0.4
HDAC8-210ENST00000412342 SMARCC1Q92922 1105 aaPredicted RBP17.52■□□□□ 0.4
HDAC8-210ENST00000412342 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.4
HDAC8-210ENST00000412342 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.39
HDAC8-210ENST00000412342 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
HDAC8-210ENST00000412342 TJP1Q07157 1748 aa17.51■□□□□ 0.39
HDAC8-210ENST00000412342 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
HDAC8-210ENST00000412342 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
HDAC8-210ENST00000412342 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
HDAC8-210ENST00000412342 NBPF14Q5TI25 921 aa17.5■□□□□ 0.39
HDAC8-210ENST00000412342 CCNL1Q9UK58 526 aaPredicted RBP17.5■□□□□ 0.39
HDAC8-210ENST00000412342 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
HDAC8-210ENST00000412342 KCPQ6ZWJ8 1503 aa17.5■□□□□ 0.39
HDAC8-210ENST00000412342 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
HDAC8-210ENST00000412342 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
HDAC8-210ENST00000412342 LOC102724428A0A0B4J2F2 783 aa17.48■□□□□ 0.39
HDAC8-210ENST00000412342 SIK1P57059 783 aa17.48■□□□□ 0.39
HDAC8-210ENST00000412342 NFE2L2Q16236 605 aa17.48■□□□□ 0.39
HDAC8-210ENST00000412342 SLC15A2Q16348 729 aa17.48■□□□□ 0.39
HDAC8-210ENST00000412342 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
HDAC8-210ENST00000412342 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
HDAC8-210ENST00000412342 WDR43Q15061 677 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC8-210ENST00000412342 UBR3Q6ZT12 1888 aa17.47■□□□□ 0.39
HDAC8-210ENST00000412342 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
HDAC8-210ENST00000412342 ITPK1Q13572 414 aa17.46■□□□□ 0.39
HDAC8-210ENST00000412342 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
HDAC8-210ENST00000412342 LRP5O75197 1615 aa17.46■□□□□ 0.39
HDAC8-210ENST00000412342 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
HDAC8-210ENST00000412342 MCM10Q7L590 875 aa17.45■□□□□ 0.38
HDAC8-210ENST00000412342 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
HDAC8-210ENST00000412342 PNISRQ8TF01 805 aaKnown RBP17.45■□□□□ 0.38
HDAC8-210ENST00000412342 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
HDAC8-210ENST00000412342 NEFMP07197 916 aa17.44■□□□□ 0.38
HDAC8-210ENST00000412342 SLC39A6Q13433 755 aa17.44■□□□□ 0.38
HDAC8-210ENST00000412342 LINC00116Q8NCU8 138 aa17.44■□□□□ 0.38
HDAC8-210ENST00000412342 RUNDC1Q96C34 613 aa17.44■□□□□ 0.38
HDAC8-210ENST00000412342 PDGFDQ9GZP0 370 aaPredicted RBP17.44■□□□□ 0.38
HDAC8-210ENST00000412342 MYH14Q7Z406 1995 aaKnown RBP17.43■□□□□ 0.38
HDAC8-210ENST00000412342 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
HDAC8-210ENST00000412342 TEFQ10587 303 aa17.43■□□□□ 0.38
HDAC8-210ENST00000412342 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
HDAC8-210ENST00000412342 COL24A1Q17RW2 1714 aa17.43■□□□□ 0.38
HDAC8-210ENST00000412342 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
HDAC8-210ENST00000412342 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
HDAC8-210ENST00000412342 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
HDAC8-210ENST00000412342 PTCD1O75127 700 aaKnown RBP17.41■□□□□ 0.38
HDAC8-210ENST00000412342 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
HDAC8-210ENST00000412342 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
HDAC8-210ENST00000412342 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
HDAC8-210ENST00000412342 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
HDAC8-210ENST00000412342 RIPK4P57078 832 aa17.39■□□□□ 0.37
HDAC8-210ENST00000412342 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
HDAC8-210ENST00000412342 KCNQ3O43525 872 aa17.38■□□□□ 0.37
HDAC8-210ENST00000412342 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
HDAC8-210ENST00000412342 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
HDAC8-210ENST00000412342 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
HDAC8-210ENST00000412342 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
HDAC8-210ENST00000412342 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
HDAC8-210ENST00000412342 C4AP0C0L4 1744 aa17.37■□□□□ 0.37
HDAC8-210ENST00000412342 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
HDAC8-210ENST00000412342 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
HDAC8-210ENST00000412342 DNAJC10Q8IXB1 793 aa17.36■□□□□ 0.37
HDAC8-210ENST00000412342 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
HDAC8-210ENST00000412342 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
HDAC8-210ENST00000412342 LAMB4A4D0S4 1761 aa17.35■□□□□ 0.37
HDAC8-210ENST00000412342 APAF1O14727 1248 aa17.35■□□□□ 0.37
HDAC8-210ENST00000412342 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
HDAC8-210ENST00000412342 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
HDAC8-210ENST00000412342 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
HDAC8-210ENST00000412342 SRCAPQ6ZRS2 3230 aa17.34■□□□□ 0.37
HDAC8-210ENST00000412342 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
HDAC8-210ENST00000412342 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
HDAC8-210ENST00000412342 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
HDAC8-210ENST00000412342 AK7Q96M32 723 aa17.34■□□□□ 0.37
HDAC8-210ENST00000412342 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
HDAC8-210ENST00000412342 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
HDAC8-210ENST00000412342 GNPATO15228 680 aa17.32■□□□□ 0.36
HDAC8-210ENST00000412342 ZBTB7AO95365 584 aa17.32■□□□□ 0.36
HDAC8-210ENST00000412342 SSFA2P28290 1259 aa17.32■□□□□ 0.36
HDAC8-210ENST00000412342 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
HDAC8-210ENST00000412342 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
HDAC8-210ENST00000412342 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
HDAC8-210ENST00000412342 SGIP1Q9BQI5 828 aa17.32■□□□□ 0.36
HDAC8-210ENST00000412342 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
HDAC8-210ENST00000412342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.31■□□□□ 0.36
HDAC8-210ENST00000412342 PTGER2P43116 358 aa17.31■□□□□ 0.36
HDAC8-210ENST00000412342 FLAD1Q8NFF5 587 aa17.31■□□□□ 0.36
HDAC8-210ENST00000412342 SLC16A10Q8TF71 515 aa17.31■□□□□ 0.36
HDAC8-210ENST00000412342 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
HDAC8-210ENST00000412342 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
HDAC8-210ENST00000412342 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
HDAC8-210ENST00000412342 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
HDAC8-210ENST00000412342 PHF14O94880 888 aa17.29■□□□□ 0.36
HDAC8-210ENST00000412342 SPON1Q9HCB6 807 aa17.29■□□□□ 0.36
HDAC8-210ENST00000412342 CCDC87Q9NVE4 849 aa17.29■□□□□ 0.36
HDAC8-210ENST00000412342 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
HDAC8-210ENST00000412342 ZBTB1Q9Y2K1 713 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms