RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 PIGBQ92521 554 aa12.42□□□□□ -0.42
BRCC3-207ENST00000411985 SMARCC1Q92922 1105 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-207ENST00000411985 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
BRCC3-207ENST00000411985 CHD4Q14839 1912 aa12.41□□□□□ -0.42
BRCC3-207ENST00000411985 ZBTB7AO95365 584 aa12.41□□□□□ -0.42
BRCC3-207ENST00000411985 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
BRCC3-207ENST00000411985 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-207ENST00000411985 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-207ENST00000411985 PNPLA7Q6ZV29 1317 aa12.4□□□□□ -0.42
BRCC3-207ENST00000411985 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
BRCC3-207ENST00000411985 C1orf141Q5JVX7 400 aa12.4□□□□□ -0.42
BRCC3-207ENST00000411985 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
BRCC3-207ENST00000411985 MTFR1LQ9H019 292 aa12.4□□□□□ -0.42
BRCC3-207ENST00000411985 TFCP2L1Q9NZI6 479 aa12.4□□□□□ -0.42
BRCC3-207ENST00000411985 MRC1P22897 1456 aa12.4□□□□□ -0.43
BRCC3-207ENST00000411985 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
BRCC3-207ENST00000411985 HMOX1P09601 288 aa12.39□□□□□ -0.43
BRCC3-207ENST00000411985 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
BRCC3-207ENST00000411985 PTGER2P43116 358 aa12.38□□□□□ -0.43
BRCC3-207ENST00000411985 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
BRCC3-207ENST00000411985 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
BRCC3-207ENST00000411985 CFAP53Q96M91 514 aa12.37□□□□□ -0.43
BRCC3-207ENST00000411985 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
BRCC3-207ENST00000411985 LOC102724428A0A0B4J2F2 783 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 U2SURPO15042 1029 aaKnown RBP12.36□□□□□ -0.43
BRCC3-207ENST00000411985 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 SIK1P57059 783 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 CABP4P57796 275 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 UTRNP46939 3433 aa12.36□□□□□ -0.43
BRCC3-207ENST00000411985 KIF13BQ9NQT8 1826 aa12.35□□□□□ -0.43
BRCC3-207ENST00000411985 GOLGB1Q14789 3259 aaKnown RBP12.34□□□□□ -0.43
BRCC3-207ENST00000411985 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
BRCC3-207ENST00000411985 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
BRCC3-207ENST00000411985 AK7Q96M32 723 aa12.34□□□□□ -0.43
BRCC3-207ENST00000411985 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
BRCC3-207ENST00000411985 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
BRCC3-207ENST00000411985 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
BRCC3-207ENST00000411985 FLAD1Q8NFF5 587 aa12.33□□□□□ -0.44
BRCC3-207ENST00000411985 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
BRCC3-207ENST00000411985 POLD1P28340 1107 aa12.32□□□□□ -0.44
BRCC3-207ENST00000411985 ITPK1Q13572 414 aa12.32□□□□□ -0.44
BRCC3-207ENST00000411985 ARXQ96QS3 562 aa12.32□□□□□ -0.44
BRCC3-207ENST00000411985 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
BRCC3-207ENST00000411985 NUDCQ9Y266 331 aa12.32□□□□□ -0.44
BRCC3-207ENST00000411985 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
BRCC3-207ENST00000411985 LAMB4A4D0S4 1761 aa12.31□□□□□ -0.44
BRCC3-207ENST00000411985 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
BRCC3-207ENST00000411985 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
BRCC3-207ENST00000411985 FHDC1Q9C0D6 1143 aaPredicted RBP12.31□□□□□ -0.44
BRCC3-207ENST00000411985 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
BRCC3-207ENST00000411985 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
BRCC3-207ENST00000411985 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
BRCC3-207ENST00000411985 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
BRCC3-207ENST00000411985 BRCA1P38398 1863 aaKnown RBP12.3□□□□□ -0.44
BRCC3-207ENST00000411985 PHF14O94880 888 aa12.3□□□□□ -0.44
BRCC3-207ENST00000411985 SSFA2P28290 1259 aa12.3□□□□□ -0.44
BRCC3-207ENST00000411985 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
BRCC3-207ENST00000411985 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
BRCC3-207ENST00000411985 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
BRCC3-207ENST00000411985 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
BRCC3-207ENST00000411985 KIAA1551Q9HCM1 1747 aa12.29□□□□□ -0.44
BRCC3-207ENST00000411985 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
BRCC3-207ENST00000411985 GNPATO15228 680 aa12.29□□□□□ -0.44
BRCC3-207ENST00000411985 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
BRCC3-207ENST00000411985 AMIGO3Q86WK7 504 aa12.29□□□□□ -0.44
BRCC3-207ENST00000411985 SYT17Q9BSW7 474 aa12.29□□□□□ -0.44
BRCC3-207ENST00000411985 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
BRCC3-207ENST00000411985 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
BRCC3-207ENST00000411985 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
BRCC3-207ENST00000411985 U2AF1L5P0DN76 240 aaPredicted RBP12.28□□□□□ -0.44
BRCC3-207ENST00000411985 U2AF1Q01081 240 aaKnown RBP eCLIP12.28□□□□□ -0.44
BRCC3-207ENST00000411985 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
BRCC3-207ENST00000411985 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
BRCC3-207ENST00000411985 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
BRCC3-207ENST00000411985 FCHSD2O94868 740 aa12.27□□□□□ -0.45
BRCC3-207ENST00000411985 MSL1Q68DK7 614 aa12.27□□□□□ -0.45
BRCC3-207ENST00000411985 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
BRCC3-207ENST00000411985 CAPN15O75808 1086 aa12.26□□□□□ -0.45
BRCC3-207ENST00000411985 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-207ENST00000411985 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-207ENST00000411985 RALBP1Q15311 655 aa12.26□□□□□ -0.45
BRCC3-207ENST00000411985 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
BRCC3-207ENST00000411985 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
BRCC3-207ENST00000411985 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
BRCC3-207ENST00000411985 PHACTR3Q96KR7 559 aa12.26□□□□□ -0.45
BRCC3-207ENST00000411985 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
BRCC3-207ENST00000411985 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
BRCC3-207ENST00000411985 TEFQ10587 303 aa12.25□□□□□ -0.45
BRCC3-207ENST00000411985 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
BRCC3-207ENST00000411985 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
BRCC3-207ENST00000411985 CRKLP46109 303 aaKnown RBP12.24□□□□□ -0.45
BRCC3-207ENST00000411985 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
BRCC3-207ENST00000411985 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
BRCC3-207ENST00000411985 NRXN2Q9P2S2 1712 aa12.24□□□□□ -0.45
BRCC3-207ENST00000411985 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
BRCC3-207ENST00000411985 ARFGEF1Q9Y6D6 1849 aa12.24□□□□□ -0.45
BRCC3-207ENST00000411985 RPS6KA4O75676 772 aa12.23□□□□□ -0.45
BRCC3-207ENST00000411985 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms